RNA–Protein interactions for RNA: ENSMUST00000088790.8

Ret-202, Transcript of Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ret, Length 4,497 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ret-202ENSMUST00000088790 Fam198aQ3UY90 562 aa16.61■□□□□ 0.25
Ret-202ENSMUST00000088790 Dph1Q5NCQ5 438 aa16.61■□□□□ 0.25
Ret-202ENSMUST00000088790 Polr2eQ80UW8 210 aaKnown RBP16.61■□□□□ 0.25
Ret-202ENSMUST00000088790 Nim1kQ8BHI9 436 aa16.61■□□□□ 0.25
Ret-202ENSMUST00000088790 Mrpl47Q8K2Y7 252 aa16.61■□□□□ 0.25
Ret-202ENSMUST00000088790 Ap2b1Q9DBG3 937 aa16.61■□□□□ 0.25
Ret-202ENSMUST00000088790 Edf1Q9JMG1 148 aaKnown RBP16.61■□□□□ 0.25
Ret-202ENSMUST00000088790 Ifi206G3UZV2 921 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 GsapQ3TCV3 858 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 Ssxb5Q6XAS2 159 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 Kcnt1Q6ZPR4 1224 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 Lrfn2Q80TG9 788 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 SybuQ8BHS8 665 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 Phc3Q8CHP6 981 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 Gm8113E0CXS8 587 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 Top3aO70157 1003 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 Rag1P15919 1040 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 CblP22682 913 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 PdgfraP26618 1089 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 LeprP48356 1162 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 PoliQ6R3M4 717 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 Pdk1Q8BFP9 434 aaKnown RBP16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 Rmnd1Q8CI78 450 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 Snx9Q91VH2 595 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 Ppp1r3aQ99MR9 1089 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 Znf654Q9DAU9 571 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 Tjap1Q9DCD5 539 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 Hnrnph3D3Z3N4 346 aaKnown RBP16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 Apol11bE9PUZ0 337 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 Phactr1Q2M3X8 580 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 Chi3l1Q61362 389 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 LbpQ61805 481 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 3830417A13RikQ8BQJ2 303 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 Znf445Q8R2V3 986 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 RnpepQ8VCT3 650 aaKnown RBP16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 Tex9Q9D845 387 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 Grk1Q9WVL4 564 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 Tll2Q9WVM6 1012 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 Znf609Q8BZ47 1413 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 Fam205a1D3YZF6 1314 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 BhmtO35490 407 aaKnown RBP16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 Wdr36Q3TAQ9 899 aaKnown RBP16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 Creb3Q61817 404 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 Pkn2Q8BWW9 983 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 Pcdhb1Q91Y08 818 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 Atp11cQ9QZW0 1129 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 Capn7Q9R1S8 813 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 Robo1O89026 1612 aa16.6■□□□□ 0.25
Ret-202ENSMUST00000088790 2210011C24RikA0A087WQ89 206 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Apol8A2VDH7 339 aaKnown RBP16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Pdzrn4E9PUZ9 1014 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Klc2O88448 599 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Mmp14P53690 582 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Nrbf2Q8VCQ3 287 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 PmpcbQ9CXT8 489 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Pnpla6Q3TRM4 1355 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Nfat5Q9WV30 1534 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Rabgap1lA6H6A9 815 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Scgb2b7D3YYY1 112 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Neurl1bQ0MW30 546 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Ccdc127Q3TC33 260 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 PnocQ64387 187 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Gramd1bQ80TI0 738 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Gpr150Q8BL07 427 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Suds3Q8BR65 328 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Kct2Q8K201 259 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 HpdlQ8K248 371 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 TrabdQ99JY4 376 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Hars2Q99KK9 505 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Fgfr1op2Q9CRA9 253 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Chit1Q9D7Q1 464 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 ErmapQ9JLN5 566 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Gm36028A0A0U1RPM1 299 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Gm7086A0A1W2P766 342 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Myl2P51667 166 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Ppp3caP63328 521 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Fdxacb1Q3UY23 622 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Zfyve28Q6ZPK7 905 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Lsm8Q6ZWM4 96 aaKnown RBP16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 HyiQ8R1F5 277 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Ero1bQ8R2E9 467 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Mccc1Q99MR8 717 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Syf2Q9D198 242 aaKnown RBP16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 PodxlQ9R0M4 503 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Ppargc1aO70343 797 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Kctd19Q562E2 927 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Frmd5Q6P5H6 517 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 D630039A03RikQ8K0M7 236 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Trpv6Q91WD2 767 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 Slfn14V9GXG1 899 aa16.59■□□□□ 0.25
Ret-202ENSMUST00000088790 C2cd2E9Q3C1 696 aa16.58■□□□□ 0.25
Ret-202ENSMUST00000088790 ClgnP52194 611 aa16.58■□□□□ 0.25
Ret-202ENSMUST00000088790 Zfp90Q61967 636 aa16.58■□□□□ 0.25
Ret-202ENSMUST00000088790 Ckap2lQ7TS74 745 aa16.58■□□□□ 0.25
Ret-202ENSMUST00000088790 AopepQ8BXQ6 817 aa16.58■□□□□ 0.25
Ret-202ENSMUST00000088790 NcaphQ8C156 731 aa16.58■□□□□ 0.25
Ret-202ENSMUST00000088790 Prr33Q8C494 260 aa16.58■□□□□ 0.25
Ret-202ENSMUST00000088790 Fgd4Q91ZT5 766 aa16.58■□□□□ 0.25
Ret-202ENSMUST00000088790 AspgA0JNU3 564 aa16.58■□□□□ 0.24
Ret-202ENSMUST00000088790 IapP03975 557 aa16.58■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms