RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W MIC12P38341 106 aa1.91□□□□□ -2.1
SEC16YPL085W YHL037CP38733 133 aa1.91□□□□□ -2.1
SEC16YPL085W RPF1P38805 295 aaKnown RBP1.91□□□□□ -2.1
SEC16YPL085W MSO1P53604 210 aaKnown RBP1.91□□□□□ -2.1
SEC16YPL085W API2Q04413 109 aa1.91□□□□□ -2.1
SEC16YPL085W STP3Q05937 343 aa1.91□□□□□ -2.1
SEC16YPL085W SEI1Q06058 285 aa1.91□□□□□ -2.1
SEC16YPL085W YLR126CQ12288 251 aa1.91□□□□□ -2.1
SEC16YPL085W SEC4P07560 215 aaKnown RBP1.9□□□□□ -2.1
SEC16YPL085W FRS1P15624 595 aaKnown RBP1.9□□□□□ -2.1
SEC16YPL085W YIL165CP40446 119 aa1.9□□□□□ -2.1
SEC16YPL085W YIL012WP40551 113 aa1.9□□□□□ -2.1
SEC16YPL085W EGT2P42835 1041 aa1.9□□□□□ -2.1
SEC16YPL085W SPC1P46965 94 aa1.9□□□□□ -2.1
SEC16YPL085W ASI2P53895 289 aa1.9□□□□□ -2.1
SEC16YPL085W AVO2Q04749 426 aa1.9□□□□□ -2.1
SEC16YPL085W YOR376WQ08900 122 aa1.9□□□□□ -2.1
SEC16YPL085W MRS1P07266 363 aa1.9□□□□□ -2.1
SEC16YPL085W CDC50P25656 391 aa1.9□□□□□ -2.1
SEC16YPL085W PAM17P36147 197 aa1.9□□□□□ -2.1
SEC16YPL085W YBR220CP38318 560 aa1.9□□□□□ -2.1
SEC16YPL085W TEM1P38987 245 aa1.9□□□□□ -2.1
SEC16YPL085W HSK3P69852 69 aa1.9□□□□□ -2.1
SEC16YPL085W YKL018C-AQ3E7A7 99 aa1.9□□□□□ -2.1
SEC16YPL085W YCL002CP25565 263 aa1.9□□□□□ -2.11
SEC16YPL085W ARO2P28777 376 aaKnown RBP1.9□□□□□ -2.11
SEC16YPL085W YSC84P32793 468 aa1.9□□□□□ -2.11
SEC16YPL085W NSA2P40078 261 aaKnown RBP1.9□□□□□ -2.11
SEC16YPL085W YIL169CP40442 995 aa1.9□□□□□ -2.11
SEC16YPL085W HAC1P41546 238 aa1.9□□□□□ -2.11
SEC16YPL085W MAK3Q03503 176 aa1.9□□□□□ -2.11
SEC16YPL085W YMR166CQ03829 368 aa1.9□□□□□ -2.11
SEC16YPL085W CUE4Q04201 117 aaPredicted RBP1.9□□□□□ -2.11
SEC16YPL085W NMA1Q06178 401 aaKnown RBP1.9□□□□□ -2.11
SEC16YPL085W YOR343CQ12484 108 aa1.9□□□□□ -2.11
SEC16YPL085W YFL068WP0CX99 160 aa1.9□□□□□ -2.11
SEC16YPL085W YLL066W-AP0CY00 160 aa1.9□□□□□ -2.11
SEC16YPL085W YLL067W-AP0CY01 160 aa1.9□□□□□ -2.11
SEC16YPL085W MRS4P23500 304 aa1.9□□□□□ -2.11
SEC16YPL085W RNA15P25299 296 aaPredicted RBP1.9□□□□□ -2.11
SEC16YPL085W AIM26P32858 118 aa1.9□□□□□ -2.11
SEC16YPL085W ZRT3P34240 503 aa1.9□□□□□ -2.11
SEC16YPL085W POP7P38291 140 aa1.9□□□□□ -2.11
SEC16YPL085W YHR173CP38864 112 aa1.9□□□□□ -2.11
SEC16YPL085W RPS26BP39939 119 aaKnown RBP1.9□□□□□ -2.11
SEC16YPL085W ERG28P40030 148 aa1.9□□□□□ -2.11
SEC16YPL085W SHO1P40073 367 aa1.9□□□□□ -2.11
SEC16YPL085W PEX17P40155 199 aa1.9□□□□□ -2.11
SEC16YPL085W YDR366CP87287 132 aa1.9□□□□□ -2.11
SEC16YPL085W MED7Q08278 222 aa1.9□□□□□ -2.11
SEC16YPL085W YRF1-3P0CX14 1859 aa1.9□□□□□ -2.11
SEC16YPL085W YRF1-7P0CX15 1859 aa1.9□□□□□ -2.11
SEC16YPL085W YRF1-6P53819 1859 aa1.9□□□□□ -2.11
SEC16YPL085W AIM2P39721 246 aa1.9□□□□□ -2.11
SEC16YPL085W LSM4P40070 187 aaKnown RBP1.9□□□□□ -2.11
SEC16YPL085W YGL117WP53133 265 aa1.9□□□□□ -2.11
SEC16YPL085W YMR082CQ04276 118 aa1.9□□□□□ -2.11
SEC16YPL085W ARC18Q05933 178 aaKnown RBP1.9□□□□□ -2.11
SEC16YPL085W ARR3Q06598 404 aa1.9□□□□□ -2.11
SEC16YPL085W COA3Q3E7B2 85 aa1.9□□□□□ -2.11
SEC16YPL085W YNL217WP40152 326 aa1.89□□□□□ -2.11
SEC16YPL085W YFR035CP43608 114 aa1.89□□□□□ -2.11
SEC16YPL085W TAX4P47030 604 aa1.89□□□□□ -2.11
SEC16YPL085W YRA1Q12159 226 aaKnown RBP1.89□□□□□ -2.11
SEC16YPL085W TIM9O74700 87 aa1.89□□□□□ -2.11
SEC16YPL085W YBR144CP34215 104 aa1.89□□□□□ -2.11
SEC16YPL085W YKR032WP36127 104 aa1.89□□□□□ -2.11
SEC16YPL085W YBL071CP38185 102 aa1.89□□□□□ -2.11
SEC16YPL085W YGP1P38616 354 aaKnown RBP1.89□□□□□ -2.11
SEC16YPL085W ANS1P38832 159 aa1.89□□□□□ -2.11
SEC16YPL085W INN1P53901 409 aa1.89□□□□□ -2.11
SEC16YPL085W COX19Q3E731 98 aa1.89□□□□□ -2.11
SEC16YPL085W SEC11P15367 167 aa1.89□□□□□ -2.11
SEC16YPL085W TES1P41903 349 aaKnown RBP1.89□□□□□ -2.11
SEC16YPL085W PAU4P53427 120 aa1.89□□□□□ -2.11
SEC16YPL085W HST4P53688 370 aa1.89□□□□□ -2.11
SEC16YPL085W YOR097CQ12274 175 aaPredicted RBP1.89□□□□□ -2.11
SEC16YPL085W YPR071WQ12346 211 aa1.89□□□□□ -2.11
SEC16YPL085W RPL2AP0CX45 254 aaKnown RBP1.89□□□□□ -2.11
SEC16YPL085W RPL2BP0CX46 254 aaKnown RBP1.89□□□□□ -2.11
SEC16YPL085W RNQ1P25367 405 aa1.89□□□□□ -2.11
SEC16YPL085W TIR2P33890 251 aa1.89□□□□□ -2.11
SEC16YPL085W YKE4P40544 346 aa1.89□□□□□ -2.11
SEC16YPL085W RPL10P41805 221 aaKnown RBP1.89□□□□□ -2.11
SEC16YPL085W SCS3P53012 380 aa1.89□□□□□ -2.11
SEC16YPL085W THI72Q08579 599 aa1.89□□□□□ -2.11
SEC16YPL085W YGR240C-AQ3E786 66 aa1.89□□□□□ -2.11
SEC16YPL085W YDL085C-AQ3E7B7 68 aaKnown RBP1.89□□□□□ -2.11
SEC16YPL085W CDC43P18898 376 aa1.89□□□□□ -2.11
SEC16YPL085W PCL2P25693 308 aa1.89□□□□□ -2.11
SEC16YPL085W RPS27AP35997 82 aaKnown RBP1.89□□□□□ -2.11
SEC16YPL085W MCH2P36032 473 aa1.89□□□□□ -2.11
SEC16YPL085W CBP4P37267 147 aa1.89□□□□□ -2.11
SEC16YPL085W QDR3P38227 689 aa1.89□□□□□ -2.11
SEC16YPL085W RPS27BP38711 82 aa1.89□□□□□ -2.11
SEC16YPL085W BRR6P53062 197 aa1.89□□□□□ -2.11
SEC16YPL085W DOC1P53068 250 aa1.89□□□□□ -2.11
SEC16YPL085W ERV14P53173 138 aa1.89□□□□□ -2.11
SEC16YPL085W UBC7Q02159 165 aa1.89□□□□□ -2.11
SEC16YPL085W YDR415CQ04033 374 aaPredicted RBP1.89□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 48.9 ms