RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	YFL054C	P43549	646 aa		5.25	□□□□□ -1.57
VMA3	YEL027W	PHO23	P50947	330 aa		5.25	□□□□□ -1.57
VMA3	YEL027W	YGR151C	P53287	111 aa		5.25	□□□□□ -1.57
VMA3	YEL027W	SSU72	P53538	206 aa	Predicted RBP	5.25	□□□□□ -1.57
VMA3	YEL027W	PDR17	P53844	350 aa		5.25	□□□□□ -1.57
VMA3	YEL027W	YNL234W	P53857	426 aa		5.25	□□□□□ -1.57
VMA3	YEL027W	ZEO1	Q08245	113 aa		5.25	□□□□□ -1.57
VMA3	YEL027W	SRL1	Q08673	210 aa		5.25	□□□□□ -1.57
VMA3	YEL027W	AGC1	Q12482	902 aa		5.25	□□□□□ -1.57
VMA3	YEL027W	SIP1	P32578	815 aa		5.24	□□□□□ -1.57
VMA3	YEL027W	YBR184W	P38299	523 aa		5.24	□□□□□ -1.57
VMA3	YEL027W	PSD1	P39006	500 aa		5.24	□□□□□ -1.57
VMA3	YEL027W	COX15	P40086	486 aa		5.24	□□□□□ -1.57
VMA3	YEL027W	MOG1	P47123	218 aa		5.24	□□□□□ -1.57
VMA3	YEL027W	ERG25	P53045	309 aa		5.24	□□□□□ -1.57
VMA3	YEL027W	SNO1	Q03144	224 aa		5.24	□□□□□ -1.57
VMA3	YEL027W	DAL4	Q04895	635 aa		5.24	□□□□□ -1.57
VMA3	YEL027W	TMA10	Q06177	86 aa		5.24	□□□□□ -1.57
VMA3	YEL027W	YPR063C	Q12160	140 aa		5.24	□□□□□ -1.57
VMA3	YEL027W	FCY1	Q12178	158 aa		5.24	□□□□□ -1.57
VMA3	YEL027W	YPS3	Q12303	508 aa		5.24	□□□□□ -1.57
VMA3	YEL027W	JID1	Q12350	301 aa		5.24	□□□□□ -1.57
VMA3	YEL027W	YDR157W	A0A023PZE8	133 aa		5.23	□□□□□ -1.57
VMA3	YEL027W	UPS2	P35200	230 aa		5.23	□□□□□ -1.57
VMA3	YEL027W	NSA2	P40078	261 aa	Known RBP	5.23	□□□□□ -1.57
VMA3	YEL027W	DFG10	P40526	253 aa		5.23	□□□□□ -1.57
VMA3	YEL027W	CRH1	P53301	507 aa		5.23	□□□□□ -1.57
VMA3	YEL027W	YNR066C	P53752	436 aa		5.23	□□□□□ -1.57
VMA3	YEL027W	HCH1	P53834	153 aa		5.23	□□□□□ -1.57
VMA3	YEL027W	YCL001W-A	P87012	153 aa		5.23	□□□□□ -1.57
VMA3	YEL027W	YLR179C	Q06252	201 aa	Known RBP	5.23	□□□□□ -1.57
VMA3	YEL027W	PRR2	Q12310	699 aa		5.23	□□□□□ -1.57
VMA3	YEL027W	FCY2	P17064	533 aa		5.22	□□□□□ -1.57
VMA3	YEL027W	TOM40	P23644	387 aa	Known RBP	5.22	□□□□□ -1.57
VMA3	YEL027W	YCR025C	P25352	136 aa		5.22	□□□□□ -1.57
VMA3	YEL027W	YKR045C	P36138	183 aa		5.22	□□□□□ -1.57
VMA3	YEL027W	EMC5	P40540	141 aa		5.22	□□□□□ -1.57
VMA3	YEL027W	FMP41	P53889	259 aa	Known RBP	5.22	□□□□□ -1.57
VMA3	YEL027W	DYN2	Q02647	92 aa		5.22	□□□□□ -1.57
VMA3	YEL027W	YMR166C	Q03829	368 aa		5.22	□□□□□ -1.57
VMA3	YEL027W	MCH1	Q07376	486 aa		5.22	□□□□□ -1.57
VMA3	YEL027W	YPR145C-A	Q2V2P0	78 aa		5.22	□□□□□ -1.57
VMA3	YEL027W	CMC2	Q3E7A4	109 aa		5.22	□□□□□ -1.57
VMA3	YEL027W	RPS25B	P0C0T4	108 aa	Known RBP	5.21	□□□□□ -1.58
VMA3	YEL027W	ZRC1	P20107	442 aa		5.21	□□□□□ -1.58
VMA3	YEL027W	WSS1	P38838	269 aa		5.21	□□□□□ -1.58
VMA3	YEL027W	PEX7	P39108	375 aa		5.21	□□□□□ -1.58
VMA3	YEL027W	POG1	P40473	351 aa		5.21	□□□□□ -1.58
VMA3	YEL027W	YJL163C	P46996	555 aa		5.21	□□□□□ -1.58
VMA3	YEL027W	YDL186W	P48568	277 aa		5.21	□□□□□ -1.58
VMA3	YEL027W	MRPS17	Q03246	237 aa	Predicted RBP	5.21	□□□□□ -1.58
VMA3	YEL027W	FRQ1	Q06389	190 aa		5.21	□□□□□ -1.58
VMA3	YEL027W	TDA6	Q06466	467 aa		5.21	□□□□□ -1.58
VMA3	YEL027W	RAD28	Q12021	506 aa		5.21	□□□□□ -1.58
VMA3	YEL027W	RKI1	Q12189	258 aa		5.21	□□□□□ -1.58
VMA3	YEL027W	RPS25A	Q3E792	108 aa	Predicted RBP	5.21	□□□□□ -1.58
VMA3	YEL027W	FEN2	P25621	512 aa	Known RBP	5.2	□□□□□ -1.58
VMA3	YEL027W	FPR2	P32472	135 aa		5.2	□□□□□ -1.58
VMA3	YEL027W	YNK1	P36010	153 aa	Known RBP	5.2	□□□□□ -1.58
VMA3	YEL027W	PRY2	P36110	329 aa		5.2	□□□□□ -1.58
VMA3	YEL027W	ATG8	P38182	117 aa	RIP-Chip data	5.2	□□□□□ -1.58	not detected
VMA3	YEL027W	ICS2	P38284	255 aa		5.2	□□□□□ -1.58
VMA3	YEL027W	YBR292C	P38357	123 aa		5.2	□□□□□ -1.58
VMA3	YEL027W	SPC25	P40014	221 aa		5.2	□□□□□ -1.58
VMA3	YEL027W	YJL213W	P40896	331 aa		5.2	□□□□□ -1.58
VMA3	YEL027W	LST8	P41318	303 aa		5.2	□□□□□ -1.58
VMA3	YEL027W	HXT14	P42833	540 aa		5.2	□□□□□ -1.58
VMA3	YEL027W	AIM24	P47127	394 aa		5.2	□□□□□ -1.58
VMA3	YEL027W	YAP1802	P53309	568 aa		5.2	□□□□□ -1.58
VMA3	YEL027W	LRS4	Q04087	347 aa	Known RBP	5.2	□□□□□ -1.58
VMA3	YEL027W	NDE2	Q07500	545 aa		5.2	□□□□□ -1.58
VMA3	YEL027W	YDL242W	Q07746	117 aa		5.2	□□□□□ -1.58
VMA3	YEL027W	USV1	Q12132	391 aa		5.2	□□□□□ -1.58
VMA3	YEL027W	POC4	Q12245	148 aa	Predicted RBP	5.2	□□□□□ -1.58
VMA3	YEL027W	DCN1	Q12395	269 aa		5.2	□□□□□ -1.58
VMA3	YEL027W	ILV5	P06168	395 aa	Known RBP	5.19	□□□□□ -1.58
VMA3	YEL027W	MRS3	P10566	314 aa		5.19	□□□□□ -1.58
VMA3	YEL027W	MSK1	P32048	576 aa		5.19	□□□□□ -1.58
VMA3	YEL027W	ACP1	P32463	125 aa		5.19	□□□□□ -1.58
VMA3	YEL027W	SHG1	P38337	142 aa		5.19	□□□□□ -1.58
VMA3	YEL027W	YPT31	P38555	223 aa	Known RBP	5.19	□□□□□ -1.58
VMA3	YEL027W	YGR269W	P40326	108 aa		5.19	□□□□□ -1.58
VMA3	YEL027W	TAX4	P47030	604 aa		5.19	□□□□□ -1.58
VMA3	YEL027W	SDO1	Q07953	250 aa	Known RBP	5.19	□□□□□ -1.58
VMA3	YEL027W	YGR035W-A	Q45U48	73 aa		5.19	□□□□□ -1.58
VMA3	YEL027W	SOD1	P00445	154 aa	Known RBP	5.18	□□□□□ -1.58
VMA3	YEL027W	YER190C-B	P0CX94	160 aa		5.18	□□□□□ -1.58
VMA3	YEL027W	YEL077W-A	P0CX95	160 aa		5.18	□□□□□ -1.58
VMA3	YEL027W	YGR296C-B	P0CX96	160 aa		5.18	□□□□□ -1.58
VMA3	YEL027W	YPL283W-B	P0CX97	160 aa		5.18	□□□□□ -1.58
VMA3	YEL027W	YPR204C-A	P0CX98	160 aa		5.18	□□□□□ -1.58
VMA3	YEL027W	YFL068W	P0CX99	160 aa		5.18	□□□□□ -1.58
VMA3	YEL027W	YLL066W-A	P0CY00	160 aa		5.18	□□□□□ -1.58
VMA3	YEL027W	YLL067W-A	P0CY01	160 aa		5.18	□□□□□ -1.58
VMA3	YEL027W	RPB3	P16370	318 aa	Known RBP	5.18	□□□□□ -1.58
VMA3	YEL027W	YCR041W	P37265	110 aa		5.18	□□□□□ -1.58
VMA3	YEL027W	AVT5	P38176	459 aa		5.18	□□□□□ -1.58
VMA3	YEL027W	DAN1	P47178	298 aa		5.18	□□□□□ -1.58
VMA3	YEL027W	ERV14	P53173	138 aa		5.18	□□□□□ -1.58
VMA3	YEL027W	BOR1	P53838	576 aa		5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 175.7 ms