RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Rcn1Q05186 325 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Cdca2Q14B71 982 aaKnown RBP10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Rrp36Q3UFY0 244 aaKnown RBP10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Lrfn2Q80TG9 788 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Suds3Q8BR65 328 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Il31raQ8K5B1 716 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Fubp1Q91WJ8 651 aaKnown RBP10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 PalmdQ9JHU2 551 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Atp8b4A2ANX3 1194 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Magea4F2Z493 315 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 PdgfraP26618 1089 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 PtpreP49446 699 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Znf746Q3U133 652 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Rab3ipQ68EF0 428 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Tor1aip2Q8BYU6 502 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Btbd6Q8K2J9 488 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Vmn1r218Q8R261 298 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Ndufa10Q99LC3 355 aaKnown RBP10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 PlekQ9JHK5 350 aaKnown RBP10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 ThegQ9JMB1 375 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 C1qtnf1Q9QXP7 281 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Usp21Q9QZL6 566 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Nav1Q8CH77 1875 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Nlrp1bA1Z198 1177 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Maml3D4QGC2 1135 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 PklrP53657 574 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Siah1aP61092 282 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Muc1Q02496 630 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Gprin1Q3UNH4 932 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Tbc1d22aQ8R5A6 516 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Zfp566Q8VCI1 386 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Pip4k2cQ91XU3 421 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Usp26Q99MX1 835 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 EtfbQ9DCW4 255 aaKnown RBP10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Rtl9Q32KG4 1339 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Dync1i2O88487 612 aaKnown RBP10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Msh3P13705 1091 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Hoxd10P28359 340 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Tlx1P43345 332 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Casp4P70343 373 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Serping1P97290 504 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 ZufspQ3T9Z9 577 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Wdr36Q3TAQ9 899 aaKnown RBP10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Ice2Q3UZ18 988 aaKnown RBP10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Slc26a2Q62273 739 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Mtmr10Q7TPM9 771 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Svs3bQ8BZH8 265 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Ppp4r4Q8C0Y0 875 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Rasal3Q8C2K5 1041 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Q8R1Y2 203 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Ascc1Q9D8Z1 356 aaKnown RBP10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 4930469K13RikA0A286YDB2 92 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Ctnnal1O88327 731 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Gbp10Q000W5 611 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Zfyve28Q6ZPK7 905 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 SybuQ8BHS8 665 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Senp7Q8BUH8 1037 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Ildr1Q8CBR1 537 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 BfarQ8R079 450 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Def8Q99J78 448 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Wars2Q9CYK1 360 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Ten1Q9D7K2 161 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Grk1Q9WVL4 564 aa10.76□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Mtco1P00397 514 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 CblP22682 913 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Vcam1P29533 739 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Ccr1P51675 355 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Olfm3P63056 478 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Sdr16c6Q05A13 316 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Rcsd1Q3UZA1 412 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Tgoln2Q62314 363 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Plk4Q64702 925 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 LnpkQ7TQ95 425 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 AopepQ8BXQ6 817 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 NcaphQ8C156 731 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 ChiaQ91XA9 473 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Uap1Q91YN5 522 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Slxl1Q9D515 155 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Lrrc46Q9DAP0 323 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Trpc5Q9QX29 975 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Pitpnm2Q6ZPQ6 1335 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Rabgap1lA6H6A9 815 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Pdk4O70571 412 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Wee1P47810 646 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Galnt5Q8C102 930 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Uba3Q8C878 462 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Stau2Q8CJ67 570 aaKnown RBP10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Cog4Q8R1U1 785 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Ero1bQ8R2E9 467 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 CpzQ8R4V4 654 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Nsmce3Q9CPR8 279 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Chordc1Q9D1P4 331 aaKnown RBP10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Stk11Q9WTK7 436 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Atp6v0a1Q9Z1G4 839 aaKnown RBP10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 NalcnQ8BXR5 1738 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Itga9B8JK39 1036 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Pcdh9F8VPK8 1237 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Akr1b10G5E895 316 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Shoc2O88520 582 aaKnown RBP10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Ly9Q01965 654 aa10.75□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms