RNA–Protein interactions for RNA: YDL108W

KIN28, Transcript of Serine/threonine protein kinase, subunit of transcription factor TFIIH, yeastyeast

Gene KIN28, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KIN28YDL108W YLR177WQ06251 628 aa3.76□□□□□ -1.81
KIN28YDL108W ATG10Q07879 167 aa3.76□□□□□ -1.81
KIN28YDL108W YLR042CQ07990 161 aa3.76□□□□□ -1.81
KIN28YDL108W RAD28Q12021 506 aa3.76□□□□□ -1.81
KIN28YDL108W TDA8Q6B2U8 126 aa3.76□□□□□ -1.81
KIN28YDL108W YHR213W-AQ8TGT4 77 aa3.76□□□□□ -1.81
KIN28YDL108W ATP5P09457 212 aa3.75□□□□□ -1.81
KIN28YDL108W RPB5P20434 215 aa3.75□□□□□ -1.81
KIN28YDL108W LDB16P25587 256 aa3.75□□□□□ -1.81
KIN28YDL108W SRB6P32570 121 aa3.75□□□□□ -1.81
KIN28YDL108W SFT2P38166 215 aa3.75□□□□□ -1.81
KIN28YDL108W YHR130CP38834 111 aa3.75□□□□□ -1.81
KIN28YDL108W AVT7P40501 490 aa3.75□□□□□ -1.81
KIN28YDL108W YIL012WP40551 113 aa3.75□□□□□ -1.81
KIN28YDL108W YGL088WP53151 121 aa3.75□□□□□ -1.81
KIN28YDL108W YGR050CP53231 118 aa3.75□□□□□ -1.81
KIN28YDL108W KEI1Q06346 221 aa3.75□□□□□ -1.81
KIN28YDL108W YOR292CQ08743 309 aa3.75□□□□□ -1.81
KIN28YDL108W YPL278CQ08990 100 aa3.75□□□□□ -1.81
KIN28YDL108W SLM3Q12093 417 aa3.75□□□□□ -1.81
KIN28YDL108W YPL245WQ12179 454 aaKnown RBP3.75□□□□□ -1.81
KIN28YDL108W YOR097CQ12274 175 aaPredicted RBP3.75□□□□□ -1.81
KIN28YDL108W YBL008W-AQ3E821 79 aa3.75□□□□□ -1.81
KIN28YDL108W SMC4Q12267 1418 aa3.75□□□□□ -1.81
KIN28YDL108W HEM4P06174 275 aa3.74□□□□□ -1.81
KIN28YDL108W PIS1P06197 220 aaKnown RBP3.74□□□□□ -1.81
KIN28YDL108W URA10P30402 227 aa3.74□□□□□ -1.81
KIN28YDL108W IPT1P38954 527 aa3.74□□□□□ -1.81
KIN28YDL108W GAA1P39012 614 aa3.74□□□□□ -1.81
KIN28YDL108W CAT8P39113 1433 aa3.74□□□□□ -1.81
KIN28YDL108W RPL13BP40212 199 aaKnown RBP3.74□□□□□ -1.81
KIN28YDL108W GEA1P47102 1408 aaPredicted RBP3.74□□□□□ -1.81
KIN28YDL108W SSK2P53599 1579 aa3.74□□□□□ -1.81
KIN28YDL108W FMP41P53889 259 aaKnown RBP3.74□□□□□ -1.81
KIN28YDL108W PIR3Q03180 325 aa3.74□□□□□ -1.81
KIN28YDL108W RCE1Q03530 315 aa3.74□□□□□ -1.81
KIN28YDL108W YDL211CQ12121 372 aa3.74□□□□□ -1.81
KIN28YDL108W RPL13AQ12690 199 aaPredicted RBP3.74□□□□□ -1.81
KIN28YDL108W COX14P39103 70 aa3.73□□□□□ -1.81
KIN28YDL108W YER181CP40097 107 aa3.73□□□□□ -1.81
KIN28YDL108W GAT4P40569 121 aa3.73□□□□□ -1.81
KIN28YDL108W EMC4P53073 190 aa3.73□□□□□ -1.81
KIN28YDL108W SWC7Q06707 132 aa3.73□□□□□ -1.81
KIN28YDL108W SLD7Q08457 257 aa3.73□□□□□ -1.81
KIN28YDL108W SNX3Q08826 162 aaKnown RBP3.73□□□□□ -1.81
KIN28YDL108W YPL264CQ08980 353 aa3.73□□□□□ -1.81
KIN28YDL108W YBR298C-AQ8TGK4 73 aa3.73□□□□□ -1.81
KIN28YDL108W PDR10P51533 1564 aa3.72□□□□□ -1.81
KIN28YDL108W RAD6P06104 172 aa3.72□□□□□ -1.81
KIN28YDL108W IMP1P28627 190 aa3.72□□□□□ -1.81
KIN28YDL108W AHT1P29589 182 aa3.72□□□□□ -1.81
KIN28YDL108W GPX1P36014 167 aa3.72□□□□□ -1.81
KIN28YDL108W RPL14AP36105 138 aaKnown RBP3.72□□□□□ -1.81
KIN28YDL108W SMP1P38128 452 aa3.72□□□□□ -1.81
KIN28YDL108W YBL081WP38180 368 aaKnown RBP3.72□□□□□ -1.81
KIN28YDL108W EDC2P40023 145 aaPredicted RBP3.72□□□□□ -1.81
KIN28YDL108W YJL218WP40892 196 aaKnown RBP3.72□□□□□ -1.81
KIN28YDL108W BAT2P47176 376 aaKnown RBP3.72□□□□□ -1.81
KIN28YDL108W SAY1P53324 424 aa3.72□□□□□ -1.81
KIN28YDL108W SWT21P53873 357 aaPredicted RBP3.72□□□□□ -1.81
KIN28YDL108W AAH1P53909 347 aa3.72□□□□□ -1.81
KIN28YDL108W FIT1Q04433 528 aa3.72□□□□□ -1.81
KIN28YDL108W YMR103CQ04436 120 aa3.72□□□□□ -1.81
KIN28YDL108W SHH3Q04487 196 aa3.72□□□□□ -1.81
KIN28YDL108W YPL162CQ12042 273 aa3.72□□□□□ -1.81
KIN28YDL108W YMR230W-AQ3E7B5 62 aa3.72□□□□□ -1.81
KIN28YDL108W YFR032C-BQ8TGU2 87 aa3.72□□□□□ -1.81
KIN28YDL108W BNI1P41832 1953 aa3.72□□□□□ -1.81
KIN28YDL108W TY1B-NL2Q99337 1749 aaKnown RBP3.71□□□□□ -1.82
KIN28YDL108W YHR139C-AO13536 103 aa3.71□□□□□ -1.82
KIN28YDL108W RPS8AP0CX39 200 aaKnown RBP3.71□□□□□ -1.82
KIN28YDL108W RPS8BP0CX40 200 aaKnown RBP3.71□□□□□ -1.82
KIN28YDL108W TOM40P23644 387 aaKnown RBP3.71□□□□□ -1.82
KIN28YDL108W GLC7P32598 312 aaKnown RBP3.71□□□□□ -1.82
KIN28YDL108W CSE2P33308 149 aa3.71□□□□□ -1.82
KIN28YDL108W TEM1P38987 245 aa3.71□□□□□ -1.82
KIN28YDL108W AVT6P40074 448 aa3.71□□□□□ -1.82
KIN28YDL108W GEP7P53171 287 aa3.71□□□□□ -1.82
KIN28YDL108W OSH6Q02201 448 aa3.71□□□□□ -1.82
KIN28YDL108W FCF1Q05498 189 aaPredicted RBP3.71□□□□□ -1.82
KIN28YDL108W YEL009C-AA0A023PZF2 135 aa3.7□□□□□ -1.82
KIN28YDL108W CPA1P07258 411 aaKnown RBP3.7□□□□□ -1.82
KIN28YDL108W RPS18AP0CX55 146 aaKnown RBP3.7□□□□□ -1.82
KIN28YDL108W RPS18BP0CX56 146 aaPredicted RBP3.7□□□□□ -1.82
KIN28YDL108W MRS4P23500 304 aa3.7□□□□□ -1.82
KIN28YDL108W YIL059CP40520 121 aa3.7□□□□□ -1.82
KIN28YDL108W PHS1P40857 217 aa3.7□□□□□ -1.82
KIN28YDL108W PFS2P42841 465 aaKnown RBP3.7□□□□□ -1.82
KIN28YDL108W YFR045WP43617 309 aa3.7□□□□□ -1.82
KIN28YDL108W YPL067CQ02754 198 aa3.7□□□□□ -1.82
KIN28YDL108W RSM10Q03201 203 aa3.7□□□□□ -1.82
KIN28YDL108W FEX1Q08913 375 aa3.7□□□□□ -1.82
KIN28YDL108W TY1B-DR5P0C2I2 1755 aa3.7□□□□□ -1.82
KIN28YDL108W TY1B-DR6P0C2I3 1755 aa3.7□□□□□ -1.82
KIN28YDL108W TY1B-LR2P0C2I5 1755 aa3.7□□□□□ -1.82
KIN28YDL108W TY1B-LR3P0C2I6 1755 aaKnown RBP3.7□□□□□ -1.82
KIN28YDL108W TY1B-PR1P0C2I9 1755 aaKnown RBP3.7□□□□□ -1.82
KIN28YDL108W TY1B-PR3P0C2J1 1755 aaKnown RBP3.7□□□□□ -1.82
KIN28YDL108W TY1B-JR1P47098 1755 aa3.7□□□□□ -1.82
KIN28YDL108W TY1B-ML2Q03434 1755 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 145 ms