RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Chordc1Q9D1P4 331 aaKnown RBP10.54□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Cnot8Q9D8X5 292 aa10.54□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Ankrd2Q9WV06 328 aa10.54□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Slc23a4A0A0J9YUX7 615 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Gm27029A2A4P4 543 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Ttc17E9PVB5 1198 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 YwhahP68510 246 aaKnown RBP10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Capza3P70190 299 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Nhej1Q3KNJ2 295 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Cntn2Q61330 1040 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 TfrcQ62351 763 aaKnown RBP10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Gpsm1Q6IR34 673 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Olfr412Q7TRW7 312 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Ankrd45Q810N6 248 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Kif2bQ8C0N1 668 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Pip4k2cQ91XU3 421 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Cwh43Q91YL7 699 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Dbndd2Q9CRD4 158 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Stx17Q9D0I4 301 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Rab13Q9DD03 202 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Iigp1Q9QZ85 413 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 ZfxP17012 799 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Sh3bp2Q06649 559 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Ppp1r12cQ3UMT1 782 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Znf235Q61116 645 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Psmd5Q8BJY1 504 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Nop53Q8BK35 484 aaKnown RBP10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Pyhin1Q8BV49 420 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Tph2Q8CGV2 488 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Tbc1d19Q8VDV7 526 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Pcdha11Q91Y19 950 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Dph5Q9CWQ0 281 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Med7Q9CZB6 233 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Q9D9D9 101 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Peg12Q9WVA7 283 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Gm5483B2RV77 97 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 P04214 136 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Slc10a3P21129 473 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 LipeP54310 759 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Abi2P62484 446 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Ect2Q07139 913 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Krt35Q497I4 455 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Cyp2c66Q5GLZ0 490 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Znf512Q69Z99 562 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Olfr1415Q7TQS4 311 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Olfr1416Q8VGU4 312 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Rassf7Q9DD19 359 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Elf2Q9JHC9 593 aa10.53□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Ms4a14A0A087WSD2 1232 aa10.52□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Gm13212B1ASQ7 799 aa10.52□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Gm2030D3Z7C4 212 aa10.52□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Lmod3E9QA62 571 aa10.52□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Top6blJ3QMY9 579 aa10.52□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Ap5z1Q3U829 807 aa10.52□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Rbm20Q3UQS8 1199 aaKnown RBP10.52□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 PostnQ62009 838 aa10.52□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Krit1Q6S5J6 736 aa10.52□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Lrfn2Q80TG9 788 aa10.52□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 WhrnQ80VW5 918 aa10.52□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Lrch3Q8BVU0 778 aa10.52□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Rhpn2Q8BWR8 686 aa10.52□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Ddx50Q99MJ9 734 aaKnown RBP10.52□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Rpl17Q9CPR4 184 aaKnown RBP10.52□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Cfap57Q9D180 1249 aa10.52□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Cables1Q9ESJ1 568 aa10.52□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Stk4Q9JI11 487 aa10.52□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Adamts9E9PUN6 1931 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Cep290Q6A078 2472 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Olfr1023A2ASU6 311 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Gm8994E9PV04 411 aaKnown RBP10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Apol11aE9PZG0 334 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Gm1661E9Q963 441 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 RabggtbP53612 339 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Lman2lP59481 347 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 GaltQ03249 379 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Trip13Q3UA06 432 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Nxf2Q4ZGD8 691 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 CttnQ60598 546 aaKnown RBP10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Tbc1d31Q6NXY1 996 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Rad9bQ6WBX7 403 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Zfyve28Q6ZPK7 905 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Cfap97Q6ZPR1 541 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Fut11Q8BHC9 489 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Ttc16Q8C1F5 767 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Dusp19Q8K4T5 220 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Cul2Q9D4H8 745 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Trp53inp1Q9QXE4 239 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 NumbQ9QZS3 653 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Epm2aQ9WUA5 330 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Acp4D3YTS9 425 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Ifnb1P01575 182 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Nlrc4Q3UP24 1024 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Tmtc1Q3UV71 942 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Acvrl1Q61288 502 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Thnsl1Q8BH55 747 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Etf1Q8BWY3 437 aaKnown RBP10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Dis3lQ8C0S1 1053 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Tmem145Q8C4U2 746 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Rbm34Q8C5L7 375 aaKnown RBP10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Pnma3Q8JZW8 466 aa10.52□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms