RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C PET9P18239 318 aaKnown RBP1.85□□□□□ -2.11
RPC40YPR110C MAG1P22134 296 aaKnown RBP1.85□□□□□ -2.11
RPC40YPR110C PTM1P32857 523 aa1.85□□□□□ -2.11
RPC40YPR110C MRPL17P36528 281 aa1.85□□□□□ -2.11
RPC40YPR110C UMP1P38293 148 aa1.85□□□□□ -2.11
RPC40YPR110C YHR022CP38763 256 aa1.85□□□□□ -2.11
RPC40YPR110C AYR1P40471 297 aa1.85□□□□□ -2.11
RPC40YPR110C EFM5P53200 248 aaKnown RBP1.85□□□□□ -2.11
RPC40YPR110C RPL22BP56628 122 aaKnown RBP1.85□□□□□ -2.11
RPC40YPR110C YPL162CQ12042 273 aa1.85□□□□□ -2.11
RPC40YPR110C MDM32Q12171 622 aa1.85□□□□□ -2.11
RPC40YPR110C TSC3Q3E790 80 aa1.85□□□□□ -2.11
RPC40YPR110C TIM9O74700 87 aa1.84□□□□□ -2.11
RPC40YPR110C RPL35AP0CX84 120 aaKnown RBP1.84□□□□□ -2.11
RPC40YPR110C RPL35BP0CX85 120 aaKnown RBP1.84□□□□□ -2.11
RPC40YPR110C RPB3P16370 318 aaKnown RBP1.84□□□□□ -2.11
RPC40YPR110C MRPS28P21771 286 aa1.84□□□□□ -2.11
RPC40YPR110C MGT1P26188 188 aa1.84□□□□□ -2.11
RPC40YPR110C ATP7P30902 174 aa1.84□□□□□ -2.11
RPC40YPR110C EGD2P38879 174 aaKnown RBP1.84□□□□□ -2.11
RPC40YPR110C AIM18P38884 321 aa1.84□□□□□ -2.11
RPC40YPR110C TIR3P40552 269 aa1.84□□□□□ -2.11
RPC40YPR110C CYT2Q00873 224 aa1.84□□□□□ -2.11
RPC40YPR110C EFG1Q3E705 233 aaKnown RBP1.84□□□□□ -2.11
RPC40YPR110C YKL068W-AQ3E826 78 aa1.84□□□□□ -2.11
RPC40YPR110C YHR214C-EQ8TGK0 99 aa1.84□□□□□ -2.11
RPC40YPR110C CMD1P06787 147 aaKnown RBP1.83□□□□□ -2.12
RPC40YPR110C URA5P13298 226 aaKnown RBP1.83□□□□□ -2.12
RPC40YPR110C BET1P22804 142 aa1.83□□□□□ -2.12
RPC40YPR110C PEX34P25584 144 aa1.83□□□□□ -2.12
RPC40YPR110C SEC72P39742 193 aaKnown RBP1.83□□□□□ -2.12
RPC40YPR110C AST2P39945 430 aaKnown RBP1.83□□□□□ -2.12
RPC40YPR110C YEL028WP39989 153 aa1.83□□□□□ -2.12
RPC40YPR110C EDC3P39998 551 aaKnown RBP1.83□□□□□ -2.12
RPC40YPR110C SMX2P40204 77 aaKnown RBP1.83□□□□□ -2.12
RPC40YPR110C GVP36P40531 326 aaKnown RBP1.83□□□□□ -2.12
RPC40YPR110C MMS2P53152 137 aa1.83□□□□□ -2.12
RPC40YPR110C GRX8Q05926 109 aa1.83□□□□□ -2.12
RPC40YPR110C YHR086W-AQ3E746 53 aa1.83□□□□□ -2.12
RPC40YPR110C YFR032C-BQ8TGU2 87 aa1.83□□□□□ -2.12
RPC40YPR110C UBR1P19812 1950 aa1.82□□□□□ -2.12
RPC40YPR110C CNB1P25296 175 aa1.82□□□□□ -2.12
RPC40YPR110C SNC2P33328 115 aa1.82□□□□□ -2.12
RPC40YPR110C DSE2P38844 325 aa1.82□□□□□ -2.12
RPC40YPR110C MOB1P40484 314 aa1.82□□□□□ -2.12
RPC40YPR110C BOL2P53082 120 aa1.82□□□□□ -2.12
RPC40YPR110C TIM13P53299 105 aa1.82□□□□□ -2.12
RPC40YPR110C YIP3P53633 176 aa1.82□□□□□ -2.12
RPC40YPR110C FSF1Q12029 327 aaKnown RBP1.82□□□□□ -2.12
RPC40YPR110C OCA6Q12454 224 aa1.82□□□□□ -2.12
RPC40YPR110C TOM1Q03280 3268 aa1.81□□□□□ -2.12
RPC40YPR110C MRS1P07266 363 aa1.81□□□□□ -2.12
RPC40YPR110C GPA2P10823 449 aa1.81□□□□□ -2.12
RPC40YPR110C ATP15P21306 62 aa1.81□□□□□ -2.12
RPC40YPR110C MDH2P22133 377 aa1.81□□□□□ -2.12
RPC40YPR110C SHE2P36068 246 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12not detected
RPC40YPR110C ETR1P38071 380 aa1.81□□□□□ -2.12
RPC40YPR110C YNL217WP40152 326 aa1.81□□□□□ -2.12
RPC40YPR110C PEP8P40335 379 aa1.81□□□□□ -2.12
RPC40YPR110C AGE2P40529 298 aa1.81□□□□□ -2.12
RPC40YPR110C AIM25P47140 327 aa1.81□□□□□ -2.12
RPC40YPR110C SWC7Q06707 132 aa1.81□□□□□ -2.12
RPC40YPR110C LDB18Q07887 179 aa1.81□□□□□ -2.12
RPC40YPR110C YOL160WQ08321 113 aa1.81□□□□□ -2.12
RPC40YPR110C YDR034W-BQ6Q5X2 51 aa1.81□□□□□ -2.12
RPC40YPR110C TAO3P40468 2376 aa1.81□□□□□ -2.12
RPC40YPR110C SEC14P24280 304 aaKnown RBP1.8□□□□□ -2.12
RPC40YPR110C MAK5P38112 773 aaPredicted RBP1.8□□□□□ -2.12
RPC40YPR110C YBR032WP38223 100 aa1.8□□□□□ -2.12
RPC40YPR110C YER121WP40076 114 aa1.8□□□□□ -2.12
RPC40YPR110C POG1P40473 351 aa1.8□□□□□ -2.12
RPC40YPR110C PIR1Q03178 341 aa1.8□□□□□ -2.12
RPC40YPR110C YET3Q07451 203 aa1.8□□□□□ -2.12
RPC40YPR110C YLR053CQ12026 108 aa1.8□□□□□ -2.12
RPC40YPR110C YLR046CQ12253 270 aa1.8□□□□□ -2.12
RPC40YPR110C PEX11Q12462 236 aa1.8□□□□□ -2.12
RPC40YPR110C SIR2P06700 562 aa1.79□□□□□ -2.12
RPC40YPR110C GCY1P14065 312 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
RPC40YPR110C NSP1P14907 823 aaKnown RBP1.79□□□□□ -2.12
RPC40YPR110C CKS1P20486 150 aaKnown RBP1.79□□□□□ -2.12
RPC40YPR110C ACP1P32463 125 aa1.79□□□□□ -2.12
RPC40YPR110C YBR285WP38354 144 aa1.79□□□□□ -2.12
RPC40YPR110C RCF2P53721 224 aa1.79□□□□□ -2.12
RPC40YPR110C BUD25P85052 153 aa1.79□□□□□ -2.12
RPC40YPR110C SNO1Q03144 224 aa1.79□□□□□ -2.12
RPC40YPR110C HNT1Q04344 158 aaKnown RBP1.79□□□□□ -2.12
RPC40YPR110C YPR114WQ06107 315 aa1.79□□□□□ -2.12
RPC40YPR110C YMR030W-AQ3E760 96 aa1.79□□□□□ -2.12
RPC40YPR110C STT4P37297 1900 aa1.78□□□□□ -2.12
RPC40YPR110C NMT1P14743 455 aa1.78□□□□□ -2.12
RPC40YPR110C YCR099CP25657 155 aa1.78□□□□□ -2.12
RPC40YPR110C FZF1P32805 299 aa1.78□□□□□ -2.12
RPC40YPR110C VPS51P36116 164 aa1.78□□□□□ -2.12
RPC40YPR110C SRP14P38985 146 aa1.78□□□□□ -2.12
RPC40YPR110C GLE2P40066 365 aa1.78□□□□□ -2.12
RPC40YPR110C EMC4P53073 190 aa1.78□□□□□ -2.12
RPC40YPR110C YNR077CP53758 84 aa1.78□□□□□ -2.12
RPC40YPR110C CSN9Q03981 162 aa1.78□□□□□ -2.12
RPC40YPR110C HPT1Q04178 221 aaKnown RBP1.78□□□□□ -2.12
RPC40YPR110C ATG40Q99325 256 aa1.78□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 40.4 ms