RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeastyeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDX1YGR193C RSM10Q03201 203 aa3.07□□□□□ -1.92
PDX1YGR193C BET5Q03630 159 aa3.07□□□□□ -1.92
PDX1YGR193C CUE4Q04201 117 aaPredicted RBP3.07□□□□□ -1.92
PDX1YGR193C FIT1Q04433 528 aa3.07□□□□□ -1.92
PDX1YGR193C YDL242WQ07746 117 aa3.07□□□□□ -1.92
PDX1YGR193C ATG5Q12380 294 aa3.07□□□□□ -1.92
PDX1YGR193C PDR11P40550 1411 aa3.07□□□□□ -1.92
PDX1YGR193C THO2P53552 1597 aaKnown RBP3.07□□□□□ -1.92
PDX1YGR193C TY1B-DR5P0C2I2 1755 aa3.07□□□□□ -1.92
PDX1YGR193C TY1B-DR6P0C2I3 1755 aa3.07□□□□□ -1.92
PDX1YGR193C TY1B-LR2P0C2I5 1755 aa3.07□□□□□ -1.92
PDX1YGR193C TY1B-LR3P0C2I6 1755 aaKnown RBP3.07□□□□□ -1.92
PDX1YGR193C TY1B-PR1P0C2I9 1755 aaKnown RBP3.07□□□□□ -1.92
PDX1YGR193C TY1B-PR3P0C2J1 1755 aaKnown RBP3.07□□□□□ -1.92
PDX1YGR193C TY1B-JR1P47098 1755 aa3.07□□□□□ -1.92
PDX1YGR193C TY1B-ML2Q03434 1755 aaKnown RBP3.07□□□□□ -1.92
PDX1YGR193C TY1B-ER1Q03612 1755 aa3.07□□□□□ -1.92
PDX1YGR193C TY1B-ML1Q04711 1755 aaKnown RBP3.07□□□□□ -1.92
PDX1YGR193C TY1B-GR2Q12269 1755 aa3.07□□□□□ -1.92
PDX1YGR193C TY1B-OLQ12273 1755 aa3.07□□□□□ -1.92
PDX1YGR193C TY1B-PLQ12414 1755 aaKnown RBP3.07□□□□□ -1.92
PDX1YGR193C MBF1O14467 151 aaKnown RBP3.06□□□□□ -1.92
PDX1YGR193C YPR170W-BP0C5R9 85 aa3.06□□□□□ -1.92
PDX1YGR193C CSE2P33308 149 aa3.06□□□□□ -1.92
PDX1YGR193C TMA19P35691 167 aaKnown RBP3.06□□□□□ -1.92
PDX1YGR193C STU1P38198 1513 aa3.06□□□□□ -1.92
PDX1YGR193C NSG1P38837 291 aa3.06□□□□□ -1.92
PDX1YGR193C AVT2P39981 480 aa3.06□□□□□ -1.92
PDX1YGR193C PEX17P40155 199 aa3.06□□□□□ -1.92
PDX1YGR193C AVT7P40501 490 aa3.06□□□□□ -1.92
PDX1YGR193C FIP1P45976 327 aa3.06□□□□□ -1.92
PDX1YGR193C TDA4P47153 279 aa3.06□□□□□ -1.92
PDX1YGR193C YGR164WP53291 111 aa3.06□□□□□ -1.92
PDX1YGR193C ALG9P53868 555 aaKnown RBP3.06□□□□□ -1.92
PDX1YGR193C RCE1Q03530 315 aa3.06□□□□□ -1.92
PDX1YGR193C SEN15Q04675 128 aa3.06□□□□□ -1.92
PDX1YGR193C FCF1Q05498 189 aaPredicted RBP3.06□□□□□ -1.92
PDX1YGR193C FIT3Q08907 204 aa3.06□□□□□ -1.92
PDX1YGR193C YPL264CQ08980 353 aa3.06□□□□□ -1.92
PDX1YGR193C YPL162CQ12042 273 aa3.06□□□□□ -1.92
PDX1YGR193C TIR4Q12218 487 aaPredicted RBP3.06□□□□□ -1.92
PDX1YGR193C YOR097CQ12274 175 aaPredicted RBP3.06□□□□□ -1.92
PDX1YGR193C NUP159P40477 1460 aa3.05□□□□□ -1.92
PDX1YGR193C MSW1P04803 379 aa3.05□□□□□ -1.92
PDX1YGR193C NOP1P15646 327 aaKnown RBP3.05□□□□□ -1.92
PDX1YGR193C TOM40P23644 387 aaKnown RBP3.05□□□□□ -1.92
PDX1YGR193C YGL010WP25338 174 aa3.05□□□□□ -1.92
PDX1YGR193C MRPL11P36521 249 aaPredicted RBP3.05□□□□□ -1.92
PDX1YGR193C RIM2P38127 377 aa3.05□□□□□ -1.92
PDX1YGR193C YBL081WP38180 368 aaKnown RBP3.05□□□□□ -1.92
PDX1YGR193C ANS1P38832 159 aa3.05□□□□□ -1.92
PDX1YGR193C YAR029WP39549 74 aa3.05□□□□□ -1.92
PDX1YGR193C YER188WP40103 239 aa3.05□□□□□ -1.92
PDX1YGR193C YIL169CP40442 995 aa3.05□□□□□ -1.92
PDX1YGR193C HYR1P40581 163 aaKnown RBP3.05□□□□□ -1.92
PDX1YGR193C YGL088WP53151 121 aa3.05□□□□□ -1.92
PDX1YGR193C AAH1P53909 347 aa3.05□□□□□ -1.92
PDX1YGR193C YNL046WP53956 172 aa3.05□□□□□ -1.92
PDX1YGR193C NUP100Q02629 959 aa3.05□□□□□ -1.92
PDX1YGR193C YPL039WQ03080 316 aa3.05□□□□□ -1.92
PDX1YGR193C SCW10Q04951 389 aa3.05□□□□□ -1.92
PDX1YGR193C GAT3Q07928 141 aa3.05□□□□□ -1.92
PDX1YGR193C YOL160WQ08321 113 aa3.05□□□□□ -1.92
PDX1YGR193C YDR029WQ12111 104 aa3.05□□□□□ -1.92
PDX1YGR193C PCC1Q3E833 88 aa3.05□□□□□ -1.92
PDX1YGR193C YOS1Q3E834 85 aa3.05□□□□□ -1.92
PDX1YGR193C DDP1Q99321 188 aaKnown RBP3.05□□□□□ -1.92
PDX1YGR193C ECM12O13529 151 aa3.04□□□□□ -1.92
PDX1YGR193C CPA1P07258 411 aaKnown RBP3.04□□□□□ -1.92
PDX1YGR193C VMA11P32842 164 aa3.04□□□□□ -1.92
PDX1YGR193C YKL097CP34245 136 aa3.04□□□□□ -1.92
PDX1YGR193C CSH1P38287 376 aa3.04□□□□□ -1.92
PDX1YGR193C CUP9P41817 306 aa3.04□□□□□ -1.92
PDX1YGR193C YFL065CP43539 102 aa3.04□□□□□ -1.92
PDX1YGR193C WWM1P43582 211 aaKnown RBP3.04□□□□□ -1.92
PDX1YGR193C NMA2P53204 395 aa3.04□□□□□ -1.92
PDX1YGR193C THG1P53215 237 aaKnown RBP3.04□□□□□ -1.92
PDX1YGR193C YGR050CP53231 118 aa3.04□□□□□ -1.92
PDX1YGR193C BUD25P85052 153 aa3.04□□□□□ -1.92
PDX1YGR193C GAS3Q03655 524 aa3.04□□□□□ -1.92
PDX1YGR193C YMR090WQ04304 227 aaKnown RBP3.04□□□□□ -1.92
PDX1YGR193C RAF1Q06891 181 aa3.04□□□□□ -1.92
PDX1YGR193C YPR203WQ08994 102 aa3.04□□□□□ -1.92
PDX1YGR193C HTL1Q9URQ5 78 aa3.04□□□□□ -1.92
PDX1YGR193C SWR1Q05471 1514 aa3.03□□□□□ -1.92
PDX1YGR193C SPT6P23615 1451 aaKnown RBP3.03□□□□□ -1.92
PDX1YGR193C TY1B-GR3Q12316 1755 aa3.03□□□□□ -1.92
PDX1YGR193C TY1B-ORQ92393 1755 aa3.03□□□□□ -1.92
PDX1YGR193C TRP1P00912 224 aa3.03□□□□□ -1.92
PDX1YGR193C Q0255P03881 472 aa3.03□□□□□ -1.92
PDX1YGR193C YRA2P36036 203 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
PDX1YGR193C SFT2P38166 215 aa3.03□□□□□ -1.92
PDX1YGR193C GEP4P38812 185 aa3.03□□□□□ -1.92
PDX1YGR193C CCS1P40202 249 aaKnown RBP3.03□□□□□ -1.92
PDX1YGR193C MPM1P40364 252 aa3.03□□□□□ -1.92
PDX1YGR193C DFG10P40526 253 aa3.03□□□□□ -1.92
PDX1YGR193C MSL1P40567 111 aaPredicted RBP3.03□□□□□ -1.92
PDX1YGR193C DIM1P41819 318 aaKnown RBP3.03□□□□□ -1.92
PDX1YGR193C CWP2P43497 92 aa3.03□□□□□ -1.92
PDX1YGR193C CLD1P53264 445 aa3.03□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms