RNA–Protein interactions for RNA: YDR261C-D

YDR261C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR261C-D, Length 4,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR261C-D	YDR261C-D	EMC4	P53073	190 aa		4	□□□□□ -1.77
YDR261C-D	YDR261C-D	LPP1	Q04396	274 aa		4	□□□□□ -1.77
YDR261C-D	YDR261C-D	COQ10	Q08058	207 aa		4	□□□□□ -1.77
YDR261C-D	YDR261C-D	YCR024C-B	Q3E7Z8	88 aa		4	□□□□□ -1.77
YDR261C-D	YDR261C-D	RPL28	P02406	149 aa	Known RBP	4	□□□□□ -1.77
YDR261C-D	YDR261C-D	OPI3	P05375	206 aa		4	□□□□□ -1.77
YDR261C-D	YDR261C-D	RPS28B	P0C0X0	67 aa	Known RBP	4	□□□□□ -1.77
YDR261C-D	YDR261C-D	YKR051W	P36142	418 aa		4	□□□□□ -1.77
YDR261C-D	YDR261C-D	MSA2	P36157	363 aa		4	□□□□□ -1.77
YDR261C-D	YDR261C-D	YBR209W	P38311	105 aa		4	□□□□□ -1.77
YDR261C-D	YDR261C-D	YGR079W	P53249	370 aa		4	□□□□□ -1.77
YDR261C-D	YDR261C-D	SHH3	Q04487	196 aa		4	□□□□□ -1.77
YDR261C-D	YDR261C-D	MRPL23	Q12487	163 aa	Predicted RBP	4	□□□□□ -1.77
YDR261C-D	YDR261C-D	RPS28A	Q3E7X9	67 aa	Predicted RBP	4	□□□□□ -1.77
YDR261C-D	YDR261C-D	YER158C	P40095	573 aa		4	□□□□□ -1.77
YDR261C-D	YDR261C-D	HUR1	P45820	110 aa		4	□□□□□ -1.77
YDR261C-D	YDR261C-D	DAN4	P47179	1161 aa		4	□□□□□ -1.77
YDR261C-D	YDR261C-D	MRPS8	Q03799	155 aa		4	□□□□□ -1.77
YDR261C-D	YDR261C-D	YPR064W	Q12492	139 aa		4	□□□□□ -1.77
YDR261C-D	YDR261C-D	TIF6	Q12522	245 aa	Known RBP	4	□□□□□ -1.77
YDR261C-D	YDR261C-D	RFA2	P26754	273 aa	Known RBP	3.99	□□□□□ -1.77
YDR261C-D	YDR261C-D	YOR062C	P36025	268 aa		3.99	□□□□□ -1.77
YDR261C-D	YDR261C-D	FKH2	P41813	862 aa		3.99	□□□□□ -1.77
YDR261C-D	YDR261C-D	YIP1	P53039	248 aa		3.99	□□□□□ -1.77
YDR261C-D	YDR261C-D	SPG4	Q04438	115 aa		3.99	□□□□□ -1.77
YDR261C-D	YDR261C-D	RPO31	P04051	1460 aa		3.99	□□□□□ -1.77
YDR261C-D	YDR261C-D	HSL1	P34244	1518 aa		3.99	□□□□□ -1.77
YDR261C-D	YDR261C-D	TY3B-I	Q7LHG5	1498 aa	Known RBP	3.99	□□□□□ -1.77
YDR261C-D	YDR261C-D	YOR186W	Q08560	144 aa		3.99	□□□□□ -1.77
YDR261C-D	YDR261C-D	ENV10	Q99382	181 aa		3.99	□□□□□ -1.77
YDR261C-D	YDR261C-D	MRPL39	P36533	70 aa		3.99	□□□□□ -1.77
YDR261C-D	YDR261C-D	PAU24	P38155	120 aa		3.99	□□□□□ -1.77
YDR261C-D	YDR261C-D	SAF1	P38352	637 aa		3.99	□□□□□ -1.77
YDR261C-D	YDR261C-D	YGR050C	P53231	118 aa		3.99	□□□□□ -1.77
YDR261C-D	YDR261C-D	RSM19	P53733	91 aa	Predicted RBP	3.99	□□□□□ -1.77
YDR261C-D	YDR261C-D	PPT2	Q12036	173 aa		3.99	□□□□□ -1.77
YDR261C-D	YDR261C-D	TAH1	P25638	111 aa	Predicted RBP	3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	YKL102C	P34249	101 aa		3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	SMP1	P38128	452 aa		3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	HTD2	P38790	280 aa	Known RBP	3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	YHR097C	P38809	366 aa	Known RBP	3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	FIP1	P45976	327 aa		3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	YMR103C	Q04436	120 aa		3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	POC4	Q12245	148 aa	Predicted RBP	3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	CYC7	P00045	113 aa		3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	AHT1	P29589	182 aa		3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	MSN2	P33748	704 aa		3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	YKL044W	P36092	106 aa		3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	POA1	P38218	177 aa		3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	LTP1	P40347	161 aa		3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	EGT2	P42835	1041 aa		3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	SCW4	P53334	386 aa	Known RBP	3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	PAU12	P53343	120 aa		3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	TPO3	Q06451	622 aa		3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	YCR050C	P25630	102 aa		3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	RRD1	P40454	393 aa	Known RBP	3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	GAS3	Q03655	524 aa		3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	ELP6	Q04868	273 aa		3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	MIR1	P23641	311 aa	Known RBP	3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	RPS26A	P39938	119 aa	Known RBP	3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	RPS26B	P39939	119 aa	Known RBP	3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	YER076C	P40049	302 aa		3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	YIL102C	P40488	101 aa		3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	XBP1	P40489	647 aa		3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	SCS3	P53012	380 aa		3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	YIP5	P53108	310 aa		3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	YML083C	Q04526	418 aa		3.98	□□□□□ -1.77
YDR261C-D	YDR261C-D	YLR415C	O13578	112 aa		3.97	□□□□□ -1.77
YDR261C-D	YDR261C-D	RPS14A	P06367	137 aa	Known RBP	3.97	□□□□□ -1.77
YDR261C-D	YDR261C-D	YEL076C-A	P0CX16	216 aa		3.97	□□□□□ -1.77
YDR261C-D	YDR261C-D	YLR464W	P0CX17	216 aa		3.97	□□□□□ -1.77
YDR261C-D	YDR261C-D	YMC1	P32331	307 aa		3.97	□□□□□ -1.77
YDR261C-D	YDR261C-D	EMP24	P32803	203 aa	Known RBP	3.97	□□□□□ -1.77
YDR261C-D	YDR261C-D	ZRT3	P34240	503 aa		3.97	□□□□□ -1.77
YDR261C-D	YDR261C-D	PRY1	P47032	299 aa		3.97	□□□□□ -1.77
YDR261C-D	YDR261C-D	VPS55	P47111	140 aa		3.97	□□□□□ -1.77
YDR261C-D	YDR261C-D	NSG2	P53898	299 aa		3.97	□□□□□ -1.77
YDR261C-D	YDR261C-D	YBR182C-A	Q8TGU6	64 aa		3.97	□□□□□ -1.77
YDR261C-D	YDR261C-D	TES1	P41903	349 aa	Known RBP	3.97	□□□□□ -1.77
YDR261C-D	YDR261C-D	CYC1	P00044	109 aa	Predicted RBP	3.97	□□□□□ -1.77
YDR261C-D	YDR261C-D	YFL068W	P0CX99	160 aa		3.97	□□□□□ -1.77
YDR261C-D	YDR261C-D	YLL066W-A	P0CY00	160 aa		3.97	□□□□□ -1.77
YDR261C-D	YDR261C-D	YLL067W-A	P0CY01	160 aa		3.97	□□□□□ -1.77
YDR261C-D	YDR261C-D	HMRA2	P0CY13	119 aa		3.97	□□□□□ -1.77
YDR261C-D	YDR261C-D	GLN3	P18494	730 aa		3.97	□□□□□ -1.77
YDR261C-D	YDR261C-D	IES6	P32617	166 aa		3.97	□□□□□ -1.77
YDR261C-D	YDR261C-D	TOM6	P33448	61 aa		3.97	□□□□□ -1.77
YDR261C-D	YDR261C-D	YHR177W	P38867	453 aa		3.97	□□□□□ -1.77
YDR261C-D	YDR261C-D	PEX17	P40155	199 aa		3.97	□□□□□ -1.77
YDR261C-D	YDR261C-D	BPT1	P14772	1559 aa		3.97	□□□□□ -1.77
YDR261C-D	YDR261C-D	YEL028W	P39989	153 aa		3.97	□□□□□ -1.77
YDR261C-D	YDR261C-D	CDC1	P40986	491 aa		3.97	□□□□□ -1.77
YDR261C-D	YDR261C-D	TIM18	Q08749	192 aa		3.97	□□□□□ -1.77
YDR261C-D	YDR261C-D	DDR48	P18899	430 aa	Known RBP	3.96	□□□□□ -1.77
YDR261C-D	YDR261C-D	PEX4	P29340	183 aa		3.96	□□□□□ -1.77
YDR261C-D	YDR261C-D	UTR5	P32630	166 aa		3.96	□□□□□ -1.77
YDR261C-D	YDR261C-D	YSY6	P38374	65 aa		3.96	□□□□□ -1.77
YDR261C-D	YDR261C-D	MBB1	P39534	108 aa		3.96	□□□□□ -1.77
YDR261C-D	YDR261C-D	RLM1	Q12224	676 aa		3.96	□□□□□ -1.77
YDR261C-D	YDR261C-D	FPR2	P32472	135 aa		3.96	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 49.5 ms