RNA–Protein interactions for RNA: YDR477W

SNF1, Transcript of AMP-activated serine/threonine protein kinase, yeastyeast

Gene SNF1, Length 1,902 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF1YDR477W SMT3Q12306 101 aaKnown RBP8.6□□□□□ -1.03
SNF1YDR477W SOF1P33750 489 aaKnown RBP8.59□□□□□ -1.03
SNF1YDR477W DER1P38307 211 aa8.59□□□□□ -1.03
SNF1YDR477W PCL7P40186 285 aa8.59□□□□□ -1.03
SNF1YDR477W YDR366CP87287 132 aa8.59□□□□□ -1.03
SNF1YDR477W THI72Q08579 599 aa8.59□□□□□ -1.03
SNF1YDR477W HTB1P02293 131 aaKnown RBP8.58□□□□□ -1.04
SNF1YDR477W HTB2P02294 131 aa8.58□□□□□ -1.04
SNF1YDR477W RPS16AP0CX51 143 aaKnown RBP8.58□□□□□ -1.04
SNF1YDR477W RPS16BP0CX52 143 aaKnown RBP8.58□□□□□ -1.04
SNF1YDR477W CWP1P28319 239 aa8.58□□□□□ -1.04
SNF1YDR477W UBS1P38290 277 aa8.58□□□□□ -1.04
SNF1YDR477W PRM5P40476 318 aa8.58□□□□□ -1.04
SNF1YDR477W CFD1P40558 293 aa8.58□□□□□ -1.04
SNF1YDR477W YNL165WP53891 406 aa8.58□□□□□ -1.04
SNF1YDR477W RFU1Q08003 200 aa8.58□□□□□ -1.04
SNF1YDR477W GEP5Q12393 293 aa8.58□□□□□ -1.04
SNF1YDR477W SRP21P32342 167 aa8.58□□□□□ -1.04
SNF1YDR477W PHD1P36093 366 aa8.58□□□□□ -1.04
SNF1YDR477W YKR073CP36153 106 aa8.58□□□□□ -1.04
SNF1YDR477W YBR090CP38253 122 aa8.58□□□□□ -1.04
SNF1YDR477W RPA43P46669 326 aa8.58□□□□□ -1.04
SNF1YDR477W ARP3P47117 449 aaKnown RBP8.58□□□□□ -1.04
SNF1YDR477W YMR166CQ03829 368 aa8.58□□□□□ -1.04
SNF1YDR477W GRE1Q08969 168 aa8.58□□□□□ -1.04
SNF1YDR477W POM34Q12445 299 aa8.58□□□□□ -1.04
SNF1YDR477W YIL046W-AQ3E7Z4 54 aa8.58□□□□□ -1.04
SNF1YDR477W SOD1P00445 154 aaKnown RBP8.57□□□□□ -1.04
SNF1YDR477W MSI1P13712 422 aa8.57□□□□□ -1.04
SNF1YDR477W RNA15P25299 296 aaPredicted RBP8.57□□□□□ -1.04
SNF1YDR477W IMP1P28627 190 aa8.57□□□□□ -1.04
SNF1YDR477W HMX1P32339 317 aa8.57□□□□□ -1.04
SNF1YDR477W NTC20P38302 140 aaPredicted RBP8.57□□□□□ -1.04
SNF1YDR477W DFG10P40526 253 aa8.57□□□□□ -1.04
SNF1YDR477W PGU1P47180 361 aa8.57□□□□□ -1.04
SNF1YDR477W DSK2P48510 373 aa8.57□□□□□ -1.04
SNF1YDR477W BEM2P39960 2167 aaKnown RBP8.57□□□□□ -1.04
SNF1YDR477W ADH2P00331 348 aaKnown RBP8.56□□□□□ -1.04
SNF1YDR477W YBR184WP38299 523 aa8.56□□□□□ -1.04
SNF1YDR477W TEM1P38987 245 aa8.56□□□□□ -1.04
SNF1YDR477W PRE5P40302 234 aaKnown RBP8.56□□□□□ -1.04
SNF1YDR477W CYB5P40312 120 aa8.56□□□□□ -1.04
SNF1YDR477W XPT1P47165 209 aa8.56□□□□□ -1.04
SNF1YDR477W ATG40Q99325 256 aa8.56□□□□□ -1.04
SNF1YDR477W COX2P00410 251 aa8.56□□□□□ -1.04
SNF1YDR477W IMG2P25642 146 aaPredicted RBP8.56□□□□□ -1.04
SNF1YDR477W REE1P40893 198 aa8.56□□□□□ -1.04
SNF1YDR477W CPD1P53314 239 aa8.56□□□□□ -1.04
SNF1YDR477W TNA1P53322 534 aa8.56□□□□□ -1.04
SNF1YDR477W IZH3Q07959 543 aa8.56□□□□□ -1.04
SNF1YDR477W CUP2P15315 225 aa8.55□□□□□ -1.04
SNF1YDR477W MCH2P36032 473 aa8.55□□□□□ -1.04
SNF1YDR477W UPS3Q04006 179 aa8.55□□□□□ -1.04
SNF1YDR477W YMR254CQ04838 102 aa8.55□□□□□ -1.04
SNF1YDR477W YDL180WQ12301 547 aa8.55□□□□□ -1.04
SNF1YDR477W YPR170W-BP0C5R9 85 aa8.54□□□□□ -1.04
SNF1YDR477W GSP1P32835 219 aaKnown RBP8.54□□□□□ -1.04
SNF1YDR477W GSP2P32836 220 aaKnown RBP8.54□□□□□ -1.04
SNF1YDR477W WSC2P53832 503 aa8.54□□□□□ -1.04
SNF1YDR477W TRI1Q05024 226 aa8.54□□□□□ -1.04
SNF1YDR477W CSM4Q08955 156 aa8.54□□□□□ -1.04
SNF1YDR477W BOL1Q3E793 110 aa8.54□□□□□ -1.04
SNF1YDR477W YHR214C-DP0CX93 97 aa8.54□□□□□ -1.04
SNF1YDR477W YJR015WP47090 510 aa8.54□□□□□ -1.04
SNF1YDR477W ECM18Q04623 453 aa8.54□□□□□ -1.04
SNF1YDR477W MRL1Q06815 381 aa8.54□□□□□ -1.04
SNF1YDR477W PRE1P22141 198 aaKnown RBP8.53□□□□□ -1.04
SNF1YDR477W SOH1P38633 127 aa8.53□□□□□ -1.04
SNF1YDR477W THG1P53215 237 aaKnown RBP8.53□□□□□ -1.04
SNF1YDR477W BOR1P53838 576 aa8.53□□□□□ -1.04
SNF1YDR477W RPS22BQ3E7Y3 130 aaKnown RBP8.53□□□□□ -1.04
SNF1YDR477W MTR2P34232 184 aaKnown RBP8.52□□□□□ -1.04
SNF1YDR477W UME6P39001 836 aa8.52□□□□□ -1.04
SNF1YDR477W YIL029CP40538 142 aa8.52□□□□□ -1.04
SNF1YDR477W OST1P41543 476 aaKnown RBP8.52□□□□□ -1.04
SNF1YDR477W DYN2Q02647 92 aa8.52□□□□□ -1.04
SNF1YDR477W CNL1Q06333 122 aa8.52□□□□□ -1.04
SNF1YDR477W HRD1Q08109 551 aa8.52□□□□□ -1.04
SNF1YDR477W SEC4P07560 215 aaKnown RBP8.52□□□□□ -1.05
SNF1YDR477W ERS1P17261 260 aa8.52□□□□□ -1.05
SNF1YDR477W LPP1Q04396 274 aa8.52□□□□□ -1.05
SNF1YDR477W RPS2P25443 254 aaKnown RBP8.51□□□□□ -1.05
SNF1YDR477W ATG21Q02887 496 aa8.51□□□□□ -1.05
SNF1YDR477W SDC1Q03323 175 aa8.51□□□□□ -1.05
SNF1YDR477W YPL162CQ12042 273 aa8.51□□□□□ -1.05
SNF1YDR477W YMR316C-AI2HB70 103 aa8.5□□□□□ -1.05
SNF1YDR477W MRS3P10566 314 aa8.5□□□□□ -1.05
SNF1YDR477W SEC11P15367 167 aa8.5□□□□□ -1.05
SNF1YDR477W PSD1P39006 500 aa8.5□□□□□ -1.05
SNF1YDR477W LTP1P40347 161 aa8.5□□□□□ -1.05
SNF1YDR477W YGL230CP53074 147 aa8.5□□□□□ -1.05
SNF1YDR477W CGI121Q03705 181 aaKnown RBP8.5□□□□□ -1.05
SNF1YDR477W PRP11Q07350 266 aaPredicted RBP8.5□□□□□ -1.05
SNF1YDR477W SCS22Q6Q595 175 aa8.5□□□□□ -1.05
SNF1YDR477W ROX3P25046 220 aa8.5□□□□□ -1.05
SNF1YDR477W QRI5P32344 111 aa8.5□□□□□ -1.05
SNF1YDR477W AIM29P36154 155 aa8.5□□□□□ -1.05
SNF1YDR477W MIX14Q04341 121 aa8.5□□□□□ -1.05
SNF1YDR477W YPS3Q12303 508 aa8.5□□□□□ -1.05
SNF1YDR477W YER190C-BP0CX94 160 aa8.49□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 10 ms