RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W ORM1P53224 222 aa5.63□□□□□ -1.51
HDA1YNL021W PKR1Q03880 122 aaKnown RBP5.63□□□□□ -1.51
HDA1YNL021W YDL211CQ12121 372 aa5.63□□□□□ -1.51
HDA1YNL021W DOG1P38774 246 aa5.62□□□□□ -1.51
HDA1YNL021W IPI1P38803 334 aaPredicted RBP5.62□□□□□ -1.51
HDA1YNL021W GPI14P47088 403 aaKnown RBP5.62□□□□□ -1.51
HDA1YNL021W YOL162WP0CF19 215 aa5.62□□□□□ -1.51
HDA1YNL021W YCR023CP25351 611 aa5.62□□□□□ -1.51
HDA1YNL021W RPS20P38701 121 aaKnown RBP5.62□□□□□ -1.51
HDA1YNL021W YGL101WP53144 215 aa5.62□□□□□ -1.51
HDA1YNL021W HSK3P69852 69 aa5.62□□□□□ -1.51
HDA1YNL021W PLP1Q04004 230 aa5.62□□□□□ -1.51
HDA1YNL021W YOL160WQ08321 113 aa5.62□□□□□ -1.51
HDA1YNL021W UIP4Q08926 304 aa5.62□□□□□ -1.51
HDA1YNL021W IMP1P28627 190 aa5.61□□□□□ -1.51
HDA1YNL021W UGX2P32772 223 aa5.61□□□□□ -1.51
HDA1YNL021W FMP48P53233 369 aa5.61□□□□□ -1.51
HDA1YNL021W ERV29P53337 310 aa5.61□□□□□ -1.51
HDA1YNL021W UBC7Q02159 165 aa5.61□□□□□ -1.51
HDA1YNL021W MAK3Q03503 176 aa5.61□□□□□ -1.51
HDA1YNL021W YMR244WQ04018 355 aa5.61□□□□□ -1.51
HDA1YNL021W YLR281CQ05863 155 aa5.61□□□□□ -1.51
HDA1YNL021W HRI1Q05905 244 aaKnown RBP5.61□□□□□ -1.51
HDA1YNL021W JID1Q12350 301 aa5.61□□□□□ -1.51
HDA1YNL021W SLO1Q3E784 85 aa5.61□□□□□ -1.51
HDA1YNL021W CBP6P07253 162 aaPredicted RBP5.6□□□□□ -1.51
HDA1YNL021W ECM34P38728 170 aa5.6□□□□□ -1.51
HDA1YNL021W NVJ1P38881 321 aa5.6□□□□□ -1.51
HDA1YNL021W STB1P42845 420 aa5.6□□□□□ -1.51
HDA1YNL021W YKR005CQ02203 525 aa5.6□□□□□ -1.51
HDA1YNL021W ELP6Q04868 273 aa5.6□□□□□ -1.51
HDA1YNL021W PAL1Q05518 499 aaKnown RBP5.6□□□□□ -1.51
HDA1YNL021W BGL2P15703 313 aaKnown RBP5.6□□□□□ -1.51
HDA1YNL021W PRE7P23724 241 aaKnown RBP5.6□□□□□ -1.51
HDA1YNL021W OCH1P31755 480 aa5.6□□□□□ -1.51
HDA1YNL021W MRPL15P36523 253 aa5.6□□□□□ -1.51
HDA1YNL021W LSM7P53905 115 aaKnown RBP5.6□□□□□ -1.51
HDA1YNL021W ACT1P60010 375 aaKnown RBP5.6□□□□□ -1.51
HDA1YNL021W SLM6P38343 150 aa5.59□□□□□ -1.51
HDA1YNL021W YIL012WP40551 113 aa5.59□□□□□ -1.51
HDA1YNL021W YPR174CQ06616 221 aaPredicted RBP5.59□□□□□ -1.51
HDA1YNL021W SPC3Q12133 184 aa5.59□□□□□ -1.51
HDA1YNL021W YHR214C-EQ8TGK0 99 aa5.59□□□□□ -1.51
HDA1YNL021W DID2P69771 204 aa5.59□□□□□ -1.52
HDA1YNL021W YDR249CQ03787 373 aa5.59□□□□□ -1.52
HDA1YNL021W RPL21BQ12672 160 aaKnown RBP5.59□□□□□ -1.52
HDA1YNL021W POL2P21951 2222 aaKnown RBP5.58□□□□□ -1.52
HDA1YNL021W UTH1P36135 365 aa5.58□□□□□ -1.52
HDA1YNL021W EDC2P40023 145 aaPredicted RBP5.58□□□□□ -1.52
HDA1YNL021W GLC8P41818 229 aa5.58□□□□□ -1.52
HDA1YNL021W YAE1P47118 141 aaPredicted RBP5.58□□□□□ -1.52
HDA1YNL021W HST4P53688 370 aa5.58□□□□□ -1.52
HDA1YNL021W INP1Q03694 420 aa5.58□□□□□ -1.52
HDA1YNL021W HNT1Q04344 158 aaKnown RBP5.58□□□□□ -1.52
HDA1YNL021W RPL25P04456 142 aaKnown RBP5.57□□□□□ -1.52
HDA1YNL021W RPS27AP35997 82 aaKnown RBP5.57□□□□□ -1.52
HDA1YNL021W RPS27BP38711 82 aa5.57□□□□□ -1.52
HDA1YNL021W LSM4P40070 187 aaKnown RBP5.57□□□□□ -1.52
HDA1YNL021W PGD1P40356 397 aa5.57□□□□□ -1.52
HDA1YNL021W YIL086CP40503 102 aa5.57□□□□□ -1.52
HDA1YNL021W SAE3P89114 91 aa5.57□□□□□ -1.52
HDA1YNL021W SDH7Q04401 133 aa5.57□□□□□ -1.52
HDA1YNL021W SRL1Q08673 210 aa5.57□□□□□ -1.52
HDA1YNL021W FCY2P17064 533 aa5.57□□□□□ -1.52
HDA1YNL021W YJL218WP40892 196 aaKnown RBP5.57□□□□□ -1.52
HDA1YNL021W SCW4P53334 386 aaKnown RBP5.57□□□□□ -1.52
HDA1YNL021W YBL008W-AQ3E821 79 aa5.57□□□□□ -1.52
HDA1YNL021W YBR063CP38083 404 aa5.56□□□□□ -1.52
HDA1YNL021W UFD1P53044 361 aa5.56□□□□□ -1.52
HDA1YNL021W PGA1P53896 198 aa5.56□□□□□ -1.52
HDA1YNL021W NCE101Q02820 53 aa5.56□□□□□ -1.52
HDA1YNL021W TIM22Q12328 207 aa5.56□□□□□ -1.52
HDA1YNL021W YIR021W-AQ3E739 70 aa5.56□□□□□ -1.52
HDA1YNL021W REE1P40893 198 aa5.56□□□□□ -1.52
HDA1YNL021W CAT5P41735 233 aa5.56□□□□□ -1.52
HDA1YNL021W PFS2P42841 465 aaKnown RBP5.56□□□□□ -1.52
HDA1YNL021W YGR050CP53231 118 aa5.56□□□□□ -1.52
HDA1YNL021W MRX11Q03079 207 aa5.56□□□□□ -1.52
HDA1YNL021W PRP11Q07350 266 aaPredicted RBP5.56□□□□□ -1.52
HDA1YNL021W PSF1Q12488 208 aa5.56□□□□□ -1.52
HDA1YNL021W TIM12P32830 109 aa5.55□□□□□ -1.52
HDA1YNL021W SER2P42941 309 aa5.55□□□□□ -1.52
HDA1YNL021W YGR017WP53210 297 aa5.55□□□□□ -1.52
HDA1YNL021W ZEO1Q08245 113 aa5.55□□□□□ -1.52
HDA1YNL021W ATG5Q12380 294 aa5.55□□□□□ -1.52
HDA1YNL021W CYR1P08678 2026 aaKnown RBP5.55□□□□□ -1.52
HDA1YNL021W YEL009C-AA0A023PZF2 135 aa5.54□□□□□ -1.52
HDA1YNL021W YGL041W-AP0C5N3 154 aa5.54□□□□□ -1.52
HDA1YNL021W RFC2P40348 353 aa5.54□□□□□ -1.52
HDA1YNL021W PBA1Q05778 276 aa5.54□□□□□ -1.52
HDA1YNL021W CDC7P06243 507 aa5.54□□□□□ -1.52
HDA1YNL021W SCO1P23833 295 aa5.54□□□□□ -1.52
HDA1YNL021W STP22P25604 385 aa5.54□□□□□ -1.52
HDA1YNL021W AHC2P25649 128 aa5.54□□□□□ -1.52
HDA1YNL021W PRY2P36110 329 aa5.54□□□□□ -1.52
HDA1YNL021W SRL3P36167 246 aa5.54□□□□□ -1.52
HDA1YNL021W GLE2P40066 365 aa5.54□□□□□ -1.52
HDA1YNL021W YNR062CP53748 327 aa5.54□□□□□ -1.52
HDA1YNL021W BOR1P53838 576 aa5.54□□□□□ -1.52
HDA1YNL021W YPL039WQ03080 316 aa5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 39.4 ms