RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A YCR025CP25352 136 aa-0.34□□□□□ -2.46
TFB5YDR079C-A KRR1P25586 316 aaPredicted RBP-0.34□□□□□ -2.46
TFB5YDR079C-A HSP30P25619 332 aa-0.34□□□□□ -2.46
TFB5YDR079C-A ERG2P32352 222 aa-0.34□□□□□ -2.46
TFB5YDR079C-A TIP20P33891 701 aa-0.34□□□□□ -2.46
TFB5YDR079C-A UTP11P34247 250 aaPredicted RBP-0.34□□□□□ -2.46
TFB5YDR079C-A BMH2P34730 273 aaKnown RBP-0.34□□□□□ -2.46
TFB5YDR079C-A YET1P35723 206 aa-0.34□□□□□ -2.46
TFB5YDR079C-A YKR015CP36111 568 aa-0.34□□□□□ -2.46
TFB5YDR079C-A MRPL17P36528 281 aa-0.34□□□□□ -2.46
TFB5YDR079C-A LDB7P38210 180 aa-0.34□□□□□ -2.46
TFB5YDR079C-A SLM4P38247 162 aa-0.34□□□□□ -2.46
TFB5YDR079C-A SPI1P40092 148 aa-0.34□□□□□ -2.46
TFB5YDR079C-A CCS1P40202 249 aaKnown RBP-0.34□□□□□ -2.46
TFB5YDR079C-A RPC10P40422 70 aa-0.34□□□□□ -2.46
TFB5YDR079C-A YIL163CP40448 117 aa-0.34□□□□□ -2.46
TFB5YDR079C-A COA1P40452 197 aa-0.34□□□□□ -2.46
TFB5YDR079C-A POG1P40473 351 aa-0.34□□□□□ -2.46
TFB5YDR079C-A HYR1P40581 163 aaKnown RBP-0.34□□□□□ -2.46
TFB5YDR079C-A CWP2P43497 92 aa-0.34□□□□□ -2.46
TFB5YDR079C-A ARC1P46672 376 aaKnown RBP-0.34□□□□□ -2.46
TFB5YDR079C-A RPS12P48589 143 aaKnown RBP-0.34□□□□□ -2.46
TFB5YDR079C-A DIE2P50076 525 aa-0.34□□□□□ -2.46
TFB5YDR079C-A CWC23P52868 283 aaPredicted RBP-0.34□□□□□ -2.46
TFB5YDR079C-A ARO8P53090 500 aaKnown RBP-0.34□□□□□ -2.46
TFB5YDR079C-A MPC3P53311 146 aa-0.34□□□□□ -2.46
TFB5YDR079C-A CUS2P53830 285 aaPredicted RBP-0.34□□□□□ -2.46
TFB5YDR079C-A SWT21P53873 357 aaPredicted RBP-0.34□□□□□ -2.46
TFB5YDR079C-A YNL184CP53876 108 aa-0.34□□□□□ -2.46
TFB5YDR079C-A OCA2P53949 197 aa-0.34□□□□□ -2.46
TFB5YDR079C-A YNL010WP53981 241 aaKnown RBP-0.34□□□□□ -2.46
TFB5YDR079C-A RSM23Q01163 450 aa-0.34□□□□□ -2.46
TFB5YDR079C-A MGR2Q02889 113 aa-0.34□□□□□ -2.46
TFB5YDR079C-A COF1Q03048 143 aaKnown RBP-0.34□□□□□ -2.46
TFB5YDR079C-A AIM34Q03673 198 aa-0.34□□□□□ -2.46
TFB5YDR079C-A CSN9Q03981 162 aa-0.34□□□□□ -2.46
TFB5YDR079C-A THI74Q04083 370 aa-0.34□□□□□ -2.46
TFB5YDR079C-A YDR124WQ04608 324 aa-0.34□□□□□ -2.46
TFB5YDR079C-A YMR252CQ04814 134 aa-0.34□□□□□ -2.46
TFB5YDR079C-A NAT3Q06504 195 aa-0.34□□□□□ -2.46
TFB5YDR079C-A IWR1Q07532 353 aaPredicted RBP-0.34□□□□□ -2.46
TFB5YDR079C-A MIM1Q08176 113 aa-0.34□□□□□ -2.46
TFB5YDR079C-A RRT8Q08219 342 aa-0.34□□□□□ -2.46
TFB5YDR079C-A SLD7Q08457 257 aa-0.34□□□□□ -2.46
TFB5YDR079C-A SCP1Q08873 200 aa-0.34□□□□□ -2.46
TFB5YDR079C-A YDL157CQ12082 118 aa-0.34□□□□□ -2.46
TFB5YDR079C-A MDY2Q12285 212 aa-0.34□□□□□ -2.46
TFB5YDR079C-A ATP14Q12349 124 aa-0.34□□□□□ -2.46
TFB5YDR079C-A DCN1Q12395 269 aa-0.34□□□□□ -2.46
TFB5YDR079C-A MPD1Q12404 318 aaKnown RBP-0.34□□□□□ -2.46
TFB5YDR079C-A OCA6Q12454 224 aa-0.34□□□□□ -2.46
TFB5YDR079C-A YMR122W-AQ3E842 84 aa-0.34□□□□□ -2.46
TFB5YDR079C-A ODC2Q99297 307 aa-0.34□□□□□ -2.46
TFB5YDR079C-A TRP1P00912 224 aa-0.35□□□□□ -2.47
TFB5YDR079C-A ARG3P05150 338 aa-0.35□□□□□ -2.47
TFB5YDR079C-A RPL29P05747 59 aaPredicted RBP-0.35□□□□□ -2.47
TFB5YDR079C-A RAD1P06777 1100 aa-0.35□□□□□ -2.47
TFB5YDR079C-A RPC40P07703 335 aaKnown RBP-0.35□□□□□ -2.47
TFB5YDR079C-A SPO12P17123 173 aa-0.35□□□□□ -2.47
TFB5YDR079C-A STE18P18852 110 aa-0.35□□□□□ -2.47
TFB5YDR079C-A YMR31P19955 123 aa-0.35□□□□□ -2.47
TFB5YDR079C-A TRX3P25372 127 aa-0.35□□□□□ -2.47
TFB5YDR079C-A VMA5P31412 392 aaKnown RBP-0.35□□□□□ -2.47
TFB5YDR079C-A SPT14P32363 452 aa-0.35□□□□□ -2.47
TFB5YDR079C-A MUD1P32605 298 aaKnown RBP-0.35□□□□□ -2.47
TFB5YDR079C-A TIM12P32830 109 aa-0.35□□□□□ -2.47
TFB5YDR079C-A SPO23P33757 523 aa-0.35□□□□□ -2.47
TFB5YDR079C-A CSG2P35206 410 aa-0.35□□□□□ -2.47
TFB5YDR079C-A SDS22P36047 338 aa-0.35□□□□□ -2.47
TFB5YDR079C-A CMC1P36064 111 aa-0.35□□□□□ -2.47
TFB5YDR079C-A MRPL28P36527 147 aa-0.35□□□□□ -2.47
TFB5YDR079C-A YBR285WP38354 144 aa-0.35□□□□□ -2.47
TFB5YDR079C-A SMF2P38778 549 aa-0.35□□□□□ -2.47
TFB5YDR079C-A LSM12P38828 187 aaKnown RBP-0.35□□□□□ -2.47
TFB5YDR079C-A SUR2P38992 349 aa-0.35□□□□□ -2.47
TFB5YDR079C-A MNN9P39107 395 aaKnown RBP-0.35□□□□□ -2.47
TFB5YDR079C-A YAL064WP39711 94 aa-0.35□□□□□ -2.47
TFB5YDR079C-A VTC1P40046 129 aaRIP-Chip data-0.35□□□□□ -2.47not detected
TFB5YDR079C-A YNL217WP40152 326 aa-0.35□□□□□ -2.47
TFB5YDR079C-A PEP8P40335 379 aa-0.35□□□□□ -2.47
TFB5YDR079C-A MPM1P40364 252 aa-0.35□□□□□ -2.47
TFB5YDR079C-A YIL054WP40524 105 aa-0.35□□□□□ -2.47
TFB5YDR079C-A TFG2P41896 400 aaPredicted RBP-0.35□□□□□ -2.47
TFB5YDR079C-A YFR045WP43617 309 aa-0.35□□□□□ -2.47
TFB5YDR079C-A LOH1P47055 219 aa-0.35□□□□□ -2.47
TFB5YDR079C-A EDC1P53080 175 aaPredicted RBP-0.35□□□□□ -2.47
TFB5YDR079C-A HOP2P53187 214 aa-0.35□□□□□ -2.47
TFB5YDR079C-A ORM1P53224 222 aa-0.35□□□□□ -2.47
TFB5YDR079C-A NOP19P53317 196 aaPredicted RBP-0.35□□□□□ -2.47
TFB5YDR079C-A MPP6P53725 186 aaPredicted RBP-0.35□□□□□ -2.47
TFB5YDR079C-A YNR066CP53752 436 aa-0.35□□□□□ -2.47
TFB5YDR079C-A PGA2P53903 129 aa-0.35□□□□□ -2.47
TFB5YDR079C-A YNL019CP53975 284 aa-0.35□□□□□ -2.47
TFB5YDR079C-A HHT1P61830 136 aa-0.35□□□□□ -2.47
TFB5YDR079C-A DDR2P89113 61 aa-0.35□□□□□ -2.47
TFB5YDR079C-A MET14Q02196 202 aa-0.35□□□□□ -2.47
TFB5YDR079C-A OSH6Q02201 448 aa-0.35□□□□□ -2.47
TFB5YDR079C-A ODC1Q03028 310 aa-0.35□□□□□ -2.47
TFB5YDR079C-A YDR476CQ03362 224 aa-0.35□□□□□ -2.47
TFB5YDR079C-A SMD2Q06217 110 aaKnown RBP-0.35□□□□□ -2.47
Retrieved 100 of 5,963 RNA–protein pairs in 60.8 ms