RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C PDR17P53844 350 aa3.76□□□□□ -1.81
CDC42YLR229C SDC1Q03323 175 aa3.76□□□□□ -1.81
CDC42YLR229C YDR102CQ03864 110 aa3.76□□□□□ -1.81
CDC42YLR229C GRE1Q08969 168 aa3.76□□□□□ -1.81
CDC42YLR229C SWT1Q12104 458 aa3.76□□□□□ -1.81
CDC42YLR229C ERV2Q12284 196 aa3.76□□□□□ -1.81
CDC42YLR229C RPS25AQ3E792 108 aaPredicted RBP3.76□□□□□ -1.81
CDC42YLR229C RPL9AP05738 191 aaKnown RBP3.75□□□□□ -1.81
CDC42YLR229C DFR1P07807 211 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
CDC42YLR229C SPO13P23624 291 aa3.75□□□□□ -1.81
CDC42YLR229C COQ3P27680 312 aa3.75□□□□□ -1.81
CDC42YLR229C GLC7P32598 312 aaKnown RBP3.75□□□□□ -1.81
CDC42YLR229C RPL14AP36105 138 aaKnown RBP3.75□□□□□ -1.81
CDC42YLR229C OM14P38325 134 aa3.75□□□□□ -1.81
CDC42YLR229C RPL14BP38754 138 aaKnown RBP3.75□□□□□ -1.81
CDC42YLR229C TTI2P47168 421 aa3.75□□□□□ -1.81
CDC42YLR229C MSY1P48527 492 aa3.75□□□□□ -1.81
CDC42YLR229C MIC26P50087 233 aa3.75□□□□□ -1.81
CDC42YLR229C RPL9BP51401 191 aaKnown RBP3.75□□□□□ -1.81
CDC42YLR229C YNR064CP53750 290 aa3.75□□□□□ -1.81
CDC42YLR229C SKO1Q02100 647 aa3.75□□□□□ -1.81
CDC42YLR229C YPL067CQ02754 198 aa3.75□□□□□ -1.81
CDC42YLR229C NUP53Q03790 475 aa3.75□□□□□ -1.81
CDC42YLR229C YMR166CQ03829 368 aa3.75□□□□□ -1.81
CDC42YLR229C MIX14Q04341 121 aa3.75□□□□□ -1.81
CDC42YLR229C PRR2Q12310 699 aa3.75□□□□□ -1.81
CDC42YLR229C YLR365WQ7LIF2 110 aa3.75□□□□□ -1.81
CDC42YLR229C ATG40Q99325 256 aa3.75□□□□□ -1.81
CDC42YLR229C FAS1P07149 2051 aaKnown RBP3.75□□□□□ -1.81
CDC42YLR229C MES1P00958 751 aaKnown RBP3.74□□□□□ -1.81
CDC42YLR229C CDC36P06100 191 aaPredicted RBP3.74□□□□□ -1.81
CDC42YLR229C YGL010WP25338 174 aa3.74□□□□□ -1.81
CDC42YLR229C REC114P32841 428 aa3.74□□□□□ -1.81
CDC42YLR229C SOF1P33750 489 aaKnown RBP3.74□□□□□ -1.81
CDC42YLR229C YKL187CP34231 750 aa3.74□□□□□ -1.81
CDC42YLR229C YKL102CP34249 101 aa3.74□□□□□ -1.81
CDC42YLR229C PAU16P35994 123 aa3.74□□□□□ -1.81
CDC42YLR229C FLO5P38894 1075 aa3.74□□□□□ -1.81
CDC42YLR229C POP2P39008 433 aa3.74□□□□□ -1.81
CDC42YLR229C CYB5P40312 120 aa3.74□□□□□ -1.81
CDC42YLR229C ECO1P43605 281 aa3.74□□□□□ -1.81
CDC42YLR229C GPI2P46961 280 aa3.74□□□□□ -1.81
CDC42YLR229C YNR048WP53740 393 aa3.74□□□□□ -1.81
CDC42YLR229C YPL077CQ02831 240 aa3.74□□□□□ -1.81
CDC42YLR229C RCE1Q03530 315 aa3.74□□□□□ -1.81
CDC42YLR229C YOL024WQ08172 172 aa3.74□□□□□ -1.81
CDC42YLR229C YPL264CQ08980 353 aa3.74□□□□□ -1.81
CDC42YLR229C SMT3Q12306 101 aaKnown RBP3.74□□□□□ -1.81
CDC42YLR229C RPS22BQ3E7Y3 130 aaKnown RBP3.74□□□□□ -1.81
CDC42YLR229C ANB1P19211 157 aa3.73□□□□□ -1.81
CDC42YLR229C PCL1P24867 279 aa3.73□□□□□ -1.81
CDC42YLR229C SUA7P29055 345 aaPredicted RBP3.73□□□□□ -1.81
CDC42YLR229C AHT1P29589 182 aa3.73□□□□□ -1.81
CDC42YLR229C ERG2P32352 222 aa3.73□□□□□ -1.81
CDC42YLR229C DAD2P36162 133 aa3.73□□□□□ -1.81
CDC42YLR229C CTK2P46962 323 aa3.73□□□□□ -1.81
CDC42YLR229C THG1P53215 237 aaKnown RBP3.73□□□□□ -1.81
CDC42YLR229C LST7P53237 242 aa3.73□□□□□ -1.81
CDC42YLR229C PCP1P53259 346 aa3.73□□□□□ -1.81
CDC42YLR229C ATP23P53722 227 aa3.73□□□□□ -1.81
CDC42YLR229C STD1Q02794 444 aa3.73□□□□□ -1.81
CDC42YLR229C YDR209CQ03480 137 aa3.73□□□□□ -1.81
CDC42YLR229C YML079WQ03629 201 aa3.73□□□□□ -1.81
CDC42YLR229C HRI1Q05905 244 aaKnown RBP3.73□□□□□ -1.81
CDC42YLR229C YOR105WQ08504 108 aa3.73□□□□□ -1.81
CDC42YLR229C NAT5Q08689 176 aa3.73□□□□□ -1.81
CDC42YLR229C USB1Q12208 290 aaKnown RBP3.73□□□□□ -1.81
CDC42YLR229C FRE8Q12209 686 aa3.73□□□□□ -1.81
CDC42YLR229C HUT1Q12520 339 aa3.73□□□□□ -1.81
CDC42YLR229C FLO9P39712 1322 aa3.72□□□□□ -1.81
CDC42YLR229C POR1P04840 283 aaKnown RBP3.72□□□□□ -1.81
CDC42YLR229C RPS16AP0CX51 143 aaKnown RBP3.72□□□□□ -1.81
CDC42YLR229C RPS16BP0CX52 143 aaKnown RBP3.72□□□□□ -1.81
CDC42YLR229C RPL30P14120 105 aaKnown RBP3.72□□□□□ -1.81
CDC42YLR229C HMX1P32339 317 aa3.72□□□□□ -1.81
CDC42YLR229C MRP49P32388 137 aa3.72□□□□□ -1.81
CDC42YLR229C SPS18P32572 300 aa3.72□□□□□ -1.81
CDC42YLR229C MNS1P32906 549 aa3.72□□□□□ -1.81
CDC42YLR229C YUH1P35127 236 aa3.72□□□□□ -1.81
CDC42YLR229C HOT13P36078 116 aa3.72□□□□□ -1.81
CDC42YLR229C COX15P40086 486 aa3.72□□□□□ -1.81
CDC42YLR229C PRM5P40476 318 aa3.72□□□□□ -1.81
CDC42YLR229C RPA43P46669 326 aa3.72□□□□□ -1.81
CDC42YLR229C YGR017WP53210 297 aa3.72□□□□□ -1.81
CDC42YLR229C SSU72P53538 206 aaPredicted RBP3.72□□□□□ -1.81
CDC42YLR229C YNL092WP53934 400 aa3.72□□□□□ -1.81
CDC42YLR229C GIM5Q04493 163 aa3.72□□□□□ -1.81
CDC42YLR229C NAT3Q06504 195 aa3.72□□□□□ -1.81
CDC42YLR229C YPL257WQ08974 193 aa3.72□□□□□ -1.81
CDC42YLR229C COA2Q3E823 68 aa3.72□□□□□ -1.81
CDC42YLR229C LDB16P25587 256 aa3.71□□□□□ -1.82
CDC42YLR229C PEX4P29340 183 aa3.71□□□□□ -1.82
CDC42YLR229C OCH1P31755 480 aa3.71□□□□□ -1.82
CDC42YLR229C UTR5P32630 166 aa3.71□□□□□ -1.82
CDC42YLR229C SWD2P36104 329 aaPredicted RBP3.71□□□□□ -1.82
CDC42YLR229C RPF1P38805 295 aaKnown RBP3.71□□□□□ -1.82
CDC42YLR229C YND1P40009 630 aa3.71□□□□□ -1.82
CDC42YLR229C PRE5P40302 234 aaKnown RBP3.71□□□□□ -1.82
CDC42YLR229C CDC40P40968 455 aaPredicted RBP3.71□□□□□ -1.82
CDC42YLR229C YGL118CP53132 145 aa3.71□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 59.7 ms