RNA–Protein interactions for RNA: YLR062C

BUD28, Transcript of Dubious open reading frame, yeastyeast

Gene BUD28, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD28YLR062C DYN2Q02647 92 aa3.91□□□□□ -1.78
BUD28YLR062C PRM4Q12498 284 aa3.91□□□□□ -1.78
BUD28YLR062C PET494P07390 489 aaPredicted RBP3.9□□□□□ -1.79
BUD28YLR062C RPS8AP0CX39 200 aaKnown RBP3.9□□□□□ -1.79
BUD28YLR062C RPS8BP0CX40 200 aaKnown RBP3.9□□□□□ -1.79
BUD28YLR062C URA5P13298 226 aaKnown RBP3.9□□□□□ -1.79
BUD28YLR062C YKL162CP36052 402 aa3.9□□□□□ -1.79
BUD28YLR062C IMD2P38697 523 aaKnown RBP3.9□□□□□ -1.79
BUD28YLR062C DOG2P38773 246 aa3.9□□□□□ -1.79
BUD28YLR062C DOG1P38774 246 aa3.9□□□□□ -1.79
BUD28YLR062C NSA2P40078 261 aaKnown RBP3.9□□□□□ -1.79
BUD28YLR062C SWT21P53873 357 aaPredicted RBP3.9□□□□□ -1.79
BUD28YLR062C YPS3Q12303 508 aa3.9□□□□□ -1.79
BUD28YLR062C MRS3P10566 314 aa3.89□□□□□ -1.79
BUD28YLR062C GRX2P17695 143 aaKnown RBP3.89□□□□□ -1.79
BUD28YLR062C AUA1P32450 94 aa3.89□□□□□ -1.79
BUD28YLR062C SDH4P37298 181 aa3.89□□□□□ -1.79
BUD28YLR062C YIR035CP40579 254 aa3.89□□□□□ -1.79
BUD28YLR062C YGR210CP42942 411 aa3.89□□□□□ -1.79
BUD28YLR062C DUO1P53168 247 aaKnown RBP3.89□□□□□ -1.79
BUD28YLR062C HCH1P53834 153 aa3.89□□□□□ -1.79
BUD28YLR062C YIF1P53845 314 aaKnown RBP3.89□□□□□ -1.79
BUD28YLR062C ACT1P60010 375 aaKnown RBP3.89□□□□□ -1.79
BUD28YLR062C GRH1Q04410 372 aaKnown RBP3.89□□□□□ -1.79
BUD28YLR062C YLR281CQ05863 155 aa3.89□□□□□ -1.79
BUD28YLR062C FRQ1Q06389 190 aa3.89□□□□□ -1.79
BUD28YLR062C YPL264CQ08980 353 aa3.89□□□□□ -1.79
BUD28YLR062C TFB5Q3E7C1 72 aaPredicted RBP3.89□□□□□ -1.79
BUD28YLR062C DIF1O13577 133 aa3.88□□□□□ -1.79
BUD28YLR062C COX2P00410 251 aa3.88□□□□□ -1.79
BUD28YLR062C CYC3P06182 269 aa3.88□□□□□ -1.79
BUD28YLR062C SEC22P22214 214 aa3.88□□□□□ -1.79
BUD28YLR062C ALK2P32789 676 aaPredicted RBP3.88□□□□□ -1.79
BUD28YLR062C PDC2P32896 925 aa3.88□□□□□ -1.79
BUD28YLR062C YBL071CP38185 102 aa3.88□□□□□ -1.79
BUD28YLR062C CDS1P38221 457 aa3.88□□□□□ -1.79
BUD28YLR062C ECM33P38248 429 aaKnown RBP3.88□□□□□ -1.79
BUD28YLR062C RTC3P38804 111 aaPredicted RBP3.88□□□□□ -1.79
BUD28YLR062C WSS1P38838 269 aa3.88□□□□□ -1.79
BUD28YLR062C MPC2P38857 129 aa3.88□□□□□ -1.79
BUD28YLR062C RPL13BP40212 199 aaKnown RBP3.88□□□□□ -1.79
BUD28YLR062C ECM27P47144 725 aa3.88□□□□□ -1.79
BUD28YLR062C BUL1P48524 976 aa3.88□□□□□ -1.79
BUD28YLR062C CAX4P53223 239 aa3.88□□□□□ -1.79
BUD28YLR062C LRS4Q04087 347 aaKnown RBP3.88□□□□□ -1.79
BUD28YLR062C YPR013CQ12145 317 aa3.88□□□□□ -1.79
BUD28YLR062C AIM45Q12480 344 aaKnown RBP3.88□□□□□ -1.79
BUD28YLR062C RPL13AQ12690 199 aaPredicted RBP3.88□□□□□ -1.79
BUD28YLR062C COA2Q3E823 68 aa3.88□□□□□ -1.79
BUD28YLR062C TAR1Q8TGM6 124 aa3.88□□□□□ -1.79
BUD28YLR062C RRT1P38192 103 aa3.87□□□□□ -1.79
BUD28YLR062C QDR3P38227 689 aa3.87□□□□□ -1.79
BUD28YLR062C FLO5P38894 1075 aa3.87□□□□□ -1.79
BUD28YLR062C URM1P40554 99 aaPredicted RBP3.87□□□□□ -1.79
BUD28YLR062C HXT14P42833 540 aa3.87□□□□□ -1.79
BUD28YLR062C YPI1P43587 155 aa3.87□□□□□ -1.79
BUD28YLR062C YGR018CP53211 109 aa3.87□□□□□ -1.79
BUD28YLR062C GPI15P53961 229 aa3.87□□□□□ -1.79
BUD28YLR062C YDR274CP87283 123 aa3.87□□□□□ -1.79
BUD28YLR062C MSC3Q05812 728 aa3.87□□□□□ -1.79
BUD28YLR062C DCS1Q06151 350 aa3.87□□□□□ -1.79
BUD28YLR062C RRT7Q07829 113 aa3.87□□□□□ -1.79
BUD28YLR062C POC4Q12245 148 aaPredicted RBP3.87□□□□□ -1.79
BUD28YLR062C PAA1Q12447 191 aaKnown RBP3.87□□□□□ -1.79
BUD28YLR062C FCY2P17064 533 aa3.86□□□□□ -1.79
BUD28YLR062C YCR022CP25620 114 aa3.86□□□□□ -1.79
BUD28YLR062C TIP1P27654 210 aaPredicted RBP3.86□□□□□ -1.79
BUD28YLR062C POP5P28005 173 aa3.86□□□□□ -1.79
BUD28YLR062C FPR2P32472 135 aa3.86□□□□□ -1.79
BUD28YLR062C CSH1P38287 376 aa3.86□□□□□ -1.79
BUD28YLR062C SLM6P38343 150 aa3.86□□□□□ -1.79
BUD28YLR062C BDH1P39714 382 aa3.86□□□□□ -1.79
BUD28YLR062C YEA6P39953 335 aa3.86□□□□□ -1.79
BUD28YLR062C GET2P40056 285 aa3.86□□□□□ -1.79
BUD28YLR062C POR2P40478 281 aa3.86□□□□□ -1.79
BUD28YLR062C YJL027CP47063 138 aaPredicted RBP3.86□□□□□ -1.79
BUD28YLR062C YAP1802P53309 568 aa3.86□□□□□ -1.79
BUD28YLR062C PDR17P53844 350 aa3.86□□□□□ -1.79
BUD28YLR062C ERV25P54837 211 aaKnown RBP3.86□□□□□ -1.79
BUD28YLR062C YMR090WQ04304 227 aaKnown RBP3.86□□□□□ -1.79
BUD28YLR062C ATG39Q06159 398 aa3.86□□□□□ -1.79
BUD28YLR062C TIM18Q08749 192 aa3.86□□□□□ -1.79
BUD28YLR062C USV1Q12132 391 aa3.86□□□□□ -1.79
BUD28YLR062C ISN1Q99312 450 aa3.86□□□□□ -1.79
BUD28YLR062C PIS1P06197 220 aaKnown RBP3.85□□□□□ -1.79
BUD28YLR062C YRA2P36036 203 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
BUD28YLR062C AVT5P38176 459 aa3.85□□□□□ -1.79
BUD28YLR062C SNU13P39990 126 aaKnown RBP3.85□□□□□ -1.79
BUD28YLR062C YER137CP40083 148 aaKnown RBP3.85□□□□□ -1.79
BUD28YLR062C POS5Q06892 414 aa3.85□□□□□ -1.79
BUD28YLR062C RPS25BP0C0T4 108 aaKnown RBP3.84□□□□□ -1.79
BUD28YLR062C YCR025CP25352 136 aa3.84□□□□□ -1.79
BUD28YLR062C PPQ1P32945 549 aa3.84□□□□□ -1.79
BUD28YLR062C RRF1P38771 230 aa3.84□□□□□ -1.79
BUD28YLR062C MST28P39552 234 aa3.84□□□□□ -1.79
BUD28YLR062C RTS2P40962 232 aa3.84□□□□□ -1.79
BUD28YLR062C AGX1P43567 385 aa3.84□□□□□ -1.79
BUD28YLR062C PKP2P53170 491 aa3.84□□□□□ -1.79
BUD28YLR062C MST27P53176 234 aa3.84□□□□□ -1.79
BUD28YLR062C TIM44Q01852 431 aa3.84□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 131.9 ms