RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 RALAP11233 206 aa10.56□□□□□ -0.72
USP11-201ENST00000218348 AMHR2Q16671 573 aa10.56□□□□□ -0.72
USP11-201ENST00000218348 MAP3K21Q5TCX8 1036 aa10.56□□□□□ -0.72
USP11-201ENST00000218348 CCDC62Q6P9F0 684 aa10.56□□□□□ -0.72
USP11-201ENST00000218348 ANKS1BQ7Z6G8 1248 aa10.56□□□□□ -0.72
USP11-201ENST00000218348 BRSK2Q8IWQ3 736 aa10.56□□□□□ -0.72
USP11-201ENST00000218348 ARMC2Q8NEN0 867 aa10.56□□□□□ -0.72
USP11-201ENST00000218348 KCNV2Q8TDN2 545 aa10.56□□□□□ -0.72
USP11-201ENST00000218348 MRRFQ96E11 262 aaKnown RBP10.56□□□□□ -0.72
USP11-201ENST00000218348 ERP44Q9BS26 406 aa10.56□□□□□ -0.72
USP11-201ENST00000218348 CDT1Q9H211 546 aa10.56□□□□□ -0.72
USP11-201ENST00000218348 SYNCQ9H7C4 482 aa10.56□□□□□ -0.72
USP11-201ENST00000218348 SAE1Q9UBE0 346 aaPredicted RBP10.56□□□□□ -0.72
USP11-201ENST00000218348 NOVA2Q9UNW9 492 aaKnown RBP10.56□□□□□ -0.72
USP11-201ENST00000218348 GRAP2O75791 330 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 ERLIN2O94905 339 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 IRF5Q13568 498 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 CCDC38Q502W7 563 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 PHC3Q8NDX5 983 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 UBA3Q8TBC4 463 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 WHAMMQ8TF30 809 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 CAPS2Q9BXY5 557 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 SMYD3Q9H7B4 428 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 LACTBL1A8MY62 500 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 DYNC1LI2O43237 492 aaPredicted RBP10.55□□□□□ -0.72
USP11-201ENST00000218348 HSPA8P11142 646 aaKnown RBP10.55□□□□□ -0.72
USP11-201ENST00000218348 SEC24CP53992 1094 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 NOMO3P69849 1222 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 NKX3-2P78367 333 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 PPFIA1Q13136 1202 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 MAP2K5Q13163 448 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 RBBP5Q15291 538 aaKnown RBP10.55□□□□□ -0.72
USP11-201ENST00000218348 SYCP2LQ5T4T6 812 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 C11orf63Q6NUN7 778 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 SESTD1Q86VW0 696 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 KIAA0319LQ8IZA0 1049 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 TRPV1Q8NER1 839 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 WNT8AQ9H1J5 351 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 SEMA4AQ9H3S1 761 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 SLITRK6Q9H5Y7 841 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 ZWILCHQ9H900 591 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 RPF1Q9H9Y2 349 aaKnown RBP10.55□□□□□ -0.72
USP11-201ENST00000218348 PPANQ9NQ55 473 aaKnown RBP10.55□□□□□ -0.72
USP11-201ENST00000218348 ERAP1Q9NZ08 941 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 PCSK1NQ9UHG2 260 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 TTC7AQ9ULT0 858 aaPredicted RBP10.55□□□□□ -0.72
USP11-201ENST00000218348 MIF4GDA9UHW6 222 aaKnown RBP10.55□□□□□ -0.72
USP11-201ENST00000218348 ACSL3O95573 720 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 IVLP07476 585 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 PYGBP11216 843 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 CCT5P48643 541 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 EFNA5P52803 228 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 PLCB3Q01970 1234 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 MXD4Q14582 209 aaPredicted RBP10.55□□□□□ -0.72
USP11-201ENST00000218348 LIN9Q5TKA1 542 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 JADE1Q6IE81 842 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 FAM167AQ96KS9 214 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 NAP1L3Q99457 506 aaPredicted RBP10.55□□□□□ -0.72
USP11-201ENST00000218348 LPIN3Q9BQK8 851 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 CHCHD3Q9NX63 227 aaKnown RBP10.55□□□□□ -0.72
USP11-201ENST00000218348 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.55□□□□□ -0.72
USP11-201ENST00000218348 MTUS1Q9ULD2 1270 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 PCDHA3Q9Y5H8 950 aa10.55□□□□□ -0.72
USP11-201ENST00000218348 LAMA3Q16787 3333 aa10.54□□□□□ -0.72
USP11-201ENST00000218348 PHF2O75151 1096 aa10.54□□□□□ -0.72
USP11-201ENST00000218348 TNNC2P02585 160 aa10.54□□□□□ -0.72
USP11-201ENST00000218348 STAG3L1P0CL83 205 aa10.54□□□□□ -0.72
USP11-201ENST00000218348 POU5F1Q01860 360 aaKnown RBP10.54□□□□□ -0.72
USP11-201ENST00000218348 SP3Q02447 781 aa10.54□□□□□ -0.72
USP11-201ENST00000218348 ARHGAP1Q07960 439 aa10.54□□□□□ -0.72
USP11-201ENST00000218348 MAMLD1Q13495 774 aa10.54□□□□□ -0.72
USP11-201ENST00000218348 CUL1Q13616 776 aa10.54□□□□□ -0.72
USP11-201ENST00000218348 CCL14Q16627 93 aa10.54□□□□□ -0.72
USP11-201ENST00000218348 ALS2CLQ60I27 953 aa10.54□□□□□ -0.72
USP11-201ENST00000218348 DENND1BQ6P3S1 775 aa10.54□□□□□ -0.72
USP11-201ENST00000218348 MPZL3Q6UWV2 235 aa10.54□□□□□ -0.72
USP11-201ENST00000218348 GSTA5Q7RTV2 222 aa10.54□□□□□ -0.72
USP11-201ENST00000218348 MSL3Q8N5Y2 521 aaKnown RBP10.54□□□□□ -0.72
USP11-201ENST00000218348 MDM1Q8TC05 714 aa10.54□□□□□ -0.72
USP11-201ENST00000218348 BCAS4Q8TDM0 211 aa10.54□□□□□ -0.72
USP11-201ENST00000218348 TCP11Q8WWU5 503 aa10.54□□□□□ -0.72
USP11-201ENST00000218348 TWNKQ96RR1 684 aa10.54□□□□□ -0.72
USP11-201ENST00000218348 UVRAGQ9P2Y5 699 aa10.54□□□□□ -0.72
USP11-201ENST00000218348 PCDHGA4Q9Y5G9 962 aa10.54□□□□□ -0.72
USP11-201ENST00000218348 STYXL1Q9Y6J8 313 aa10.54□□□□□ -0.72
USP11-201ENST00000218348 LOXHD1Q8IVV2 1947 aa10.54□□□□□ -0.72
USP11-201ENST00000218348 H3BRB1 525 aa10.54□□□□□ -0.72
USP11-201ENST00000218348 SNUPNO95149 360 aaKnown RBP10.54□□□□□ -0.72
USP11-201ENST00000218348 MYZAPP0CAP1 466 aa10.54□□□□□ -0.72
USP11-201ENST00000218348 ZNF865P0CJ78 1059 aaPredicted RBP10.54□□□□□ -0.72
USP11-201ENST00000218348 COILP38432 576 aaPredicted RBP10.54□□□□□ -0.72
USP11-201ENST00000218348 IRAK1P51617 712 aa10.54□□□□□ -0.72
USP11-201ENST00000218348 CCNA1P78396 465 aa10.54□□□□□ -0.72
USP11-201ENST00000218348 KRT17Q04695 432 aa10.54□□□□□ -0.72
USP11-201ENST00000218348 TMC3Q7Z5M5 1100 aa10.54□□□□□ -0.72
USP11-201ENST00000218348 LRRN4Q8WUT4 740 aa10.54□□□□□ -0.72
USP11-201ENST00000218348 RAB17Q9H0T7 212 aa10.54□□□□□ -0.72
USP11-201ENST00000218348 TUT1Q9H6E5 874 aaKnown RBP10.54□□□□□ -0.72
USP11-201ENST00000218348 CES2O00748 559 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 KIAA0391O15091 583 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms