RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 NDUFS6O75380 124 aaKnown RBP8.12□□□□□ -1.11
GPNMB-201ENST00000258733 APOA4P06727 396 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 DBTP11182 482 aaKnown RBP8.12□□□□□ -1.11
GPNMB-201ENST00000258733 CCNA2P20248 432 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 GSTM2P28161 218 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 ST13P50502 369 aaKnown RBP8.12□□□□□ -1.11
GPNMB-201ENST00000258733 TFAP4Q01664 338 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 FUT2Q10981 343 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 ACAP2Q15057 778 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 SUPT20HL1Q3ZLR7 823 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 PIK3AP1Q6ZUJ8 805 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 VSTM4Q8IW00 320 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 PM20D2Q8IYS1 436 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 TOE1Q96GM8 510 aaKnown RBP8.12□□□□□ -1.11
GPNMB-201ENST00000258733 PHF12Q96QT6 1004 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 SDF4Q9BRK5 362 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 MLPHQ9BV36 600 aaPredicted RBP8.12□□□□□ -1.11
GPNMB-201ENST00000258733 CLPBQ9H078 707 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 LIN7BQ9HAP6 207 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 MAN1C1Q9NR34 630 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 ZNF69Q9UC07 566 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 SETBP1Q9Y6X0 1596 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 C15orf38-AP3S2A0A0A6YYH1 394 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 PRR23AA6NEV1 266 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 HOXC11O43248 304 aaPredicted RBP8.11□□□□□ -1.11
GPNMB-201ENST00000258733 LRRN2O75325 713 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 ALDH1L1O75891 902 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 RSL1D1O76021 490 aaKnown RBP8.11□□□□□ -1.11
GPNMB-201ENST00000258733 OR6B1O95007 311 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 CD4P01730 458 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 ITGA2P17301 1181 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 DRD4P21917 467 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 ACAT1P24752 427 aaKnown RBP8.11□□□□□ -1.11
GPNMB-201ENST00000258733 PKLRP30613 574 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 HOXC12P31275 282 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 PPM1FP49593 454 aaPredicted RBP8.11□□□□□ -1.11
GPNMB-201ENST00000258733 SEC13P55735 322 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 POU6F2P78424 691 aaPredicted RBP8.11□□□□□ -1.11
GPNMB-201ENST00000258733 ZACNQ401N2 412 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 SPATS1Q496A3 300 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 FAM83BQ5T0W9 1011 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 HAUS3Q68CZ6 603 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 KIAA1841Q6NSI8 718 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 TMEM139Q8IV31 216 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 ADAMTS16Q8TE57 1224 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 LPGAT1Q92604 370 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 THAP11Q96EK4 314 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 ZIM3Q96PE6 472 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 RAB3IPQ96QF0 476 aaPredicted RBP8.11□□□□□ -1.11
GPNMB-201ENST00000258733 PANX2Q96RD6 677 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 C17orf80Q9BSJ5 609 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 ZNF717Q9BY31 904 aaPredicted RBP8.11□□□□□ -1.11
GPNMB-201ENST00000258733 INTS2Q9H0H0 1204 aaKnown RBP8.11□□□□□ -1.11
GPNMB-201ENST00000258733 RHBGQ9H310 441 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 TUFT1Q9NNX1 390 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 TBC1D23Q9NUY8 699 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 ADGRE2Q9UHX3 823 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 VPS4AQ9UN37 437 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 SMG5Q9UPR3 1016 aaKnown RBP8.11□□□□□ -1.11
GPNMB-201ENST00000258733 POLR3AO14802 1390 aaPredicted RBP8.11□□□□□ -1.11
GPNMB-201ENST00000258733 PASKQ96RG2 1323 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 SYNJ2BP-COX16A0A087WUM0 186 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.11□□□□□ -1.11
GPNMB-201ENST00000258733 CCDC78A2IDD5 438 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 A8MVJ9 347 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 SCO2O43819 266 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 GTPBP6O43824 516 aaPredicted RBP8.11□□□□□ -1.11
GPNMB-201ENST00000258733 USP1O94782 785 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 UBOX5O94941 541 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 ATF4P18848 351 aaPredicted RBP8.11□□□□□ -1.11
GPNMB-201ENST00000258733 KRT2P35908 639 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 CACNB3P54284 484 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 NCAPHQ15003 741 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 DUPD1Q68J44 220 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 ALG1LQ6GMV1 187 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 TMC5Q6UXY8 1006 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 RHOUQ7L0Q8 258 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 SATL1Q86VE3 508 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 AOPEPQ8N6M6 819 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 ANKRD42Q8N9B4 389 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 OTUD7AQ8TE49 926 aaPredicted RBP8.11□□□□□ -1.11
GPNMB-201ENST00000258733 PPP1R36Q96LQ0 422 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 DUSP12Q9UNI6 340 aa8.11□□□□□ -1.11
GPNMB-201ENST00000258733 ZNF142P52746 1687 aaPredicted RBP8.11□□□□□ -1.11
GPNMB-201ENST00000258733 WDR19Q8NEZ3 1342 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 K7EPI3 171 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 BACH1O14867 736 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 VILLO15195 856 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 ADCY6O43306 1168 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 TMEM127O75204 238 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 MICAL2O94851 1124 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 KRT5P13647 590 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 STX2P32856 288 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 SHMT1P34896 483 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 PHKA1P46020 1223 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 ARSDP51689 593 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 EEF1A1P68104 462 aaKnown RBP8.1□□□□□ -1.11
GPNMB-201ENST00000258733 PLIN5Q00G26 463 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 EEF1A2Q05639 463 aaKnown RBP8.1□□□□□ -1.11
GPNMB-201ENST00000258733 TRPC3Q13507 836 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms