RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Ctnnd1P30999 938 aaKnown RBP12.14□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Abi2P62484 446 aa12.14□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 MylpfP97457 169 aa12.14□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Adamts1P97857 968 aa12.14□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Sh3bp2Q06649 559 aa12.14□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Krt80Q0VBK2 452 aa12.14□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Upf3bQ3ULL6 472 aa12.14□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Nlrc4Q3UP24 1024 aa12.14□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Dsg1aQ61495 1057 aa12.14□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Zcchc2Q69ZB8 1166 aa12.14□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 MyorgQ69ZQ1 716 aa12.14□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Tatdn1Q6P8M1 295 aa12.14□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Vat1lQ80TB8 417 aa12.14□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Gpr61Q8C010 449 aa12.14□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Brat1Q8C3R1 822 aa12.14□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Lin9Q8C735 542 aa12.14□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Wrnip1Q91XU0 660 aa12.14□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Ube2sQ921J4 223 aa12.14□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Mfap3Q922T2 349 aa12.14□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Col25a1Q99MQ5 666 aa12.14□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Atoh8Q99NA2 322 aa12.14□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Glipr1l2Q9CQ35 332 aa12.14□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Tomm70Q9CZW5 611 aa12.14□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Mms19Q9D071 1031 aa12.14□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Fthl17aQ9DAX0 182 aa12.14□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Rnf25Q9QZR0 456 aa12.14□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Ttc13A0A1L1SSC7 844 aa12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Arhgef37A1IGU4 676 aa12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Dpy19l4A2AJQ3 722 aa12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Nfxl1E9Q8I7 918 aaKnown RBP12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Mmp15O54732 657 aa12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Stk10O55098 966 aa12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 P01650 108 aa12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 P01653 108 aa12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Adssl1P28650 457 aa12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Kif4P33174 1231 aa12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Upp1P52624 311 aa12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Rin3P59729 980 aa12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Prss55Q14BX2 321 aa12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Aarsd1Q3THG9 412 aa12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Pik3r6Q3U6Q4 756 aa12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Fnip1Q68FD7 1165 aa12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Tmem151bQ68FE7 561 aa12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Dhx40Q6PE54 779 aaKnown RBP12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Znf12Q7TSI0 686 aa12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Rspry1Q8BVR6 576 aa12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Fndc3aQ8BX90 1198 aa12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Tmx3Q8BXZ1 456 aa12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Syt15Q8C6N3 418 aa12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 AagabQ8R2R3 316 aa12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Nmrk1Q91W63 195 aa12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Tmem132aQ922P8 1018 aa12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Ackr4Q924I3 350 aa12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Fam187aQ9D3R5 417 aa12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Slc39a5Q9D856 535 aa12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Scyl3Q9DBQ7 735 aa12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 NumbQ9QZS3 653 aa12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Bscl2Q9Z2E9 383 aa12.13□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Sh2d4bA6X942 431 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Unc13dB2RUP2 1085 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Vmn2r115E9Q0E7 857 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Top6blJ3QMY9 579 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Smim22J3QP37 91 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Hes2O54792 157 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 P01652 108 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Lrrc47Q505F5 581 aaKnown RBP12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Ksr1Q61097 873 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 PostnQ62009 838 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Six2Q62232 296 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Krt39Q6IFX4 482 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Ttyh3Q6P5F7 524 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Otop2Q80SX5 563 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Pcsk9Q80W65 694 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 FsbpQ8BKE5 299 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Nipal1Q8BMW7 416 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Kctd6Q8BNL5 237 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Iqcb1Q8BP00 598 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Robo4Q8C310 1012 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 RtknQ8C6B2 564 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Lancl3Q8CD19 420 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Zdhhc3Q8R173 299 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Igsf8Q8R366 611 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Q9D1F3 157 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Serpina9Q9D7D2 418 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Rnf6Q9DBU5 667 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Pak1ip1Q9DCE5 382 aaKnown RBP12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Erap1Q9EQH2 930 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Itga2bQ9QUM0 1033 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Znf354bQ9QXT9 601 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Tnni1Q9WUZ5 187 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Sept5Q9Z2Q6 369 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Gbf1Q6DFZ1 1861 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Rp1P56716 2095 aa12.12□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Atg2aQ6P4T0 1914 aa12.11□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Gm1661E9Q963 441 aa12.11□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Hmx1O70218 332 aa12.11□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Abcb1bP06795 1276 aa12.11□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 SrgnP13609 152 aa12.11□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Ybx1P62960 322 aaKnown RBP12.11□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Hmgb1P63158 215 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms