RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C COX10P21592 462 aa2.6□□□□□ -1.99
LCB4YOR171C YCR025CP25352 136 aa2.6□□□□□ -1.99
LCB4YOR171C GLC7P32598 312 aaKnown RBP2.6□□□□□ -1.99
LCB4YOR171C AST2P39945 430 aaKnown RBP2.6□□□□□ -1.99
LCB4YOR171C SPC25P40014 221 aa2.6□□□□□ -1.99
LCB4YOR171C EDC2P40023 145 aaPredicted RBP2.6□□□□□ -1.99
LCB4YOR171C TDA4P47153 279 aa2.6□□□□□ -1.99
LCB4YOR171C YGL193CP53097 103 aa2.6□□□□□ -1.99
LCB4YOR171C RAD28Q12021 506 aa2.6□□□□□ -1.99
LCB4YOR171C YBL008W-AQ3E821 79 aa2.6□□□□□ -1.99
LCB4YOR171C GEA2P39993 1459 aaKnown RBP2.59□□□□□ -1.99
LCB4YOR171C RPS8AP0CX39 200 aaKnown RBP2.59□□□□□ -1.99
LCB4YOR171C RPS8BP0CX40 200 aaKnown RBP2.59□□□□□ -1.99
LCB4YOR171C TOM40P23644 387 aaKnown RBP2.59□□□□□ -1.99
LCB4YOR171C YER188WP40103 239 aa2.59□□□□□ -1.99
LCB4YOR171C OSH6Q02201 448 aa2.59□□□□□ -1.99
LCB4YOR171C YMR181CQ03231 154 aa2.59□□□□□ -1.99
LCB4YOR171C YMR103CQ04436 120 aa2.59□□□□□ -1.99
LCB4YOR171C FCF1Q05498 189 aaPredicted RBP2.59□□□□□ -1.99
LCB4YOR171C YDL211CQ12121 372 aa2.59□□□□□ -1.99
LCB4YOR171C YMR230W-AQ3E7B5 62 aa2.59□□□□□ -1.99
LCB4YOR171C ADE6P38972 1358 aaKnown RBP2.59□□□□□ -2
LCB4YOR171C YEL009C-AA0A023PZF2 135 aa2.58□□□□□ -2
LCB4YOR171C RPS18AP0CX55 146 aaKnown RBP2.58□□□□□ -2
LCB4YOR171C RPS18BP0CX56 146 aaPredicted RBP2.58□□□□□ -2
LCB4YOR171C ATR1P13090 542 aa2.58□□□□□ -2
LCB4YOR171C URA10P30402 227 aa2.58□□□□□ -2
LCB4YOR171C SRB6P32570 121 aa2.58□□□□□ -2
LCB4YOR171C CSE2P33308 149 aa2.58□□□□□ -2
LCB4YOR171C SMP1P38128 452 aa2.58□□□□□ -2
LCB4YOR171C TEM1P38987 245 aa2.58□□□□□ -2
LCB4YOR171C IRC22P40006 225 aa2.58□□□□□ -2
LCB4YOR171C GAT4P40569 121 aa2.58□□□□□ -2
LCB4YOR171C SKI6P46948 246 aaPredicted RBP2.58□□□□□ -2
LCB4YOR171C BAT2P47176 376 aaKnown RBP2.58□□□□□ -2
LCB4YOR171C SWT21P53873 357 aaPredicted RBP2.58□□□□□ -2
LCB4YOR171C YHC1Q05900 231 aaKnown RBP2.58□□□□□ -2
LCB4YOR171C SNX3Q08826 162 aaKnown RBP2.58□□□□□ -2
LCB4YOR171C YPL278CQ08990 100 aa2.58□□□□□ -2
LCB4YOR171C YPL162CQ12042 273 aa2.58□□□□□ -2
LCB4YOR171C YOR097CQ12274 175 aaPredicted RBP2.58□□□□□ -2
LCB4YOR171C HAP3P13434 144 aa2.58□□□□□ -2
LCB4YOR171C MRS4P23500 304 aa2.58□□□□□ -2
LCB4YOR171C AHT1P29589 182 aa2.58□□□□□ -2
LCB4YOR171C COX14P39103 70 aa2.58□□□□□ -2
LCB4YOR171C AVT6P40074 448 aa2.58□□□□□ -2
LCB4YOR171C MPM1P40364 252 aa2.58□□□□□ -2
LCB4YOR171C YIL059CP40520 121 aa2.58□□□□□ -2
LCB4YOR171C PHS1P40857 217 aa2.58□□□□□ -2
LCB4YOR171C GEP7P53171 287 aa2.58□□□□□ -2
LCB4YOR171C ADD37Q03233 198 aa2.58□□□□□ -2
LCB4YOR171C LPP1Q04396 274 aa2.58□□□□□ -2
LCB4YOR171C SHH3Q04487 196 aa2.58□□□□□ -2
LCB4YOR171C KEI1Q06346 221 aa2.58□□□□□ -2
LCB4YOR171C SWC7Q06707 132 aa2.58□□□□□ -2
LCB4YOR171C SLD7Q08457 257 aa2.58□□□□□ -2
LCB4YOR171C YPR011CQ12251 326 aa2.58□□□□□ -2
LCB4YOR171C YBR298C-AQ8TGK4 73 aa2.58□□□□□ -2
LCB4YOR171C MYO2P19524 1574 aaKnown RBP2.58□□□□□ -2
LCB4YOR171C TCB3Q03640 1545 aaKnown RBP2.58□□□□□ -2
LCB4YOR171C UTP30P36144 274 aaKnown RBP2.57□□□□□ -2
LCB4YOR171C SFT2P38166 215 aa2.57□□□□□ -2
LCB4YOR171C SHE1P38200 338 aa2.57□□□□□ -2
LCB4YOR171C NSG1P38837 291 aa2.57□□□□□ -2
LCB4YOR171C IPT1P38954 527 aa2.57□□□□□ -2
LCB4YOR171C YAR029WP39549 74 aa2.57□□□□□ -2
LCB4YOR171C RPL13BP40212 199 aaKnown RBP2.57□□□□□ -2
LCB4YOR171C CUP9P41817 306 aa2.57□□□□□ -2
LCB4YOR171C PFS2P42841 465 aaKnown RBP2.57□□□□□ -2
LCB4YOR171C PAM16P42949 149 aa2.57□□□□□ -2
LCB4YOR171C TY1B-DR4Q07793 1604 aa2.57□□□□□ -2
LCB4YOR171C RPL9AP05738 191 aaKnown RBP2.56□□□□□ -2
LCB4YOR171C HSP12P22943 109 aaKnown RBP2.56□□□□□ -2
LCB4YOR171C IMP1P28627 190 aa2.56□□□□□ -2
LCB4YOR171C EMP24P32803 203 aaKnown RBP2.56□□□□□ -2
LCB4YOR171C YNL200CP40165 246 aaKnown RBP2.56□□□□□ -2
LCB4YOR171C YIR035CP40579 254 aa2.56□□□□□ -2
LCB4YOR171C RPL9BP51401 191 aaKnown RBP2.56□□□□□ -2
LCB4YOR171C YGL260WP53056 76 aa2.56□□□□□ -2
LCB4YOR171C EMC4P53073 190 aa2.56□□□□□ -2
LCB4YOR171C SDS23P53172 527 aa2.56□□□□□ -2
LCB4YOR171C YGR164WP53291 111 aa2.56□□□□□ -2
LCB4YOR171C EST3Q03096 181 aa2.56□□□□□ -2
LCB4YOR171C RCE1Q03530 315 aa2.56□□□□□ -2
LCB4YOR171C YMR252CQ04814 134 aa2.56□□□□□ -2
LCB4YOR171C YML100W-AQ8TGT0 57 aa2.56□□□□□ -2
LCB4YOR171C RPB5P20434 215 aa2.56□□□□□ -2
LCB4YOR171C LDS1P31379 325 aa2.56□□□□□ -2
LCB4YOR171C KRE9P39005 276 aa2.56□□□□□ -2
LCB4YOR171C CCS1P40202 249 aaKnown RBP2.56□□□□□ -2
LCB4YOR171C YFR045WP43617 309 aa2.56□□□□□ -2
LCB4YOR171C EAF6P47128 113 aa2.56□□□□□ -2
LCB4YOR171C PIR3Q03180 325 aa2.56□□□□□ -2
LCB4YOR171C YOL014WQ08110 124 aa2.56□□□□□ -2
LCB4YOR171C PPT2Q12036 173 aa2.56□□□□□ -2
LCB4YOR171C RPL13AQ12690 199 aaPredicted RBP2.56□□□□□ -2
LCB4YOR171C PDR11P40550 1411 aa2.56□□□□□ -2
LCB4YOR171C RPB3P16370 318 aaKnown RBP2.55□□□□□ -2
LCB4YOR171C STF2P16965 84 aa2.55□□□□□ -2
LCB4YOR171C CLB6P32943 380 aa2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 72.6 ms