RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C MNS1P32906 549 aa2.97□□□□□ -1.93
SSM4YIL030C SWD3P38123 315 aa2.97□□□□□ -1.93
SSM4YIL030C UBS1P38290 277 aa2.97□□□□□ -1.93
SSM4YIL030C ARC40P38328 384 aaKnown RBP2.97□□□□□ -1.93
SSM4YIL030C CIN5P40917 295 aa2.97□□□□□ -1.93
SSM4YIL030C IRC19Q07843 230 aa2.97□□□□□ -1.93
SSM4YIL030C PRP46Q12417 451 aaPredicted RBP2.97□□□□□ -1.93
SSM4YIL030C POP7P38291 140 aa2.96□□□□□ -1.93
SSM4YIL030C SOH1P38633 127 aa2.96□□□□□ -1.93
SSM4YIL030C GPP2P40106 250 aaKnown RBP2.96□□□□□ -1.93
SSM4YIL030C YPL073CP40323 161 aa2.96□□□□□ -1.93
SSM4YIL030C HNT2P49775 206 aa2.96□□□□□ -1.93
SSM4YIL030C TRM9P49957 279 aa2.96□□□□□ -1.93
SSM4YIL030C YGR018CP53211 109 aa2.96□□□□□ -1.93
SSM4YIL030C GIM3P53900 129 aa2.96□□□□□ -1.93
SSM4YIL030C TFB5Q3E7C1 72 aaPredicted RBP2.96□□□□□ -1.93
SSM4YIL030C FMP49A0A023PZB3 126 aa2.96□□□□□ -1.94
SSM4YIL030C TY1A-HP0C2I4 478 aaKnown RBP2.96□□□□□ -1.94
SSM4YIL030C YCR006CP25350 157 aa2.96□□□□□ -1.94
SSM4YIL030C NTC20P38302 140 aaPredicted RBP2.96□□□□□ -1.94
SSM4YIL030C PDR17P53844 350 aa2.96□□□□□ -1.94
SSM4YIL030C DIG2Q03373 323 aaKnown RBP2.96□□□□□ -1.94
SSM4YIL030C INP1Q03694 420 aa2.96□□□□□ -1.94
SSM4YIL030C YHM2Q04013 314 aa2.96□□□□□ -1.94
SSM4YIL030C NAT3Q06504 195 aa2.96□□□□□ -1.94
SSM4YIL030C OPI10Q08202 246 aa2.96□□□□□ -1.94
SSM4YIL030C GLC7P32598 312 aaKnown RBP2.96□□□□□ -1.94
SSM4YIL030C GPI18P38211 433 aa2.96□□□□□ -1.94
SSM4YIL030C IRC22P40006 225 aa2.96□□□□□ -1.94
SSM4YIL030C YJR015WP47090 510 aa2.96□□□□□ -1.94
SSM4YIL030C SEI1Q06058 285 aa2.96□□□□□ -1.94
SSM4YIL030C MRPL23Q12487 163 aaPredicted RBP2.96□□□□□ -1.94
SSM4YIL030C DFR1P07807 211 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
SSM4YIL030C CPR2P23285 205 aa2.95□□□□□ -1.94
SSM4YIL030C YKL044WP36092 106 aa2.95□□□□□ -1.94
SSM4YIL030C STS1P38637 319 aa2.95□□□□□ -1.94
SSM4YIL030C YND1P40009 630 aa2.95□□□□□ -1.94
SSM4YIL030C PRE5P40302 234 aaKnown RBP2.95□□□□□ -1.94
SSM4YIL030C OGG1P53397 376 aaPredicted RBP2.95□□□□□ -1.94
SSM4YIL030C APS2Q00381 147 aa2.95□□□□□ -1.94
SSM4YIL030C YPR098CQ06089 161 aa2.95□□□□□ -1.94
SSM4YIL030C LOA1Q06508 300 aa2.95□□□□□ -1.94
SSM4YIL030C YLR146W-AQ2V2P1 62 aa2.95□□□□□ -1.94
SSM4YIL030C YCL001W-BQ96VH2 84 aa2.95□□□□□ -1.94
SSM4YIL030C KRE1P17260 313 aa2.95□□□□□ -1.94
SSM4YIL030C YCR023CP25351 611 aa2.95□□□□□ -1.94
SSM4YIL030C HSP150P32478 413 aa2.95□□□□□ -1.94
SSM4YIL030C SWS2P53937 143 aa2.95□□□□□ -1.94
SSM4YIL030C FCF1Q05498 189 aaPredicted RBP2.95□□□□□ -1.94
SSM4YIL030C PRP11Q07350 266 aaPredicted RBP2.95□□□□□ -1.94
SSM4YIL030C USV1Q12132 391 aa2.95□□□□□ -1.94
SSM4YIL030C UTP23Q12339 254 aaKnown RBP2.95□□□□□ -1.94
SSM4YIL030C IRA1P18963 3092 aa2.95□□□□□ -1.94
SSM4YIL030C YCR022CP25620 114 aa2.95□□□□□ -1.94
SSM4YIL030C YHL037CP38733 133 aa2.95□□□□□ -1.94
SSM4YIL030C SHO1P40073 367 aa2.95□□□□□ -1.94
SSM4YIL030C YIP3P53633 176 aa2.95□□□□□ -1.94
SSM4YIL030C MRP51Q02950 344 aa2.95□□□□□ -1.94
SSM4YIL030C HMS1Q12398 434 aa2.95□□□□□ -1.94
SSM4YIL030C ZRT1P32804 376 aa2.94□□□□□ -1.94
SSM4YIL030C RPL14AP36105 138 aaKnown RBP2.94□□□□□ -1.94
SSM4YIL030C RPL14BP38754 138 aaKnown RBP2.94□□□□□ -1.94
SSM4YIL030C YHR173CP38864 112 aa2.94□□□□□ -1.94
SSM4YIL030C SNO3P43544 222 aa2.94□□□□□ -1.94
SSM4YIL030C COX18P53239 316 aa2.94□□□□□ -1.94
SSM4YIL030C YOL118CQ08259 102 aa2.94□□□□□ -1.94
SSM4YIL030C PRM3Q08931 133 aa2.94□□□□□ -1.94
SSM4YIL030C MSI1P13712 422 aa2.94□□□□□ -1.94
SSM4YIL030C MTC7P32633 139 aa2.94□□□□□ -1.94
SSM4YIL030C BDH1P39714 382 aa2.94□□□□□ -1.94
SSM4YIL030C YAP1802P53309 568 aa2.94□□□□□ -1.94
SSM4YIL030C ATG21Q02887 496 aa2.94□□□□□ -1.94
SSM4YIL030C GRH1Q04410 372 aaKnown RBP2.94□□□□□ -1.94
SSM4YIL030C USB1Q12208 290 aaKnown RBP2.94□□□□□ -1.94
SSM4YIL030C YDL180WQ12301 547 aa2.94□□□□□ -1.94
SSM4YIL030C MRS1P07266 363 aa2.94□□□□□ -1.94
SSM4YIL030C RPL30P14120 105 aaKnown RBP2.94□□□□□ -1.94
SSM4YIL030C HOG1P32485 435 aa2.94□□□□□ -1.94
SSM4YIL030C LDH1P38139 375 aa2.94□□□□□ -1.94
SSM4YIL030C YNL198CP40166 100 aa2.94□□□□□ -1.94
SSM4YIL030C GEP5Q12393 293 aa2.93□□□□□ -1.94
SSM4YIL030C TCA17P32613 152 aa2.93□□□□□ -1.94
SSM4YIL030C UPS2P35200 230 aa2.93□□□□□ -1.94
SSM4YIL030C BAT1P38891 393 aaKnown RBP2.93□□□□□ -1.94
SSM4YIL030C YER134CP40081 178 aa2.93□□□□□ -1.94
SSM4YIL030C PRY1P47032 299 aa2.93□□□□□ -1.94
SSM4YIL030C RPL21AQ02753 160 aaKnown RBP2.93□□□□□ -1.94
SSM4YIL030C YOR015WQ12169 119 aa2.93□□□□□ -1.94
SSM4YIL030C SWM1Q12379 170 aa2.93□□□□□ -1.94
SSM4YIL030C RPL21BQ12672 160 aaKnown RBP2.93□□□□□ -1.94
SSM4YIL030C SOD1P00445 154 aaKnown RBP2.93□□□□□ -1.94
SSM4YIL030C YPS1P32329 569 aa2.93□□□□□ -1.94
SSM4YIL030C MRPS5P33759 307 aa2.93□□□□□ -1.94
SSM4YIL030C YPL067CQ02754 198 aa2.93□□□□□ -1.94
SSM4YIL030C UPS3Q04006 179 aa2.93□□□□□ -1.94
SSM4YIL030C HEM4P06174 275 aa2.93□□□□□ -1.94
SSM4YIL030C PRY2P36110 329 aa2.93□□□□□ -1.94
SSM4YIL030C COX16P47081 118 aa2.93□□□□□ -1.94
SSM4YIL030C BNA2P47125 453 aa2.93□□□□□ -1.94
SSM4YIL030C BRR6P53062 197 aa2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms