RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W FMO1P38866 432 aa4.5□□□□□ -1.69
SPG4YMR107W RPB11P38902 120 aa4.5□□□□□ -1.69
SPG4YMR107W YAR068WP39564 161 aa4.5□□□□□ -1.69
SPG4YMR107W CUP9P41817 306 aa4.5□□□□□ -1.69
SPG4YMR107W MSY1P48527 492 aa4.5□□□□□ -1.69
SPG4YMR107W YDL183CP48569 320 aa4.5□□□□□ -1.69
SPG4YMR107W SSU72P53538 206 aaPredicted RBP4.5□□□□□ -1.69
SPG4YMR107W YMR090WQ04304 227 aaKnown RBP4.5□□□□□ -1.69
SPG4YMR107W TRI1Q05024 226 aa4.5□□□□□ -1.69
SPG4YMR107W CNL1Q06333 122 aa4.5□□□□□ -1.69
SPG4YMR107W HRD1Q08109 551 aa4.5□□□□□ -1.69
SPG4YMR107W YOL118CQ08259 102 aa4.5□□□□□ -1.69
SPG4YMR107W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
SPG4YMR107W SLO1Q3E784 85 aa4.5□□□□□ -1.69
SPG4YMR107W SOD1P00445 154 aaKnown RBP4.49□□□□□ -1.69
SPG4YMR107W RPP2AP05319 106 aaKnown RBP4.49□□□□□ -1.69
SPG4YMR107W SEC4P07560 215 aaKnown RBP4.49□□□□□ -1.69
SPG4YMR107W GAL7P08431 366 aa4.49□□□□□ -1.69
SPG4YMR107W YER190C-BP0CX94 160 aa4.49□□□□□ -1.69
SPG4YMR107W YEL077W-AP0CX95 160 aa4.49□□□□□ -1.69
SPG4YMR107W YGR296C-BP0CX96 160 aa4.49□□□□□ -1.69
SPG4YMR107W YPL283W-BP0CX97 160 aa4.49□□□□□ -1.69
SPG4YMR107W YPR204C-AP0CX98 160 aa4.49□□□□□ -1.69
SPG4YMR107W COX10P21592 462 aa4.49□□□□□ -1.69
SPG4YMR107W QRI5P32344 111 aa4.49□□□□□ -1.69
SPG4YMR107W YPT53P36019 220 aa4.49□□□□□ -1.69
SPG4YMR107W FMP46P36141 133 aaKnown RBP4.49□□□□□ -1.69
SPG4YMR107W WSC4P38739 605 aa4.49□□□□□ -1.69
SPG4YMR107W YNL200CP40165 246 aaKnown RBP4.49□□□□□ -1.69
SPG4YMR107W BRR6P53062 197 aa4.49□□□□□ -1.69
SPG4YMR107W YGR126WP53274 230 aa4.49□□□□□ -1.69
SPG4YMR107W PDR17P53844 350 aa4.49□□□□□ -1.69
SPG4YMR107W ERG13P54839 491 aaKnown RBP4.49□□□□□ -1.69
SPG4YMR107W TGL2P54857 326 aa4.49□□□□□ -1.69
SPG4YMR107W YMR007WQ03675 126 aa4.49□□□□□ -1.69
SPG4YMR107W NAT3Q06504 195 aa4.49□□□□□ -1.69
SPG4YMR107W YOR105WQ08504 108 aa4.49□□□□□ -1.69
SPG4YMR107W YDR524C-BQ3E6R4 66 aa4.49□□□□□ -1.69
SPG4YMR107W RPS22BQ3E7Y3 130 aaKnown RBP4.49□□□□□ -1.69
SPG4YMR107W SCS22Q6Q595 175 aa4.49□□□□□ -1.69
SPG4YMR107W QCR9P22289 66 aa4.48□□□□□ -1.69
SPG4YMR107W YKL107WP34251 309 aa4.48□□□□□ -1.69
SPG4YMR107W NTC20P38302 140 aaPredicted RBP4.48□□□□□ -1.69
SPG4YMR107W YIL163CP40448 117 aa4.48□□□□□ -1.69
SPG4YMR107W MIC26P50087 233 aa4.48□□□□□ -1.69
SPG4YMR107W NCE103P53615 221 aa4.48□□□□□ -1.69
SPG4YMR107W YPL077CQ02831 240 aa4.48□□□□□ -1.69
SPG4YMR107W TSA2Q04120 196 aa4.48□□□□□ -1.69
SPG4YMR107W GRH1Q04410 372 aaKnown RBP4.48□□□□□ -1.69
SPG4YMR107W GIM5Q04493 163 aa4.48□□□□□ -1.69
SPG4YMR107W FIT3Q08907 204 aa4.48□□□□□ -1.69
SPG4YMR107W PAI3P01094 68 aa4.47□□□□□ -1.69
SPG4YMR107W SPT15P13393 240 aaKnown RBP4.47□□□□□ -1.69
SPG4YMR107W PDE1P22434 369 aa4.47□□□□□ -1.69
SPG4YMR107W SOR1P35497 357 aaKnown RBP4.47□□□□□ -1.69
SPG4YMR107W YKR070WP36151 352 aaKnown RBP4.47□□□□□ -1.69
SPG4YMR107W CYB5P40312 120 aa4.47□□□□□ -1.69
SPG4YMR107W MSL1P40567 111 aaPredicted RBP4.47□□□□□ -1.69
SPG4YMR107W XPT1P47165 209 aa4.47□□□□□ -1.69
SPG4YMR107W HOL1P53389 586 aa4.47□□□□□ -1.69
SPG4YMR107W VPS71Q03433 280 aa4.47□□□□□ -1.69
SPG4YMR107W BET5Q03630 159 aa4.47□□□□□ -1.69
SPG4YMR107W ADH6Q04894 360 aaKnown RBP4.47□□□□□ -1.69
SPG4YMR107W PRP11Q07350 266 aaPredicted RBP4.47□□□□□ -1.69
SPG4YMR107W SOR2Q07786 357 aa4.47□□□□□ -1.69
SPG4YMR107W POC4Q12245 148 aaPredicted RBP4.47□□□□□ -1.69
SPG4YMR107W GEP5Q12393 293 aa4.47□□□□□ -1.69
SPG4YMR107W DFM1Q12743 341 aaKnown RBP4.47□□□□□ -1.69
SPG4YMR107W YKR104WP0CE69 306 aa4.46□□□□□ -1.7
SPG4YMR107W ZRT1P32804 376 aa4.46□□□□□ -1.7
SPG4YMR107W NNK1P36003 928 aa4.46□□□□□ -1.7
SPG4YMR107W SWD3P38123 315 aa4.46□□□□□ -1.7
SPG4YMR107W SNU13P39990 126 aaKnown RBP4.46□□□□□ -1.7
SPG4YMR107W MOB1P40484 314 aa4.46□□□□□ -1.7
SPG4YMR107W GZF3P42944 551 aaKnown RBP4.46□□□□□ -1.7
SPG4YMR107W YGR050CP53231 118 aa4.46□□□□□ -1.7
SPG4YMR107W COX18P53239 316 aa4.46□□□□□ -1.7
SPG4YMR107W ATG4P53867 494 aa4.46□□□□□ -1.7
SPG4YMR107W MIX17Q03667 156 aa4.46□□□□□ -1.7
SPG4YMR107W YDR391CQ04170 232 aa4.46□□□□□ -1.7
SPG4YMR107W API2Q04413 109 aa4.46□□□□□ -1.7
SPG4YMR107W TGS1Q12052 315 aa4.46□□□□□ -1.7
SPG4YMR107W PIN2Q12057 282 aa4.46□□□□□ -1.7
SPG4YMR107W YLR050CQ12155 161 aaKnown RBP4.46□□□□□ -1.7
SPG4YMR107W YLR122CQ12312 125 aa4.46□□□□□ -1.7
SPG4YMR107W UTP23Q12339 254 aaKnown RBP4.46□□□□□ -1.7
SPG4YMR107W YIL102C-AQ2V2P5 75 aa4.46□□□□□ -1.7
SPG4YMR107W YCR075W-AQ3E830 75 aa4.46□□□□□ -1.7
SPG4YMR107W GLT1Q12680 2145 aaKnown RBP4.46□□□□□ -1.7
SPG4YMR107W CUP2P15315 225 aa4.45□□□□□ -1.7
SPG4YMR107W ATP10P18496 279 aa4.45□□□□□ -1.7
SPG4YMR107W FPR1P20081 114 aaKnown RBP4.45□□□□□ -1.7
SPG4YMR107W HOG1P32485 435 aa4.45□□□□□ -1.7
SPG4YMR107W ECM14P38836 430 aa4.45□□□□□ -1.7
SPG4YMR107W ATF1P40353 525 aa4.45□□□□□ -1.7
SPG4YMR107W DFG10P40526 253 aa4.45□□□□□ -1.7
SPG4YMR107W CTK2P46962 323 aa4.45□□□□□ -1.7
SPG4YMR107W DSK2P48510 373 aa4.45□□□□□ -1.7
SPG4YMR107W YLR296WQ05898 108 aa4.45□□□□□ -1.7
SPG4YMR107W ATG33Q06485 197 aa4.45□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms