RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 PGBD4Q96DM1 585 aa16.15■□□□□ 0.18
HDHD3-201ENST00000238379 BTBD6Q96KE9 485 aa16.15■□□□□ 0.18
HDHD3-201ENST00000238379 RPGRIP1Q96KN7 1286 aa16.15■□□□□ 0.18
HDHD3-201ENST00000238379 RGS18Q9NS28 235 aa16.15■□□□□ 0.18
HDHD3-201ENST00000238379 RNF14Q9UBS8 474 aa16.15■□□□□ 0.18
HDHD3-201ENST00000238379 DDX3YO15523 660 aaKnown RBP16.15■□□□□ 0.18
HDHD3-201ENST00000238379 MICAL2O94851 1124 aa16.15■□□□□ 0.18
HDHD3-201ENST00000238379 TUBB4BP68371 445 aa16.15■□□□□ 0.18
HDHD3-201ENST00000238379 RNF169Q8NCN4 708 aa16.15■□□□□ 0.18
HDHD3-201ENST00000238379 ANKRD7Q92527 254 aa16.15■□□□□ 0.18
HDHD3-201ENST00000238379 RABGGTAQ92696 567 aa16.15■□□□□ 0.18
HDHD3-201ENST00000238379 MS4A14Q96JA4 679 aa16.15■□□□□ 0.18
HDHD3-201ENST00000238379 TRIM7Q9C029 511 aa16.15■□□□□ 0.18
HDHD3-201ENST00000238379 UBN1Q9NPG3 1134 aa16.15■□□□□ 0.18
HDHD3-201ENST00000238379 SMARCAL1Q9NZC9 954 aa16.15■□□□□ 0.18
HDHD3-201ENST00000238379 EHD2Q9NZN4 543 aa16.15■□□□□ 0.18
HDHD3-201ENST00000238379 CACNG4Q9UBN1 327 aa16.15■□□□□ 0.18
HDHD3-201ENST00000238379 CYTH4Q9UIA0 394 aa16.15■□□□□ 0.18
HDHD3-201ENST00000238379 L1RE1Q9UN81 338 aa16.15■□□□□ 0.18
HDHD3-201ENST00000238379 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.15■□□□□ 0.18
HDHD3-201ENST00000238379 TCRBV5S1A1TA0A578 114 aa16.14■□□□□ 0.17
HDHD3-201ENST00000238379 TMEM110-MUSTN1A8MSY1 372 aa16.14■□□□□ 0.17
HDHD3-201ENST00000238379 C9IYK1 514 aa16.14■□□□□ 0.17
HDHD3-201ENST00000238379 CALB1P05937 261 aa16.14■□□□□ 0.17
HDHD3-201ENST00000238379 FGFR1P11362 822 aa16.14■□□□□ 0.17
HDHD3-201ENST00000238379 COMTP21964 271 aa16.14■□□□□ 0.17
HDHD3-201ENST00000238379 IGFBP6P24592 240 aaPredicted RBP16.14■□□□□ 0.17
HDHD3-201ENST00000238379 ITIH3Q06033 890 aa16.14■□□□□ 0.17
HDHD3-201ENST00000238379 GPNMBQ14956 572 aa16.14■□□□□ 0.17
HDHD3-201ENST00000238379 LCLAT1Q6UWP7 414 aa16.14■□□□□ 0.17
HDHD3-201ENST00000238379 DPH6Q7L8W6 267 aa16.14■□□□□ 0.17
HDHD3-201ENST00000238379 ACOT1Q86TX2 421 aa16.14■□□□□ 0.17
HDHD3-201ENST00000238379 ERICH1Q86X53 443 aa16.14■□□□□ 0.17
HDHD3-201ENST00000238379 C12orf29Q8N999 325 aa16.14■□□□□ 0.17
HDHD3-201ENST00000238379 NOA1Q8NC60 698 aaKnown RBP16.14■□□□□ 0.17
HDHD3-201ENST00000238379 OR6B3Q8NGW1 331 aa16.14■□□□□ 0.17
HDHD3-201ENST00000238379 UBE2Q2Q8WVN8 375 aa16.14■□□□□ 0.17
HDHD3-201ENST00000238379 LINC01599Q8WXQ3 324 aa16.14■□□□□ 0.17
HDHD3-201ENST00000238379 PBKQ96KB5 322 aa16.14■□□□□ 0.17
HDHD3-201ENST00000238379 MRPL47Q9HD33 250 aaKnown RBP16.14■□□□□ 0.17
HDHD3-201ENST00000238379 ANAPC7Q9UJX3 599 aa16.14■□□□□ 0.17
HDHD3-201ENST00000238379 A8MXQ7 604 aa16.13■□□□□ 0.17
HDHD3-201ENST00000238379 PAFAH1B1P43034 410 aa16.13■□□□□ 0.17
HDHD3-201ENST00000238379 GPD2P43304 727 aa16.13■□□□□ 0.17
HDHD3-201ENST00000238379 MNX1P50219 401 aaPredicted RBP16.13■□□□□ 0.17
HDHD3-201ENST00000238379 BFSP2Q13515 415 aa16.13■□□□□ 0.17
HDHD3-201ENST00000238379 CFAP221Q4G0U5 840 aa16.13■□□□□ 0.17
HDHD3-201ENST00000238379 PTPN20Q4JDL3 420 aa16.13■□□□□ 0.17
HDHD3-201ENST00000238379 CCDC181Q5TID7 509 aa16.13■□□□□ 0.17
HDHD3-201ENST00000238379 SLC24A5Q71RS6 500 aa16.13■□□□□ 0.17
HDHD3-201ENST00000238379 CRYBG2Q8N1P7 616 aa16.13■□□□□ 0.17
HDHD3-201ENST00000238379 APPL2Q8NEU8 664 aa16.13■□□□□ 0.17
HDHD3-201ENST00000238379 CD101Q93033 1021 aa16.13■□□□□ 0.17
HDHD3-201ENST00000238379 CRISPLD2Q9H0B8 497 aa16.13■□□□□ 0.17
HDHD3-201ENST00000238379 PARVAQ9NVD7 372 aa16.13■□□□□ 0.17
HDHD3-201ENST00000238379 SCINQ9Y6U3 715 aa16.13■□□□□ 0.17
HDHD3-201ENST00000238379 MIF4GDA9UHW6 222 aaKnown RBP16.12■□□□□ 0.17
HDHD3-201ENST00000238379 INPPL1O15357 1258 aa16.12■□□□□ 0.17
HDHD3-201ENST00000238379 HCRTO43612 131 aa16.12■□□□□ 0.17
HDHD3-201ENST00000238379 HUS1O60921 280 aa16.12■□□□□ 0.17
HDHD3-201ENST00000238379 RPL9P32969 192 aaKnown RBP16.12■□□□□ 0.17
HDHD3-201ENST00000238379 GNL1P36915 607 aaPredicted RBP16.12■□□□□ 0.17
HDHD3-201ENST00000238379 CLCNKBP51801 687 aa16.12■□□□□ 0.17
HDHD3-201ENST00000238379 FAM189BP81408 668 aa16.12■□□□□ 0.17
HDHD3-201ENST00000238379 STILQ15468 1287 aa16.12■□□□□ 0.17
HDHD3-201ENST00000238379 CPNE8Q86YQ8 564 aa16.12■□□□□ 0.17
HDHD3-201ENST00000238379 PDCL2Q8N4E4 241 aa16.12■□□□□ 0.17
HDHD3-201ENST00000238379 TOP6BLQ8N6T0 577 aa16.12■□□□□ 0.17
HDHD3-201ENST00000238379 SPATA4Q8NEY3 305 aa16.12■□□□□ 0.17
HDHD3-201ENST00000238379 EPC1Q9H2F5 836 aa16.12■□□□□ 0.17
HDHD3-201ENST00000238379 TSPAN16Q9UKR8 245 aa16.12■□□□□ 0.17
HDHD3-201ENST00000238379 M0QYV0 167 aa16.12■□□□□ 0.17
HDHD3-201ENST00000238379 PITPNM1O00562 1244 aa16.12■□□□□ 0.17
HDHD3-201ENST00000238379 PODXLO00592 558 aa16.12■□□□□ 0.17
HDHD3-201ENST00000238379 NBNO60934 754 aa16.12■□□□□ 0.17
HDHD3-201ENST00000238379 EOMESO95936 686 aa16.12■□□□□ 0.17
HDHD3-201ENST00000238379 POMCP01189 267 aa16.12■□□□□ 0.17
HDHD3-201ENST00000238379 FAM163BP0C2L3 166 aa16.12■□□□□ 0.17
HDHD3-201ENST00000238379 IBSPP21815 317 aaPredicted RBP16.12■□□□□ 0.17
HDHD3-201ENST00000238379 LMO2P25791 158 aa16.12■□□□□ 0.17
HDHD3-201ENST00000238379 PPP1R26Q5T8A7 1209 aaPredicted RBP16.12■□□□□ 0.17
HDHD3-201ENST00000238379 ADGRF2Q8IZF7 708 aa16.12■□□□□ 0.17
HDHD3-201ENST00000238379 GPR161Q8N6U8 529 aaKnown RBP16.12■□□□□ 0.17
HDHD3-201ENST00000238379 DNAJC5GQ8N7S2 189 aa16.12■□□□□ 0.17
HDHD3-201ENST00000238379 ALG3Q92685 438 aa16.12■□□□□ 0.17
HDHD3-201ENST00000238379 CPXM1Q96SM3 734 aa16.12■□□□□ 0.17
HDHD3-201ENST00000238379 PAAF1Q9BRP4 392 aa16.12■□□□□ 0.17
HDHD3-201ENST00000238379 DPEP3Q9H4B8 488 aa16.12■□□□□ 0.17
HDHD3-201ENST00000238379 MYO1FO00160 1098 aa16.11■□□□□ 0.17
HDHD3-201ENST00000238379 CYB561D2O14569 222 aa16.11■□□□□ 0.17
HDHD3-201ENST00000238379 CEP104O60308 925 aa16.11■□□□□ 0.17
HDHD3-201ENST00000238379 PQBP1O60828 265 aaKnown RBP16.11■□□□□ 0.17
HDHD3-201ENST00000238379 GJB6O95452 261 aa16.11■□□□□ 0.17
HDHD3-201ENST00000238379 PFKMP08237 780 aa16.11■□□□□ 0.17
HDHD3-201ENST00000238379 PDGFRBP09619 1106 aa16.11■□□□□ 0.17
HDHD3-201ENST00000238379 WARSP23381 471 aaKnown RBP16.11■□□□□ 0.17
HDHD3-201ENST00000238379 PEX5P50542 639 aa16.11■□□□□ 0.17
HDHD3-201ENST00000238379 GRIK3Q13003 919 aa16.11■□□□□ 0.17
HDHD3-201ENST00000238379 UPP1Q16831 310 aa16.11■□□□□ 0.17
HDHD3-201ENST00000238379 PKDCCQ504Y2 493 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms