RNA–Protein interactions for RNA: YKL185W

ASH1, Transcript of Component of the Rpd3L histone deacetylase complex, yeast

Gene ASH1, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cellular bud, Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ASH1	YKL185W	ARR3	Q06598	404 aa		4.76	□□□□□ -1.65
ASH1	YKL185W	LDS2	Q08218	356 aa		4.76	□□□□□ -1.65
ASH1	YKL185W	YOR105W	Q08504	108 aa		4.76	□□□□□ -1.65
ASH1	YKL185W	YBR255C-A	Q3E776	120 aa		4.76	□□□□□ -1.65
ASH1	YKL185W	YAL064W-B	O13512	126 aa		4.75	□□□□□ -1.65
ASH1	YKL185W	RPS22A	P0C0W1	130 aa	Known RBP	4.75	□□□□□ -1.65
ASH1	YKL185W	YKL102C	P34249	101 aa		4.75	□□□□□ -1.65
ASH1	YKL185W	PAM17	P36147	197 aa		4.75	□□□□□ -1.65
ASH1	YKL185W	PRE5	P40302	234 aa	Known RBP	4.75	□□□□□ -1.65
ASH1	YKL185W	GPI2	P46961	280 aa		4.75	□□□□□ -1.65
ASH1	YKL185W	COQ11	Q05892	277 aa		4.75	□□□□□ -1.65
ASH1	YKL185W	LOA1	Q06508	300 aa		4.75	□□□□□ -1.65
ASH1	YKL185W	PAM18	Q07914	168 aa		4.75	□□□□□ -1.65
ASH1	YKL185W	YOL029C	Q08187	201 aa		4.75	□□□□□ -1.65
ASH1	YKL185W	YOR186W	Q08560	144 aa		4.75	□□□□□ -1.65
ASH1	YKL185W	RDL2	Q08742	149 aa	Known RBP	4.75	□□□□□ -1.65
ASH1	YKL185W	FRE8	Q12209	686 aa		4.75	□□□□□ -1.65
ASH1	YKL185W	SMT3	Q12306	101 aa	Known RBP	4.75	□□□□□ -1.65
ASH1	YKL185W	ACC1	Q00955	2233 aa	Known RBP	4.74	□□□□□ -1.65
ASH1	YKL185W	IRA2	P19158	3079 aa		4.74	□□□□□ -1.65
ASH1	YKL185W	ADE8	P04161	214 aa		4.74	□□□□□ -1.65
ASH1	YKL185W	YPR170W-B	P0C5R9	85 aa		4.74	□□□□□ -1.65
ASH1	YKL185W	FCY2	P17064	533 aa		4.74	□□□□□ -1.65
ASH1	YKL185W	PEX4	P29340	183 aa		4.74	□□□□□ -1.65
ASH1	YKL185W	YBL059W	P34224	193 aa		4.74	□□□□□ -1.65
ASH1	YKL185W	RPF1	P38805	295 aa	Known RBP	4.74	□□□□□ -1.65
ASH1	YKL185W	TEM1	P38987	245 aa		4.74	□□□□□ -1.65
ASH1	YKL185W	BDH1	P39714	382 aa		4.74	□□□□□ -1.65
ASH1	YKL185W	YIL169C	P40442	995 aa		4.74	□□□□□ -1.65
ASH1	YKL185W	YIL163C	P40448	117 aa		4.74	□□□□□ -1.65
ASH1	YKL185W	CIN5	P40917	295 aa		4.74	□□□□□ -1.65
ASH1	YKL185W	TAF4	P50105	388 aa		4.74	□□□□□ -1.65
ASH1	YKL185W	LCL3	P53153	274 aa		4.74	□□□□□ -1.65
ASH1	YKL185W	GEP7	P53171	287 aa		4.74	□□□□□ -1.65
ASH1	YKL185W	TRI1	Q05024	226 aa		4.74	□□□□□ -1.65
ASH1	YKL185W	HNT3	Q08702	217 aa		4.74	□□□□□ -1.65
ASH1	YKL185W	YCR024C-B	Q3E7Z8	88 aa		4.74	□□□□□ -1.65
ASH1	YKL185W	YHR214C-E	Q8TGK0	99 aa		4.74	□□□□□ -1.65
ASH1	YKL185W	SAL1	D6W196	494 aa		4.73	□□□□□ -1.65
ASH1	YKL185W	DDI2	P0CH63	225 aa		4.73	□□□□□ -1.65
ASH1	YKL185W	DDI3	P0CH64	225 aa		4.73	□□□□□ -1.65
ASH1	YKL185W	RPL30	P14120	105 aa	Known RBP	4.73	□□□□□ -1.65
ASH1	YKL185W	PHD1	P36093	366 aa		4.73	□□□□□ -1.65
ASH1	YKL185W	PRY2	P36110	329 aa		4.73	□□□□□ -1.65
ASH1	YKL185W	RPA43	P46669	326 aa		4.73	□□□□□ -1.65
ASH1	YKL185W	DIG2	Q03373	323 aa	Known RBP	4.73	□□□□□ -1.65
ASH1	YKL185W	GIM5	Q04493	163 aa		4.73	□□□□□ -1.65
ASH1	YKL185W	YFH1	Q07540	174 aa		4.73	□□□□□ -1.65
ASH1	YKL185W	YOL118C	Q08259	102 aa		4.73	□□□□□ -1.65
ASH1	YKL185W	TGS1	Q12052	315 aa		4.73	□□□□□ -1.65
ASH1	YKL185W	SWT1	Q12104	458 aa		4.73	□□□□□ -1.65
ASH1	YKL185W	YIL046W-A	Q3E7Z4	54 aa		4.73	□□□□□ -1.65
ASH1	YKL185W	IRA1	P18963	3092 aa		4.73	□□□□□ -1.65
ASH1	YKL185W	NOP1	P15646	327 aa	Known RBP	4.73	□□□□□ -1.65
ASH1	YKL185W	HMX1	P32339	317 aa		4.73	□□□□□ -1.65
ASH1	YKL185W	SWD3	P38123	315 aa		4.73	□□□□□ -1.65
ASH1	YKL185W	SRP14	P38985	146 aa		4.73	□□□□□ -1.65
ASH1	YKL185W	DFG10	P40526	253 aa		4.73	□□□□□ -1.65
ASH1	YKL185W	YGR050C	P53231	118 aa		4.73	□□□□□ -1.65
ASH1	YKL185W	YNR048W	P53740	393 aa		4.73	□□□□□ -1.65
ASH1	YKL185W	MSC3	Q05812	728 aa		4.73	□□□□□ -1.65
ASH1	YKL185W	NIP7	Q08962	181 aa	Known RBP	4.73	□□□□□ -1.65
ASH1	YKL185W	YOR192C-C	Q3E736	78 aa		4.73	□□□□□ -1.65
ASH1	YKL185W	SCS22	Q6Q595	175 aa		4.73	□□□□□ -1.65
ASH1	YKL185W	SOD1	P00445	154 aa	Known RBP	4.72	□□□□□ -1.65
ASH1	YKL185W	CUP2	P15315	225 aa		4.72	□□□□□ -1.65
ASH1	YKL185W	YKL107W	P34251	309 aa		4.72	□□□□□ -1.65
ASH1	YKL185W	PMU1	P36069	295 aa		4.72	□□□□□ -1.65
ASH1	YKL185W	YKR073C	P36153	106 aa		4.72	□□□□□ -1.65
ASH1	YKL185W	YBR184W	P38299	523 aa		4.72	□□□□□ -1.65
ASH1	YKL185W	DER1	P38307	211 aa		4.72	□□□□□ -1.65
ASH1	YKL185W	COX15	P40086	486 aa		4.72	□□□□□ -1.65
ASH1	YKL185W	HNT2	P49775	206 aa		4.72	□□□□□ -1.65
ASH1	YKL185W	YIP5	P53108	310 aa		4.72	□□□□□ -1.65
ASH1	YKL185W	YMR166C	Q03829	368 aa		4.72	□□□□□ -1.65
ASH1	YKL185W	CNL1	Q06333	122 aa		4.72	□□□□□ -1.65
ASH1	YKL185W	RFU1	Q08003	200 aa		4.72	□□□□□ -1.65
ASH1	YKL185W	CSM4	Q08955	156 aa		4.72	□□□□□ -1.65
ASH1	YKL185W	YPL257W	Q08974	193 aa		4.72	□□□□□ -1.65
ASH1	YKL185W	GEP5	Q12393	293 aa		4.72	□□□□□ -1.65
ASH1	YKL185W	COX1	P00401	534 aa		4.71	□□□□□ -1.66
ASH1	YKL185W	HEM13	P11353	328 aa	Known RBP	4.71	□□□□□ -1.66
ASH1	YKL185W	MSI1	P13712	422 aa		4.71	□□□□□ -1.66
ASH1	YKL185W	CDC26	P14724	124 aa		4.71	□□□□□ -1.66
ASH1	YKL185W	RPI1	P23250	407 aa	Known RBP	4.71	□□□□□ -1.66
ASH1	YKL185W	GSP1	P32835	219 aa	Known RBP	4.71	□□□□□ -1.66
ASH1	YKL185W	GSP2	P32836	220 aa	Known RBP	4.71	□□□□□ -1.66
ASH1	YKL185W	SHO1	P40073	367 aa		4.71	□□□□□ -1.66
ASH1	YKL185W	XPT1	P47165	209 aa		4.71	□□□□□ -1.66
ASH1	YKL185W	PGU1	P47180	361 aa		4.71	□□□□□ -1.66
ASH1	YKL185W	MSY1	P48527	492 aa		4.71	□□□□□ -1.66
ASH1	YKL185W	YPL162C	Q12042	273 aa		4.71	□□□□□ -1.66
ASH1	YKL185W	POC4	Q12245	148 aa	Predicted RBP	4.71	□□□□□ -1.66
ASH1	YKL185W	SEC4	P07560	215 aa	Known RBP	4.7	□□□□□ -1.66
ASH1	YKL185W	SOF1	P33750	489 aa	Known RBP	4.7	□□□□□ -1.66
ASH1	YKL185W	MTR2	P34232	184 aa	Known RBP	4.7	□□□□□ -1.66
ASH1	YKL185W	UTH1	P36135	365 aa		4.7	□□□□□ -1.66
ASH1	YKL185W	LSM2	P38203	95 aa	Known RBP	4.7	□□□□□ -1.66
ASH1	YKL185W	YBR090C	P38253	122 aa		4.7	□□□□□ -1.66
ASH1	YKL185W	UME6	P39001	836 aa		4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 68.8 ms