RNA–Protein interactions for RNA: YDR121W

DPB4, Transcript of Subunit of DNA pol epsilon and of ISW2 chromatin accessibility complex, yeastyeast

Gene DPB4, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB4YDR121W MRPS17Q03246 237 aaPredicted RBP3.23□□□□□ -1.89
DPB4YDR121W RRP17Q04031 235 aaPredicted RBP3.23□□□□□ -1.89
DPB4YDR121W FIT1Q04433 528 aa3.23□□□□□ -1.89
DPB4YDR121W HOR7Q05827 59 aa3.23□□□□□ -1.89
DPB4YDR121W JID1Q12350 301 aa3.23□□□□□ -1.89
DPB4YDR121W TFC7Q12415 435 aa3.23□□□□□ -1.89
DPB4YDR121W NHP6BP11633 99 aaKnown RBP3.22□□□□□ -1.89
DPB4YDR121W POF1P25576 258 aa3.22□□□□□ -1.89
DPB4YDR121W PAU2P32612 120 aa3.22□□□□□ -1.89
DPB4YDR121W YBL010CP32788 280 aa3.22□□□□□ -1.89
DPB4YDR121W YBR285WP38354 144 aa3.22□□□□□ -1.89
DPB4YDR121W EGD2P38879 174 aaKnown RBP3.22□□□□□ -1.89
DPB4YDR121W RSM27P53305 110 aa3.22□□□□□ -1.89
DPB4YDR121W BUD25P85052 153 aa3.22□□□□□ -1.89
DPB4YDR121W NOC4Q06512 552 aaPredicted RBP3.22□□□□□ -1.89
DPB4YDR121W MCH1Q07376 486 aa3.22□□□□□ -1.89
DPB4YDR121W UTP23Q12339 254 aaKnown RBP3.22□□□□□ -1.89
DPB4YDR121W PRE7P23724 241 aaKnown RBP3.21□□□□□ -1.9
DPB4YDR121W CPR4P25334 318 aa3.21□□□□□ -1.9
DPB4YDR121W YCR101CP25607 182 aa3.21□□□□□ -1.9
DPB4YDR121W BUD23P25627 275 aaPredicted RBP3.21□□□□□ -1.9
DPB4YDR121W PDC2P32896 925 aa3.21□□□□□ -1.9
DPB4YDR121W SFK1P35735 353 aa3.21□□□□□ -1.9
DPB4YDR121W AIM29P36154 155 aa3.21□□□□□ -1.9
DPB4YDR121W YJL213WP40896 331 aa3.21□□□□□ -1.9
DPB4YDR121W HAC1P41546 238 aa3.21□□□□□ -1.9
DPB4YDR121W TAD2P47058 250 aa3.21□□□□□ -1.9
DPB4YDR121W YJR085CP47131 105 aaKnown RBP3.21□□□□□ -1.9
DPB4YDR121W NEJ1Q06148 342 aa3.21□□□□□ -1.9
DPB4YDR121W ATG17Q06410 417 aa3.21□□□□□ -1.9
DPB4YDR121W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
DPB4YDR121W YLR099W-AQ3E798 87 aa3.21□□□□□ -1.9
DPB4YDR121W RPS18AP0CX55 146 aaKnown RBP3.2□□□□□ -1.9
DPB4YDR121W RPS18BP0CX56 146 aaPredicted RBP3.2□□□□□ -1.9
DPB4YDR121W FUS3P16892 353 aaKnown RBP3.2□□□□□ -1.9
DPB4YDR121W MRS4P23500 304 aa3.2□□□□□ -1.9
DPB4YDR121W OCH1P31755 480 aa3.2□□□□□ -1.9
DPB4YDR121W SPS18P32572 300 aa3.2□□□□□ -1.9
DPB4YDR121W MIC12P38341 106 aa3.2□□□□□ -1.9
DPB4YDR121W NVJ1P38881 321 aa3.2□□□□□ -1.9
DPB4YDR121W PEX22P39718 180 aa3.2□□□□□ -1.9
DPB4YDR121W AVT6P40074 448 aa3.2□□□□□ -1.9
DPB4YDR121W GNA1P43577 159 aaPredicted RBP3.2□□□□□ -1.9
DPB4YDR121W DOC1P53068 250 aa3.2□□□□□ -1.9
DPB4YDR121W VHT1P53241 593 aa3.2□□□□□ -1.9
DPB4YDR121W MSO1P53604 210 aaKnown RBP3.2□□□□□ -1.9
DPB4YDR121W ACT1P60010 375 aaKnown RBP3.2□□□□□ -1.9
DPB4YDR121W TIR4Q12218 487 aaPredicted RBP3.2□□□□□ -1.9
DPB4YDR121W TRM10Q12400 293 aa3.2□□□□□ -1.9
DPB4YDR121W YOS1Q3E834 85 aa3.2□□□□□ -1.9
DPB4YDR121W STF2P16965 84 aa3.19□□□□□ -1.9
DPB4YDR121W ZRC1P20107 442 aa3.19□□□□□ -1.9
DPB4YDR121W MIR1P23641 311 aaKnown RBP3.19□□□□□ -1.9
DPB4YDR121W RPL24BP24000 155 aaKnown RBP3.19□□□□□ -1.9
DPB4YDR121W UTR5P32630 166 aa3.19□□□□□ -1.9
DPB4YDR121W SPT4P32914 102 aaPredicted RBP3.19□□□□□ -1.9
DPB4YDR121W KTI12P34253 313 aaKnown RBP3.19□□□□□ -1.9
DPB4YDR121W GPI14P47088 403 aaKnown RBP3.19□□□□□ -1.9
DPB4YDR121W BXI1P48558 297 aa3.19□□□□□ -1.9
DPB4YDR121W TOS8P53147 276 aa3.19□□□□□ -1.9
DPB4YDR121W YHP1Q04116 353 aa3.19□□□□□ -1.9
DPB4YDR121W GRH1Q04410 372 aaKnown RBP3.19□□□□□ -1.9
DPB4YDR121W CTR3Q06686 241 aa3.19□□□□□ -1.9
DPB4YDR121W YPD1Q07688 167 aa3.19□□□□□ -1.9
DPB4YDR121W YEL009C-AA0A023PZF2 135 aa3.18□□□□□ -1.9
DPB4YDR121W AHC2P25649 128 aa3.18□□□□□ -1.9
DPB4YDR121W ARO7P32178 256 aa3.18□□□□□ -1.9
DPB4YDR121W RPB7P34087 171 aa3.18□□□□□ -1.9
DPB4YDR121W YKR045CP36138 183 aa3.18□□□□□ -1.9
DPB4YDR121W UTP30P36144 274 aaKnown RBP3.18□□□□□ -1.9
DPB4YDR121W RTC3P38804 111 aaPredicted RBP3.18□□□□□ -1.9
DPB4YDR121W IKI1P38874 309 aa3.18□□□□□ -1.9
DPB4YDR121W PET8P38921 284 aa3.18□□□□□ -1.9
DPB4YDR121W DIE2P50076 525 aa3.18□□□□□ -1.9
DPB4YDR121W RPL9BP51401 191 aaKnown RBP3.18□□□□□ -1.9
DPB4YDR121W CWC25P53854 179 aaKnown RBP3.18□□□□□ -1.9
DPB4YDR121W CTF19Q02732 369 aa3.18□□□□□ -1.9
DPB4YDR121W MAK3Q03503 176 aa3.18□□□□□ -1.9
DPB4YDR121W SCW10Q04951 389 aa3.18□□□□□ -1.9
DPB4YDR121W PRM3Q08931 133 aa3.18□□□□□ -1.9
DPB4YDR121W ATP16Q12165 160 aa3.18□□□□□ -1.9
DPB4YDR121W DGK1Q12382 290 aa3.18□□□□□ -1.9
DPB4YDR121W YCL021W-AQ96VH3 125 aa3.18□□□□□ -1.9
DPB4YDR121W MED11Q99278 115 aa3.18□□□□□ -1.9
DPB4YDR121W RNA15P25299 296 aaPredicted RBP3.17□□□□□ -1.9
DPB4YDR121W RFA3P26755 122 aaKnown RBP3.17□□□□□ -1.9
DPB4YDR121W YKL075CP36083 450 aa3.17□□□□□ -1.9
DPB4YDR121W SDH4P37298 181 aa3.17□□□□□ -1.9
DPB4YDR121W SOL1P50278 321 aa3.17□□□□□ -1.9
DPB4YDR121W FMP48P53233 369 aa3.17□□□□□ -1.9
DPB4YDR121W LPP1Q04396 274 aa3.17□□□□□ -1.9
DPB4YDR121W FSH2Q05015 223 aa3.17□□□□□ -1.9
DPB4YDR121W DPP1Q05521 289 aa3.17□□□□□ -1.9
DPB4YDR121W QCR7P00128 127 aa3.16□□□□□ -1.9
DPB4YDR121W MRPL20P22354 195 aaPredicted RBP3.16□□□□□ -1.9
DPB4YDR121W SHE2P36068 246 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
DPB4YDR121W YJR012CP47087 207 aa3.16□□□□□ -1.9
DPB4YDR121W YAE1P47118 141 aaPredicted RBP3.16□□□□□ -1.9
DPB4YDR121W VMA10P48836 114 aaKnown RBP3.16□□□□□ -1.9
DPB4YDR121W CAB4P53332 305 aa3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms