RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSN9, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSN9YDR179C YMR141CP40211 102 aa-0.29□□□□□ -2.46
CSN9YDR179C NSE4P43124 402 aa-0.29□□□□□ -2.46
CSN9YDR179C DML1Q03652 475 aa-0.29□□□□□ -2.46
CSN9YDR179C DAS2Q12084 232 aa-0.29□□□□□ -2.46
CSN9YDR179C FCY1Q12178 158 aa-0.29□□□□□ -2.46
CSN9YDR179C HFA1P32874 2273 aa-0.3□□□□□ -2.46
CSN9YDR179C KIN28P06242 306 aa-0.3□□□□□ -2.46
CSN9YDR179C TAF14P35189 244 aa-0.3□□□□□ -2.46
CSN9YDR179C RTC3P38804 111 aaPredicted RBP-0.3□□□□□ -2.46
CSN9YDR179C GPI14P47088 403 aaKnown RBP-0.3□□□□□ -2.46
CSN9YDR179C NAT3Q06504 195 aa-0.3□□□□□ -2.46
CSN9YDR179C ASF2P32448 525 aaPredicted RBP-0.31□□□□□ -2.46
CSN9YDR179C SPS18P32572 300 aa-0.31□□□□□ -2.46
CSN9YDR179C CLG1P35190 452 aa-0.31□□□□□ -2.46
CSN9YDR179C YRA2P36036 203 aaKnown RBP RIP-Chip data-0.31□□□□□ -2.46not detected
CSN9YDR179C ERG28P40030 148 aa-0.31□□□□□ -2.46
CSN9YDR179C NSA2P40078 261 aaKnown RBP-0.31□□□□□ -2.46
CSN9YDR179C POG1P40473 351 aa-0.31□□□□□ -2.46
CSN9YDR179C ATG41Q12048 136 aa-0.31□□□□□ -2.46
CSN9YDR179C RPS22AP0C0W1 130 aaKnown RBP-0.32□□□□□ -2.46
CSN9YDR179C YLR157W-EP0CF00 54 aa-0.32□□□□□ -2.46
CSN9YDR179C NHP6BP11633 99 aaKnown RBP-0.32□□□□□ -2.46
CSN9YDR179C STE18P18852 110 aa-0.32□□□□□ -2.46
CSN9YDR179C RFC4P40339 323 aaKnown RBP-0.32□□□□□ -2.46
CSN9YDR179C APS3P47064 194 aa-0.32□□□□□ -2.46
CSN9YDR179C RPS22BQ3E7Y3 130 aaKnown RBP-0.32□□□□□ -2.46
CSN9YDR179C GCY1P14065 312 aaKnown RBP RIP-Chip data-0.33□□□□□ -2.46not detected
CSN9YDR179C YNL194CP40169 301 aa-0.33□□□□□ -2.46
CSN9YDR179C YFL019CP43576 117 aa-0.33□□□□□ -2.46
CSN9YDR179C NRK1P53915 240 aa-0.33□□□□□ -2.46
CSN9YDR179C MGR2Q02889 113 aa-0.33□□□□□ -2.46
CSN9YDR179C SEN15Q04675 128 aa-0.33□□□□□ -2.46
CSN9YDR179C YOR342CQ12182 319 aa-0.33□□□□□ -2.46
CSN9YDR179C YLR412C-AQ3E742 68 aa-0.33□□□□□ -2.46
CSN9YDR179C ROM2P51862 1356 aaKnown RBP-0.33□□□□□ -2.46
CSN9YDR179C RRT1P38192 103 aa-0.34□□□□□ -2.46
CSN9YDR179C IKI1P38874 309 aa-0.34□□□□□ -2.46
CSN9YDR179C RFC2P40348 353 aa-0.34□□□□□ -2.46
CSN9YDR179C MOB1P40484 314 aa-0.34□□□□□ -2.46
CSN9YDR179C GPI17Q04080 534 aa-0.34□□□□□ -2.46
CSN9YDR179C ATP20Q12233 115 aa-0.34□□□□□ -2.46
CSN9YDR179C YDR157WA0A023PZE8 133 aa-0.35□□□□□ -2.47
CSN9YDR179C NSG1P38837 291 aa-0.35□□□□□ -2.47
CSN9YDR179C RTR1P40084 226 aaPredicted RBP-0.35□□□□□ -2.47
CSN9YDR179C RAD17P48581 401 aa-0.35□□□□□ -2.47
CSN9YDR179C YNL122CP53921 115 aaPredicted RBP-0.35□□□□□ -2.47
CSN9YDR179C VAM10Q08474 114 aa-0.35□□□□□ -2.47
CSN9YDR179C HAP2P06774 265 aa-0.36□□□□□ -2.47
CSN9YDR179C MRS1P07266 363 aa-0.36□□□□□ -2.47
CSN9YDR179C CBT1P36038 271 aaPredicted RBP-0.36□□□□□ -2.47
CSN9YDR179C OTU1P43558 301 aa-0.36□□□□□ -2.47
CSN9YDR179C COQ1P18900 473 aa-0.37□□□□□ -2.47
CSN9YDR179C FMP23P38231 175 aa-0.37□□□□□ -2.47
CSN9YDR179C CCC1P47818 322 aa-0.37□□□□□ -2.47
CSN9YDR179C CWC23P52868 283 aaPredicted RBP-0.37□□□□□ -2.47
CSN9YDR179C RUD3Q12234 484 aaKnown RBP-0.37□□□□□ -2.47
CSN9YDR179C HSP30P25619 332 aa-0.38□□□□□ -2.47
CSN9YDR179C HTD2P38790 280 aaKnown RBP-0.38□□□□□ -2.47
CSN9YDR179C RPS29BP41058 56 aaKnown RBP-0.38□□□□□ -2.47
CSN9YDR179C SBH1P52870 82 aa-0.38□□□□□ -2.47
CSN9YDR179C YDL157CQ12082 118 aa-0.38□□□□□ -2.47
CSN9YDR179C YOR381W-AQ3E804 55 aa-0.38□□□□□ -2.47
CSN9YDR179C YPR014CQ6B0W2 109 aa-0.38□□□□□ -2.47
CSN9YDR179C YHR140WP38842 239 aa-0.39□□□□□ -2.47
CSN9YDR179C YML079WQ03629 201 aa-0.39□□□□□ -2.47
CSN9YDR179C AVO2Q04749 426 aa-0.39□□□□□ -2.47
CSN9YDR179C HRD1Q08109 551 aa-0.39□□□□□ -2.47
CSN9YDR179C INO80P53115 1489 aa-0.4□□□□□ -2.47
CSN9YDR179C CDC33P07260 213 aaKnown RBP-0.4□□□□□ -2.47
CSN9YDR179C YBR027CP38220 110 aa-0.4□□□□□ -2.47
CSN9YDR179C YNL184CP53876 108 aa-0.4□□□□□ -2.47
CSN9YDR179C DUR1,2P32528 1835 aaKnown RBP-0.41□□□□□ -2.47
CSN9YDR179C RPS25BP0C0T4 108 aaKnown RBP-0.41□□□□□ -2.48
CSN9YDR179C RFA3P26755 122 aaKnown RBP-0.41□□□□□ -2.48
CSN9YDR179C ADE1P27616 306 aa-0.41□□□□□ -2.48
CSN9YDR179C GEP7P53171 287 aa-0.41□□□□□ -2.48
CSN9YDR179C RIM9Q04734 239 aa-0.41□□□□□ -2.48
CSN9YDR179C RPS25AQ3E792 108 aaPredicted RBP-0.41□□□□□ -2.48
CSN9YDR179C YGR269WP40326 108 aa-0.42□□□□□ -2.48
CSN9YDR179C PAC10P48363 199 aa-0.42□□□□□ -2.48
CSN9YDR179C PGA1P53896 198 aa-0.42□□□□□ -2.48
CSN9YDR179C VPS28Q02767 242 aa-0.42□□□□□ -2.48
CSN9YDR179C GAL83Q04739 417 aa-0.42□□□□□ -2.48
CSN9YDR179C TAF2P23255 1407 aa-0.43□□□□□ -2.48
CSN9YDR179C UBC6P33296 250 aaPredicted RBP-0.43□□□□□ -2.48
CSN9YDR179C GLC8P41818 229 aa-0.43□□□□□ -2.48
CSN9YDR179C MMS2P53152 137 aa-0.43□□□□□ -2.48
CSN9YDR179C YDL085C-AQ3E7B7 68 aaKnown RBP-0.43□□□□□ -2.48
CSN9YDR179C IGO2Q9P305 131 aa-0.43□□□□□ -2.48
CSN9YDR179C SLM6P38343 150 aa-0.44□□□□□ -2.48
CSN9YDR179C RTC4P53850 401 aa-0.44□□□□□ -2.48
CSN9YDR179C HTB1P02293 131 aaKnown RBP-0.45□□□□□ -2.48
CSN9YDR179C HTB2P02294 131 aa-0.45□□□□□ -2.48
CSN9YDR179C MSS2P40990 351 aa-0.45□□□□□ -2.48
CSN9YDR179C YMR321CQ04898 105 aa-0.45□□□□□ -2.48
CSN9YDR179C YOR034C-AQ3E735 80 aa-0.45□□□□□ -2.48
CSN9YDR179C SPS2P08459 502 aa-0.46□□□□□ -2.48
CSN9YDR179C SEC14P24280 304 aaKnown RBP-0.46□□□□□ -2.48
CSN9YDR179C SOL1P50278 321 aa-0.46□□□□□ -2.48
CSN9YDR179C NQM1P53228 333 aaPredicted RBP-0.46□□□□□ -2.48
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms