RNA–Protein interactions for RNA: YDR113C

PDS1, Transcript of Securin, yeast

Gene PDS1, Length 1,122 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDS1	YDR113C	LSM3	P57743	89 aa	Known RBP	2.68	□□□□□ -1.98
PDS1	YDR113C	FCF1	Q05498	189 aa	Predicted RBP	2.68	□□□□□ -1.98
PDS1	YDR113C	IES3	Q12345	250 aa		2.68	□□□□□ -1.98
PDS1	YDR113C	RPS19A	P07280	144 aa	Known RBP	2.67	□□□□□ -1.98
PDS1	YDR113C	RPS19B	P07281	144 aa	Predicted RBP	2.67	□□□□□ -1.98
PDS1	YDR113C	RPL2A	P0CX45	254 aa	Known RBP	2.67	□□□□□ -1.98
PDS1	YDR113C	RPL2B	P0CX46	254 aa	Known RBP	2.67	□□□□□ -1.98
PDS1	YDR113C	SFK1	P35735	353 aa		2.67	□□□□□ -1.98
PDS1	YDR113C	YHR125W	P38831	101 aa		2.67	□□□□□ -1.98
PDS1	YDR113C	AIM2	P39721	246 aa		2.67	□□□□□ -1.98
PDS1	YDR113C	YEA4	P40004	342 aa		2.67	□□□□□ -1.98
PDS1	YDR113C	APQ12	P40532	138 aa		2.67	□□□□□ -1.98
PDS1	YDR113C	OST2	P46964	130 aa		2.67	□□□□□ -1.98
PDS1	YDR113C	GPI14	P47088	403 aa	Known RBP	2.67	□□□□□ -1.98
PDS1	YDR113C	CSN9	Q03981	162 aa		2.67	□□□□□ -1.98
PDS1	YDR113C	YDL180W	Q12301	547 aa		2.67	□□□□□ -1.98
PDS1	YDR113C	Q0255	P03881	472 aa		2.66	□□□□□ -1.98
PDS1	YDR113C	RPL9A	P05738	191 aa	Known RBP	2.66	□□□□□ -1.98
PDS1	YDR113C	RAD10	P06838	210 aa		2.66	□□□□□ -1.98
PDS1	YDR113C	ATP15	P21306	62 aa		2.66	□□□□□ -1.98
PDS1	YDR113C	OCH1	P31755	480 aa		2.66	□□□□□ -1.98
PDS1	YDR113C	AVT2	P39981	480 aa		2.66	□□□□□ -1.98
PDS1	YDR113C	TIF34	P40217	347 aa	Known RBP	2.66	□□□□□ -1.98
PDS1	YDR113C	ARC15	P40518	154 aa	RIP-Chip data	2.66	□□□□□ -1.98	not detected
PDS1	YDR113C	CIN5	P40917	295 aa		2.66	□□□□□ -1.98
PDS1	YDR113C	SER2	P42941	309 aa		2.66	□□□□□ -1.98
PDS1	YDR113C	YFR045W	P43617	309 aa		2.66	□□□□□ -1.98
PDS1	YDR113C	SNX4	P47057	423 aa		2.66	□□□□□ -1.98
PDS1	YDR113C	YJR015W	P47090	510 aa		2.66	□□□□□ -1.98
PDS1	YDR113C	RPL9B	P51401	191 aa	Known RBP	2.66	□□□□□ -1.98
PDS1	YDR113C	ORM1	P53224	222 aa		2.66	□□□□□ -1.98
PDS1	YDR113C	THI74	Q04083	370 aa		2.66	□□□□□ -1.98
PDS1	YDR113C	SPC24	Q04477	213 aa		2.66	□□□□□ -1.98
PDS1	YDR113C	RFU1	Q08003	200 aa		2.66	□□□□□ -1.98
PDS1	YDR113C	AKR2	Q12013	749 aa		2.66	□□□□□ -1.98
PDS1	YDR113C	DAS2	Q12084	232 aa		2.66	□□□□□ -1.98
PDS1	YDR113C	YOR342C	Q12182	319 aa		2.66	□□□□□ -1.98
PDS1	YDR113C	DGK1	Q12382	290 aa		2.66	□□□□□ -1.98
PDS1	YDR113C	YLR361C-A	Q3E795	98 aa		2.66	□□□□□ -1.98
PDS1	YDR113C	URB1	P34241	1764 aa	Known RBP	2.66	□□□□□ -1.98
PDS1	YDR113C	TKL2	P33315	681 aa		2.65	□□□□□ -1.99
PDS1	YDR113C	CSH1	P38287	376 aa		2.65	□□□□□ -1.99
PDS1	YDR113C	XPT1	P47165	209 aa		2.65	□□□□□ -1.99
PDS1	YDR113C	TTI2	P47168	421 aa		2.65	□□□□□ -1.99
PDS1	YDR113C	VMA10	P48836	114 aa	Known RBP	2.65	□□□□□ -1.99
PDS1	YDR113C	HHT1	P61830	136 aa		2.65	□□□□□ -1.99
PDS1	YDR113C	DYN2	Q02647	92 aa		2.65	□□□□□ -1.99
PDS1	YDR113C	YMR320W	Q04897	101 aa		2.65	□□□□□ -1.99
PDS1	YDR113C	CDC8	P00572	216 aa		2.64	□□□□□ -1.99
PDS1	YDR113C	NHP6A	P11632	93 aa	Known RBP	2.64	□□□□□ -1.99
PDS1	YDR113C	CCA1	P21269	546 aa		2.64	□□□□□ -1.99
PDS1	YDR113C	STP22	P25604	385 aa		2.64	□□□□□ -1.99
PDS1	YDR113C	OPY1	P38271	328 aa		2.64	□□□□□ -1.99
PDS1	YDR113C	NSG1	P38837	291 aa		2.64	□□□□□ -1.99
PDS1	YDR113C	DLS1	P40366	167 aa		2.64	□□□□□ -1.99
PDS1	YDR113C	PHB1	P40961	287 aa		2.64	□□□□□ -1.99
PDS1	YDR113C	YOL014W	Q08110	124 aa		2.64	□□□□□ -1.99
PDS1	YDR113C	PST2	Q12335	198 aa	Known RBP	2.64	□□□□□ -1.99
PDS1	YDR113C	YML100W-A	Q8TGT0	57 aa		2.64	□□□□□ -1.99
PDS1	YDR113C	RIB3	Q99258	208 aa		2.64	□□□□□ -1.99
PDS1	YDR113C	TIM9	O74700	87 aa		2.63	□□□□□ -1.99
PDS1	YDR113C	RPL30	P14120	105 aa	Known RBP	2.63	□□□□□ -1.99
PDS1	YDR113C	SUA7	P29055	345 aa	Predicted RBP	2.63	□□□□□ -1.99
PDS1	YDR113C	VMA11	P32842	164 aa		2.63	□□□□□ -1.99
PDS1	YDR113C	YBR285W	P38354	144 aa		2.63	□□□□□ -1.99
PDS1	YDR113C	CTR2	P38865	189 aa		2.63	□□□□□ -1.99
PDS1	YDR113C	YER188W	P40103	239 aa		2.63	□□□□□ -1.99
PDS1	YDR113C	YFL019C	P43576	117 aa		2.63	□□□□□ -1.99
PDS1	YDR113C	YFL012W	P43580	148 aa		2.63	□□□□□ -1.99
PDS1	YDR113C	ECO1	P43605	281 aa		2.63	□□□□□ -1.99
PDS1	YDR113C	BUD13	P46947	266 aa	Predicted RBP	2.63	□□□□□ -1.99
PDS1	YDR113C	GON7	P46984	123 aa		2.63	□□□□□ -1.99
PDS1	YDR113C	RCF2	P53721	224 aa		2.63	□□□□□ -1.99
PDS1	YDR113C	UBC7	Q02159	165 aa		2.63	□□□□□ -1.99
PDS1	YDR113C	YLR412C-A	Q3E742	68 aa		2.63	□□□□□ -1.99
PDS1	YDR113C	HIS3	P06633	220 aa		2.62	□□□□□ -1.99
PDS1	YDR113C	MRPL17	P36528	281 aa		2.62	□□□□□ -1.99
PDS1	YDR113C	PRS3	P38689	320 aa	Known RBP	2.62	□□□□□ -1.99
PDS1	YDR113C	DSK2	P48510	373 aa		2.62	□□□□□ -1.99
PDS1	YDR113C	YGR026W	P53217	278 aa		2.62	□□□□□ -1.99
PDS1	YDR113C	NAT3	Q06504	195 aa		2.62	□□□□□ -1.99
PDS1	YDR113C	HRD1	Q08109	551 aa		2.62	□□□□□ -1.99
PDS1	YDR113C	YOR268C	Q08734	132 aa		2.62	□□□□□ -1.99
PDS1	YDR113C	SAS5	Q99314	248 aa		2.62	□□□□□ -1.99
PDS1	YDR113C	RAD50	P12753	1312 aa		2.62	□□□□□ -1.99
PDS1	YDR113C	YHR032W-A	P0C5N6	59 aa		2.61	□□□□□ -1.99
PDS1	YDR113C	FCY21	P40039	528 aa		2.61	□□□□□ -1.99
PDS1	YDR113C	YER134C	P40081	178 aa		2.61	□□□□□ -1.99
PDS1	YDR113C	YPL073C	P40323	161 aa		2.61	□□□□□ -1.99
PDS1	YDR113C	SMD3	P43321	101 aa	Known RBP	2.61	□□□□□ -1.99
PDS1	YDR113C	CCC1	P47818	322 aa		2.61	□□□□□ -1.99
PDS1	YDR113C	AIF1	P52923	378 aa		2.61	□□□□□ -1.99
PDS1	YDR113C	NUP192	P47054	1683 aa		2.6	□□□□□ -1.99
PDS1	YDR113C	TOM1	Q03280	3268 aa		2.6	□□□□□ -1.99
PDS1	YDR113C	FKS3	Q04952	1785 aa		2.6	□□□□□ -1.99
PDS1	YDR113C	CPA1	P07258	411 aa	Known RBP	2.6	□□□□□ -1.99
PDS1	YDR113C	SCL1	P21243	252 aa	Known RBP	2.6	□□□□□ -1.99
PDS1	YDR113C	PAN3	P36102	679 aa	Predicted RBP	2.6	□□□□□ -1.99
PDS1	YDR113C	VTC1	P40046	129 aa	RIP-Chip data	2.6	□□□□□ -1.99	not detected
PDS1	YDR113C	YFR054C	P43622	192 aa		2.6	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms