RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Stk33Q924X7 491 aa15.38■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Osbpl10S4R1M9 766 aa15.38■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Arhgef28P97433 1693 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Gm7942L7N277 499 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Men1O88559 611 aaKnown RBP15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Cap1P40124 474 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Afg1lQ3V384 480 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Trpc1Q61056 793 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Ddr2Q62371 854 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Rccd1Q8BTU7 377 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 BicralQ8CHH5 1074 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Trappc12Q8K2L8 797 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Mtmr6Q8VE11 617 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Mpp3O88910 568 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Fgfr4Q03142 799 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Rnpc3Q3UZ01 514 aaKnown RBP15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Zmym6Q8BS54 1249 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Vta1Q9CR26 309 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Cep72Q9D3R3 646 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Smok2bQ9QYZ3 484 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Smok2aQ9QYZ6 504 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 B3galt4Q9Z0F0 371 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Bmp15Q9Z0L4 392 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Gm3173A6NAS3 172 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Gm3020E9Q3J7 150 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Gm379J3QQ19 296 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Gm2897K7N6T7 172 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Gm8926L7MUE8 181 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Psma3O70435 255 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 S100a9P31725 113 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Fmr1P35922 614 aaKnown RBP15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 S100gP97816 79 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Dna2Q6ZQJ5 1062 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Kcnv1Q8BZN2 503 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Gm3411Q8C7R2 150 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 TwnkQ8CIW5 685 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Syf2Q9D198 242 aaKnown RBP15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 GOLGA7BQ9D428 167 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Pik3cgQ9JHG7 1102 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 GemP55041 295 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 rp9P97762 213 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Pdp2Q504M2 532 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Tdpoz3Q717B4 365 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 ItchQ8C863 864 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Kcnd2Q9Z0V2 630 aa15.37■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Cdca2Q14B71 982 aaKnown RBP15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Samd11Q1RNF8 542 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 ItgadQ3V0T4 1168 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Dmc1Q61880 340 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Ddx3xQ62167 662 aaKnown RBP15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Ssxb10Q6XAR7 170 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Ap1s3Q7TN05 154 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Celf4Q7TSY6 486 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Wnk4Q80UE6 1222 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Wrap53Q8VC51 532 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Oas1dQ8VI95 361 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Sun1Q9D666 913 aaKnown RBP15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Phf2Q9WTU0 1096 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 MaddQ80U28 1577 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Atp8b4A2ANX3 1194 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Sec22bO08547 215 aaKnown RBP15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Mief2Q5NCS9 454 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Glis3Q6XP49 780 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 HlfQ8BW74 295 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Ttc16Q8C1F5 767 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 OgtQ8CGY8 1046 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Abcf3Q8K268 709 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Pglyrp2Q8VCS0 530 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Tex12Q9CR81 123 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Pkp3Q9QY23 797 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Csn1s1P19228 313 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 HdcP23738 662 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 NfiaQ02780 532 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Zc3hav1Q3UPF5 946 aaKnown RBP15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Olfm4Q3UZZ4 505 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Trub2Q91WG3 331 aaKnown RBP15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Atpaf2Q91YY4 289 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Atp5oQ9DB20 213 aaKnown RBP15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Rhox3cA2AWM0 215 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Gm5689F6Y2A6 97 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Rhox3hL7MU37 215 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Ass1P16460 412 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 LtbrP50284 415 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Cct7P80313 544 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Rhox3aQ4TU90 215 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Nup85Q8R480 656 aaKnown RBP15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Tdrd1Q99MV1 1172 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Josd2Q9CR30 188 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 OoepQ9CWE6 164 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Iqsec2Q5DU25 1478 aa15.36■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Ccna2P51943 422 aaKnown RBP15.35■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Cyp2j11Q3UNV2 504 aa15.35■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Lsm8Q6ZWM4 96 aaKnown RBP15.35■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Enoph1Q8BGB7 257 aa15.35■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Cox18Q8VC74 331 aa15.35■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Habp4Q9JKS5 411 aaKnown RBP15.35■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Mms22lB1AUR6 1238 aa15.35■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Celf5D3Z4T1 395 aaKnown RBP15.35■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 Irf5P56477 497 aa15.35■□□□□ 0.05
Pcdh20-201ENSMUST00000061628 D630036H23RikQ3UQD6 204 aa15.35■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 50 ms