RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W WSS1P38838 269 aa8.11□□□□□ -1.11
PRE6YOL038W GET2P40056 285 aa8.11□□□□□ -1.11
PRE6YOL038W YIF1P53845 314 aaKnown RBP8.11□□□□□ -1.11
PRE6YOL038W YMR090WQ04304 227 aaKnown RBP8.11□□□□□ -1.11
PRE6YOL038W RAD28Q12021 506 aa8.11□□□□□ -1.11
PRE6YOL038W USV1Q12132 391 aa8.11□□□□□ -1.11
PRE6YOL038W CYC3P06182 269 aa8.1□□□□□ -1.11
PRE6YOL038W YKL162CP36052 402 aa8.1□□□□□ -1.11
PRE6YOL038W NRG2P38082 220 aa8.1□□□□□ -1.11
PRE6YOL038W HAM1P47119 197 aaKnown RBP8.1□□□□□ -1.11
PRE6YOL038W YJR111CP47148 283 aaKnown RBP8.1□□□□□ -1.11
PRE6YOL038W JAC1P53193 184 aa8.1□□□□□ -1.11
PRE6YOL038W NCE103P53615 221 aa8.1□□□□□ -1.11
PRE6YOL038W HCH1P53834 153 aa8.1□□□□□ -1.11
PRE6YOL038W ERP1Q05359 219 aaKnown RBP8.1□□□□□ -1.11
PRE6YOL038W BER1Q06688 274 aaKnown RBP8.1□□□□□ -1.11
PRE6YOL038W AIM45Q12480 344 aaKnown RBP8.1□□□□□ -1.11
PRE6YOL038W YGL194C-AQ2V2P6 80 aa8.1□□□□□ -1.11
PRE6YOL038W ALK2P32789 676 aaPredicted RBP8.09□□□□□ -1.11
PRE6YOL038W DOG2P38773 246 aa8.09□□□□□ -1.11
PRE6YOL038W DOG1P38774 246 aa8.09□□□□□ -1.11
PRE6YOL038W VMA22P38784 181 aa8.09□□□□□ -1.11
PRE6YOL038W YEA6P39953 335 aa8.09□□□□□ -1.11
PRE6YOL038W NSA2P40078 261 aaKnown RBP8.09□□□□□ -1.11
PRE6YOL038W YGR018CP53211 109 aa8.09□□□□□ -1.11
PRE6YOL038W ATG39Q06159 398 aa8.09□□□□□ -1.11
PRE6YOL038W TDA6Q06466 467 aa8.09□□□□□ -1.11
PRE6YOL038W POC4Q12245 148 aaPredicted RBP8.09□□□□□ -1.11
PRE6YOL038W COA2Q3E823 68 aa8.09□□□□□ -1.11
PRE6YOL038W SEC22P22214 214 aa8.08□□□□□ -1.12
PRE6YOL038W YPI1P43587 155 aa8.08□□□□□ -1.12
PRE6YOL038W TIM44Q01852 431 aa8.08□□□□□ -1.12
PRE6YOL038W FRQ1Q06389 190 aa8.08□□□□□ -1.12
PRE6YOL038W GLE2P40066 365 aa8.07□□□□□ -1.12
PRE6YOL038W SIM1P40472 476 aa8.07□□□□□ -1.12
PRE6YOL038W TAD2P47058 250 aa8.07□□□□□ -1.12
PRE6YOL038W YJL027CP47063 138 aaPredicted RBP8.07□□□□□ -1.12
PRE6YOL038W ANT1Q06497 328 aa8.07□□□□□ -1.12
PRE6YOL038W TIM18Q08749 192 aa8.07□□□□□ -1.12
PRE6YOL038W CDS1P38221 457 aa8.06□□□□□ -1.12
PRE6YOL038W SLM6P38343 150 aa8.06□□□□□ -1.12
PRE6YOL038W MST28P39552 234 aa8.06□□□□□ -1.12
PRE6YOL038W AGX1P43567 385 aa8.06□□□□□ -1.12
PRE6YOL038W SRB7P47822 140 aa8.06□□□□□ -1.12
PRE6YOL038W MST27P53176 234 aa8.06□□□□□ -1.12
PRE6YOL038W GEP3Q08622 556 aa8.06□□□□□ -1.12
PRE6YOL038W YPS3Q12303 508 aa8.06□□□□□ -1.12
PRE6YOL038W AGC1Q12482 902 aa8.06□□□□□ -1.12
PRE6YOL038W YCR022CP25620 114 aa8.05□□□□□ -1.12
PRE6YOL038W YGR025WP53216 100 aa8.05□□□□□ -1.12
PRE6YOL038W PDR17P53844 350 aa8.05□□□□□ -1.12
PRE6YOL038W LRS4Q04087 347 aaKnown RBP8.05□□□□□ -1.12
PRE6YOL038W YPL264CQ08980 353 aa8.05□□□□□ -1.12
PRE6YOL038W PAA1Q12447 191 aaKnown RBP8.05□□□□□ -1.12
PRE6YOL038W YHR213W-AQ8TGT4 77 aa8.05□□□□□ -1.12
PRE6YOL038W YBL071CP38185 102 aa8.04□□□□□ -1.12
PRE6YOL038W RRT1P38192 103 aa8.04□□□□□ -1.12
PRE6YOL038W HXT14P42833 540 aa8.04□□□□□ -1.12
PRE6YOL038W YGL117WP53133 265 aa8.04□□□□□ -1.12
PRE6YOL038W DCS1Q06151 350 aa8.04□□□□□ -1.12
PRE6YOL038W COX2P00410 251 aa8.03□□□□□ -1.12
PRE6YOL038W ASP1P38986 381 aaPredicted RBP8.03□□□□□ -1.12
PRE6YOL038W BDH1P39714 382 aa8.03□□□□□ -1.12
PRE6YOL038W ERV25P54837 211 aaKnown RBP8.03□□□□□ -1.12
PRE6YOL038W TRI1Q05024 226 aa8.03□□□□□ -1.12
PRE6YOL038W POP5P28005 173 aa8.02□□□□□ -1.13
PRE6YOL038W GCV3P39726 170 aaPredicted RBP8.02□□□□□ -1.13
PRE6YOL038W YEA4P40004 342 aa8.02□□□□□ -1.13
PRE6YOL038W YBR298C-AQ8TGK4 73 aa8.02□□□□□ -1.13
PRE6YOL038W FCY2P17064 533 aa8.01□□□□□ -1.13
PRE6YOL038W POR2P40478 281 aa8.01□□□□□ -1.13
PRE6YOL038W TDA4P47153 279 aa8.01□□□□□ -1.13
PRE6YOL038W MIC26P50087 233 aa8.01□□□□□ -1.13
PRE6YOL038W YMR082CQ04276 118 aa8.01□□□□□ -1.13
PRE6YOL038W COA4Q05809 96 aa8.01□□□□□ -1.13
PRE6YOL038W POS5Q06892 414 aa8.01□□□□□ -1.13
PRE6YOL038W RPP1AP05318 106 aaPredicted RBP8□□□□□ -1.13
PRE6YOL038W UBI4P0CG63 381 aaKnown RBP8□□□□□ -1.13
PRE6YOL038W UPS2P35200 230 aa8□□□□□ -1.13
PRE6YOL038W YAP1802P53309 568 aa8□□□□□ -1.13
PRE6YOL038W OCA2P53949 197 aa8□□□□□ -1.13
PRE6YOL038W RDS3Q06835 107 aaPredicted RBP8□□□□□ -1.13
PRE6YOL038W RPS25BP0C0T4 108 aaKnown RBP7.99□□□□□ -1.13
PRE6YOL038W YHR213WP0CI67 198 aa7.99□□□□□ -1.13
PRE6YOL038W YCR025CP25352 136 aa7.99□□□□□ -1.13
PRE6YOL038W CSH1P38287 376 aa7.99□□□□□ -1.13
PRE6YOL038W SNX4P47057 423 aa7.99□□□□□ -1.13
PRE6YOL038W LST7P53237 242 aa7.99□□□□□ -1.13
PRE6YOL038W YLR179CQ06252 201 aaKnown RBP7.99□□□□□ -1.13
PRE6YOL038W RPS25AQ3E792 108 aaPredicted RBP7.99□□□□□ -1.13
PRE6YOL038W AVT5P38176 459 aa7.98□□□□□ -1.13
PRE6YOL038W PEX7P39108 375 aa7.98□□□□□ -1.13
PRE6YOL038W LCB3P47013 409 aa7.98□□□□□ -1.13
PRE6YOL038W YNR066CP53752 436 aa7.98□□□□□ -1.13
PRE6YOL038W POM34Q12445 299 aa7.98□□□□□ -1.13
PRE6YOL038W YMR316C-AI2HB70 103 aa7.97□□□□□ -1.13
PRE6YOL038W PIS1P06197 220 aaKnown RBP7.97□□□□□ -1.13
PRE6YOL038W ALG13P53178 202 aa7.97□□□□□ -1.13
PRE6YOL038W MRPS17Q03246 237 aaPredicted RBP7.97□□□□□ -1.13
PRE6YOL038W YBR085C-AO43137 85 aa7.96□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms