RNA–Protein interactions for RNA: YLR398C

SKI2, Transcript of Ski complex component and putative RNA helicase, yeastyeast

Gene SKI2, Length 3,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI2YLR398C YKR070WP36151 352 aaKnown RBP5.43□□□□□ -1.54
SKI2YLR398C PTH1P38876 190 aaKnown RBP5.43□□□□□ -1.54
SKI2YLR398C YJR096WP47137 282 aa5.43□□□□□ -1.54
SKI2YLR398C HUG1Q6Q5K6 68 aa5.43□□□□□ -1.54
SKI2YLR398C SOD1P00445 154 aaKnown RBP5.42□□□□□ -1.54
SKI2YLR398C RPL23AP0CX41 137 aaKnown RBP5.42□□□□□ -1.54
SKI2YLR398C RPL23BP0CX42 137 aaKnown RBP5.42□□□□□ -1.54
SKI2YLR398C YKL070WP36087 169 aa5.42□□□□□ -1.54
SKI2YLR398C YER085CP40058 173 aa5.42□□□□□ -1.54
SKI2YLR398C YFR054CP43622 192 aa5.42□□□□□ -1.54
SKI2YLR398C MIX14Q04341 121 aa5.42□□□□□ -1.54
SKI2YLR398C IRC19Q07843 230 aa5.42□□□□□ -1.54
SKI2YLR398C YOP1Q12402 180 aa5.42□□□□□ -1.54
SKI2YLR398C DDI2P0CH63 225 aa5.42□□□□□ -1.54
SKI2YLR398C DDI3P0CH64 225 aa5.42□□□□□ -1.54
SKI2YLR398C APS1P35181 156 aa5.42□□□□□ -1.54
SKI2YLR398C YKL069WP36088 180 aa5.42□□□□□ -1.54
SKI2YLR398C YIP5P53108 310 aa5.42□□□□□ -1.54
SKI2YLR398C SNT309Q06091 175 aaPredicted RBP5.42□□□□□ -1.54
SKI2YLR398C MRL1Q06815 381 aa5.42□□□□□ -1.54
SKI2YLR398C MCT1Q12283 360 aa5.42□□□□□ -1.54
SKI2YLR398C NUD1P32336 851 aa5.42□□□□□ -1.54
SKI2YLR398C FYV4P38783 130 aaPredicted RBP5.42□□□□□ -1.54
SKI2YLR398C YER188WP40103 239 aa5.42□□□□□ -1.54
SKI2YLR398C SMD3P43321 101 aaKnown RBP5.42□□□□□ -1.54
SKI2YLR398C GPI2P46961 280 aa5.42□□□□□ -1.54
SKI2YLR398C YHP1Q04116 353 aa5.42□□□□□ -1.54
SKI2YLR398C PIN2Q12057 282 aa5.42□□□□□ -1.54
SKI2YLR398C PRR2Q12310 699 aa5.42□□□□□ -1.54
SKI2YLR398C PTP1P25044 335 aa5.41□□□□□ -1.54
SKI2YLR398C DSE2P38844 325 aa5.41□□□□□ -1.54
SKI2YLR398C YIL152WP40455 235 aa5.41□□□□□ -1.54
SKI2YLR398C SHR5P41912 237 aa5.41□□□□□ -1.54
SKI2YLR398C RNH203Q12338 110 aa5.41□□□□□ -1.54
SKI2YLR398C MIG1P27705 504 aa5.41□□□□□ -1.54
SKI2YLR398C MRPS5P33759 307 aa5.41□□□□□ -1.54
SKI2YLR398C YKR041WP36134 250 aa5.41□□□□□ -1.54
SKI2YLR398C YBR090CP38253 122 aa5.41□□□□□ -1.54
SKI2YLR398C YND1P40009 630 aa5.41□□□□□ -1.54
SKI2YLR398C YGL118CP53132 145 aa5.41□□□□□ -1.54
SKI2YLR398C DUG3P53871 357 aa5.41□□□□□ -1.54
SKI2YLR398C YHM2Q04013 314 aa5.41□□□□□ -1.54
SKI2YLR398C MID2P36027 376 aa5.4□□□□□ -1.54
SKI2YLR398C YDR344CQ05510 147 aa5.4□□□□□ -1.54
SKI2YLR398C MIM1Q08176 113 aa5.4□□□□□ -1.54
SKI2YLR398C ATO3Q12359 275 aa5.4□□□□□ -1.54
SKI2YLR398C YNL208WP40159 199 aaKnown RBP5.4□□□□□ -1.55
SKI2YLR398C UBC9P50623 157 aaPredicted RBP5.4□□□□□ -1.55
SKI2YLR398C POP3P53833 195 aaPredicted RBP5.4□□□□□ -1.55
SKI2YLR398C COF1Q03048 143 aaKnown RBP5.4□□□□□ -1.55
SKI2YLR398C HPA2Q06592 156 aa5.4□□□□□ -1.55
SKI2YLR398C BSC6Q08280 497 aa5.4□□□□□ -1.55
SKI2YLR398C HTL1Q9URQ5 78 aa5.4□□□□□ -1.55
SKI2YLR398C DSS4P32601 143 aa5.4□□□□□ -1.55
SKI2YLR398C NTC20P38302 140 aaPredicted RBP5.4□□□□□ -1.55
SKI2YLR398C YNR048WP53740 393 aa5.4□□□□□ -1.55
SKI2YLR398C NRG1Q03125 231 aa5.4□□□□□ -1.55
SKI2YLR398C RPL30P14120 105 aaKnown RBP5.39□□□□□ -1.55
SKI2YLR398C AIM17P23180 465 aaKnown RBP5.39□□□□□ -1.55
SKI2YLR398C YRA2P36036 203 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
SKI2YLR398C DAD1Q12248 94 aa5.39□□□□□ -1.55
SKI2YLR398C YIL059CP40520 121 aa5.39□□□□□ -1.55
SKI2YLR398C ABM1P47146 123 aa5.39□□□□□ -1.55
SKI2YLR398C YNR040WP53736 256 aa5.39□□□□□ -1.55
SKI2YLR398C YMR166CQ03829 368 aa5.39□□□□□ -1.55
SKI2YLR398C ERV1P27882 189 aa5.39□□□□□ -1.55
SKI2YLR398C YIP1P53039 248 aa5.39□□□□□ -1.55
SKI2YLR398C LPP1Q04396 274 aa5.39□□□□□ -1.55
SKI2YLR398C DPP1Q05521 289 aa5.39□□□□□ -1.55
SKI2YLR398C THI72Q08579 599 aa5.39□□□□□ -1.55
SKI2YLR398C YOR385WQ08909 290 aa5.39□□□□□ -1.55
SKI2YLR398C GRE1Q08969 168 aa5.39□□□□□ -1.55
SKI2YLR398C USV1Q12132 391 aa5.39□□□□□ -1.55
SKI2YLR398C POC4Q12245 148 aaPredicted RBP5.39□□□□□ -1.55
SKI2YLR398C YOR192C-CQ3E736 78 aa5.39□□□□□ -1.55
SKI2YLR398C CDC36P06100 191 aaPredicted RBP5.38□□□□□ -1.55
SKI2YLR398C YSR3P23501 404 aa5.38□□□□□ -1.55
SKI2YLR398C MRP49P32388 137 aa5.38□□□□□ -1.55
SKI2YLR398C SPS18P32572 300 aa5.38□□□□□ -1.55
SKI2YLR398C MRPL27P36526 146 aaPredicted RBP5.38□□□□□ -1.55
SKI2YLR398C ALG14P38242 237 aa5.38□□□□□ -1.55
SKI2YLR398C CYB5P40312 120 aa5.38□□□□□ -1.55
SKI2YLR398C VEL1P53058 206 aa5.38□□□□□ -1.55
SKI2YLR398C YGL204CP53089 101 aa5.38□□□□□ -1.55
SKI2YLR398C YPL162CQ12042 273 aa5.38□□□□□ -1.55
SKI2YLR398C ROT1Q03691 256 aa5.38□□□□□ -1.55
SKI2YLR398C YMR082CQ04276 118 aa5.38□□□□□ -1.55
SKI2YLR398C FOL3Q12676 427 aaPredicted RBP5.38□□□□□ -1.55
SKI2YLR398C PUT1P09368 476 aa5.38□□□□□ -1.55
SKI2YLR398C BNA2P47125 453 aa5.38□□□□□ -1.55
SKI2YLR398C DSK2P48510 373 aa5.38□□□□□ -1.55
SKI2YLR398C HAA1Q12753 694 aaKnown RBP5.38□□□□□ -1.55
SKI2YLR398C YCR075W-AQ3E830 75 aa5.38□□□□□ -1.55
SKI2YLR398C MSN1P22148 382 aa5.37□□□□□ -1.55
SKI2YLR398C UTR5P32630 166 aa5.37□□□□□ -1.55
SKI2YLR398C YPR098CQ06089 161 aa5.37□□□□□ -1.55
SKI2YLR398C YOL029CQ08187 201 aa5.37□□□□□ -1.55
SKI2YLR398C PRP8P33334 2413 aaKnown RBP5.37□□□□□ -1.55
SKI2YLR398C MMF1P40185 145 aaKnown RBP5.37□□□□□ -1.55
SKI2YLR398C MIC27P50945 234 aa5.37□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms