RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W COG7P53195 279 aa3.05□□□□□ -1.92
NUP85YJR042W YPL257WQ08974 193 aa3.05□□□□□ -1.92
NUP85YJR042W YOR289WQ12012 251 aaPredicted RBP3.05□□□□□ -1.92
NUP85YJR042W TIM22Q12328 207 aa3.05□□□□□ -1.92
NUP85YJR042W HMS1Q12398 434 aa3.05□□□□□ -1.92
NUP85YJR042W TFC7Q12415 435 aa3.05□□□□□ -1.92
NUP85YJR042W PET9P18239 318 aaKnown RBP3.04□□□□□ -1.92
NUP85YJR042W YBR242WP38331 238 aa3.04□□□□□ -1.92
NUP85YJR042W VMA7P39111 118 aa3.04□□□□□ -1.92
NUP85YJR042W YEL073CP39974 107 aa3.04□□□□□ -1.92
NUP85YJR042W EDC2P40023 145 aaPredicted RBP3.04□□□□□ -1.92
NUP85YJR042W YIL024CP40543 189 aa3.04□□□□□ -1.92
NUP85YJR042W CAT5P41735 233 aa3.04□□□□□ -1.92
NUP85YJR042W CCC1P47818 322 aa3.04□□□□□ -1.92
NUP85YJR042W YGL101WP53144 215 aa3.04□□□□□ -1.92
NUP85YJR042W WSC2P53832 503 aa3.04□□□□□ -1.92
NUP85YJR042W AIM36Q03798 255 aa3.04□□□□□ -1.92
NUP85YJR042W YPL278CQ08990 100 aa3.04□□□□□ -1.92
NUP85YJR042W OCH1P31755 480 aa3.04□□□□□ -1.92
NUP85YJR042W HYM1P32464 399 aa3.04□□□□□ -1.92
NUP85YJR042W SHE1P38200 338 aa3.04□□□□□ -1.92
NUP85YJR042W CFD1P40558 293 aa3.04□□□□□ -1.92
NUP85YJR042W SDT1P53078 280 aa3.04□□□□□ -1.92
NUP85YJR042W CAB4P53332 305 aa3.04□□□□□ -1.92
NUP85YJR042W ARL3Q02804 198 aa3.04□□□□□ -1.92
NUP85YJR042W RNH202Q05635 350 aa3.04□□□□□ -1.92
NUP85YJR042W DGA1Q08650 418 aa3.04□□□□□ -1.92
NUP85YJR042W RRG7Q08774 242 aaPredicted RBP3.04□□□□□ -1.92
NUP85YJR042W YOR214CQ12282 236 aa3.04□□□□□ -1.92
NUP85YJR042W YEL009C-AA0A023PZF2 135 aa3.03□□□□□ -1.92
NUP85YJR042W IPP1P00817 287 aaKnown RBP3.03□□□□□ -1.92
NUP85YJR042W SIR2P06700 562 aa3.03□□□□□ -1.92
NUP85YJR042W MRPL39P36533 70 aa3.03□□□□□ -1.92
NUP85YJR042W YEA4P40004 342 aa3.03□□□□□ -1.92
NUP85YJR042W APQ12P40532 138 aa3.03□□□□□ -1.92
NUP85YJR042W GPI14P47088 403 aaKnown RBP3.03□□□□□ -1.92
NUP85YJR042W PGA1P53896 198 aa3.03□□□□□ -1.92
NUP85YJR042W SPS2P08459 502 aa3.03□□□□□ -1.93
NUP85YJR042W SPO13P23624 291 aa3.03□□□□□ -1.93
NUP85YJR042W PGD1P40356 397 aa3.03□□□□□ -1.93
NUP85YJR042W PFS2P42841 465 aaKnown RBP3.03□□□□□ -1.93
NUP85YJR042W ATG18P43601 500 aa3.03□□□□□ -1.93
NUP85YJR042W MDM32Q12171 622 aa3.03□□□□□ -1.93
NUP85YJR042W YBR298C-AQ8TGK4 73 aa3.03□□□□□ -1.93
NUP85YJR042W YMR316C-AI2HB70 103 aa3.02□□□□□ -1.93
NUP85YJR042W MBF1O14467 151 aaKnown RBP3.02□□□□□ -1.93
NUP85YJR042W PRE7P23724 241 aaKnown RBP3.02□□□□□ -1.93
NUP85YJR042W COS10P52924 374 aa3.02□□□□□ -1.93
NUP85YJR042W EMC4P53073 190 aa3.02□□□□□ -1.93
NUP85YJR042W ELP6Q04868 273 aa3.02□□□□□ -1.93
NUP85YJR042W AKR2Q12013 749 aa3.02□□□□□ -1.93
NUP85YJR042W ATX2Q12067 313 aa3.02□□□□□ -1.93
NUP85YJR042W ATO3Q12359 275 aa3.02□□□□□ -1.93
NUP85YJR042W YFR032C-BQ8TGU2 87 aa3.02□□□□□ -1.93
NUP85YJR042W MSB2P32334 1306 aa3.02□□□□□ -1.93
NUP85YJR042W MSI1P13712 422 aa3.01□□□□□ -1.93
NUP85YJR042W GSP1P32835 219 aaKnown RBP3.01□□□□□ -1.93
NUP85YJR042W GSP2P32836 220 aaKnown RBP3.01□□□□□ -1.93
NUP85YJR042W SMP1P38128 452 aa3.01□□□□□ -1.93
NUP85YJR042W RPE1P46969 238 aa3.01□□□□□ -1.93
NUP85YJR042W YGR219WP53307 113 aa3.01□□□□□ -1.93
NUP85YJR042W DID2P69771 204 aa3.01□□□□□ -1.93
NUP85YJR042W THI74Q04083 370 aa3.01□□□□□ -1.93
NUP85YJR042W MPD1Q12404 318 aaKnown RBP3.01□□□□□ -1.93
NUP85YJR042W MRP49P32388 137 aa3.01□□□□□ -1.93
NUP85YJR042W TMA19P35691 167 aaKnown RBP3.01□□□□□ -1.93
NUP85YJR042W MOH1P38191 138 aa3.01□□□□□ -1.93
NUP85YJR042W HPA3P39979 161 aa3.01□□□□□ -1.93
NUP85YJR042W PRM5P40476 318 aa3.01□□□□□ -1.93
NUP85YJR042W ERJ5P43613 295 aaPredicted RBP3.01□□□□□ -1.93
NUP85YJR042W BAT2P47176 376 aaKnown RBP3.01□□□□□ -1.93
NUP85YJR042W YPL039WQ03080 316 aa3.01□□□□□ -1.93
NUP85YJR042W FSH2Q05015 223 aa3.01□□□□□ -1.93
NUP85YJR042W YDL180WQ12301 547 aa3.01□□□□□ -1.93
NUP85YJR042W ATG5Q12380 294 aa3.01□□□□□ -1.93
NUP85YJR042W YLR099W-AQ3E798 87 aa3.01□□□□□ -1.93
NUP85YJR042W YGL041W-AP0C5N3 154 aa3□□□□□ -1.93
NUP85YJR042W SHE2P36068 246 aaKnown RBP RIP-Chip data3□□□□□ -1.93not detected
NUP85YJR042W NCA3P46955 337 aa3□□□□□ -1.93
NUP85YJR042W DML1Q03652 475 aa3□□□□□ -1.93
NUP85YJR042W INP1Q03694 420 aa3□□□□□ -1.93
NUP85YJR042W YMR244WQ04018 355 aa3□□□□□ -1.93
NUP85YJR042W GRH1Q04410 372 aaKnown RBP3□□□□□ -1.93
NUP85YJR042W ERP1Q05359 219 aaKnown RBP3□□□□□ -1.93
NUP85YJR042W YLR179CQ06252 201 aaKnown RBP3□□□□□ -1.93
NUP85YJR042W CRC1Q12289 327 aa3□□□□□ -1.93
NUP85YJR042W YBL008W-AQ3E821 79 aa3□□□□□ -1.93
NUP85YJR042W MDM35O60200 86 aa3□□□□□ -1.93
NUP85YJR042W Q0255P03881 472 aa3□□□□□ -1.93
NUP85YJR042W RPL25P04456 142 aaKnown RBP3□□□□□ -1.93
NUP85YJR042W RPL30P14120 105 aaKnown RBP3□□□□□ -1.93
NUP85YJR042W RNP1P32385 249 aa3□□□□□ -1.93
NUP85YJR042W PRY2P36110 329 aa3□□□□□ -1.93
NUP85YJR042W RPS20P38701 121 aaKnown RBP3□□□□□ -1.93
NUP85YJR042W LSM12P38828 187 aaKnown RBP3□□□□□ -1.93
NUP85YJR042W AIM2P39721 246 aa3□□□□□ -1.93
NUP85YJR042W SWM2P40342 146 aa3□□□□□ -1.93
NUP85YJR042W FIP1P45976 327 aa3□□□□□ -1.93
NUP85YJR042W PAU12P53343 120 aa3□□□□□ -1.93
NUP85YJR042W FEX1Q08913 375 aa3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 42.9 ms