RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 RCE1Q03530 315 aa7.34□□□□□ -1.23
LSR1LSR1 TMA10Q06177 86 aa7.34□□□□□ -1.23
LSR1LSR1 FRQ1Q06389 190 aa7.34□□□□□ -1.23
LSR1LSR1 HRD1Q08109 551 aa7.34□□□□□ -1.23
LSR1LSR1 FIT3Q08907 204 aa7.34□□□□□ -1.23
LSR1LSR1 POM33Q12164 279 aa7.34□□□□□ -1.23
LSR1LSR1 RPL7BQ12213 244 aaKnown RBP7.34□□□□□ -1.23
LSR1LSR1 FMP49A0A023PZB3 126 aa7.33□□□□□ -1.24
LSR1LSR1 TAF4P50105 388 aa7.33□□□□□ -1.24
LSR1LSR1 ARR2Q06597 130 aa7.33□□□□□ -1.24
LSR1LSR1 YFH1Q07540 174 aa7.33□□□□□ -1.24
LSR1LSR1 LAS17Q12446 633 aa7.33□□□□□ -1.24
LSR1LSR1 PAA1Q12447 191 aaKnown RBP7.33□□□□□ -1.24
LSR1LSR1 ROX3P25046 220 aa7.32□□□□□ -1.24
LSR1LSR1 GAT2P40209 560 aa7.32□□□□□ -1.24
LSR1LSR1 XPT1P47165 209 aa7.32□□□□□ -1.24
LSR1LSR1 LST7P53237 242 aa7.32□□□□□ -1.24
LSR1LSR1 YMR007WQ03675 126 aa7.32□□□□□ -1.24
LSR1LSR1 RAF1Q06891 181 aa7.32□□□□□ -1.24
LSR1LSR1 YPR071WQ12346 211 aa7.32□□□□□ -1.24
LSR1LSR1 FCY2P17064 533 aa7.31□□□□□ -1.24
LSR1LSR1 VMA16P23968 213 aa7.31□□□□□ -1.24
LSR1LSR1 REC104P33323 182 aa7.31□□□□□ -1.24
LSR1LSR1 PSD1P39006 500 aa7.31□□□□□ -1.24
LSR1LSR1 CYB5P40312 120 aa7.31□□□□□ -1.24
LSR1LSR1 GPI2P46961 280 aa7.31□□□□□ -1.24
LSR1LSR1 HSK3P69852 69 aa7.31□□□□□ -1.24
LSR1LSR1 ARR3Q06598 404 aa7.31□□□□□ -1.24
LSR1LSR1 POC4Q12245 148 aaPredicted RBP7.31□□□□□ -1.24
LSR1LSR1 RPS25BP0C0T4 108 aaKnown RBP7.3□□□□□ -1.24
LSR1LSR1 YOX1P34161 385 aa7.3□□□□□ -1.24
LSR1LSR1 QDR3P38227 689 aa7.3□□□□□ -1.24
LSR1LSR1 YMR262WP38430 313 aa7.3□□□□□ -1.24
LSR1LSR1 UME6P39001 836 aa7.3□□□□□ -1.24
LSR1LSR1 CRH1P53301 507 aa7.3□□□□□ -1.24
LSR1LSR1 WSC2P53832 503 aa7.3□□□□□ -1.24
LSR1LSR1 RPS25AQ3E792 108 aaPredicted RBP7.3□□□□□ -1.24
LSR1LSR1 YMR31P19955 123 aa7.29□□□□□ -1.24
LSR1LSR1 DFG10P40526 253 aa7.29□□□□□ -1.24
LSR1LSR1 HIT1P46973 164 aa7.29□□□□□ -1.24
LSR1LSR1 YPL077CQ02831 240 aa7.29□□□□□ -1.24
LSR1LSR1 YPS3Q12303 508 aa7.29□□□□□ -1.24
LSR1LSR1 HAP3P13434 144 aa7.28□□□□□ -1.24
LSR1LSR1 YGL010WP25338 174 aa7.28□□□□□ -1.24
LSR1LSR1 GON7P46984 123 aa7.28□□□□□ -1.24
LSR1LSR1 RPN14P53196 417 aa7.28□□□□□ -1.24
LSR1LSR1 ECM18Q04623 453 aa7.28□□□□□ -1.24
LSR1LSR1 SMT3Q12306 101 aaKnown RBP7.28□□□□□ -1.24
LSR1LSR1 POM34Q12445 299 aa7.28□□□□□ -1.24
LSR1LSR1 VPS63O13549 108 aa7.27□□□□□ -1.25
LSR1LSR1 HMX1P32339 317 aa7.27□□□□□ -1.25
LSR1LSR1 SPS18P32572 300 aa7.27□□□□□ -1.25
LSR1LSR1 YKL102CP34249 101 aa7.27□□□□□ -1.25
LSR1LSR1 MIX23P38162 196 aa7.27□□□□□ -1.25
LSR1LSR1 PIC2P40035 300 aa7.27□□□□□ -1.25
LSR1LSR1 BOR1P53838 576 aa7.27□□□□□ -1.25
LSR1LSR1 CWC27Q02770 301 aa7.27□□□□□ -1.25
LSR1LSR1 TVP18Q04767 167 aa7.27□□□□□ -1.25
LSR1LSR1 YOR105WQ08504 108 aa7.27□□□□□ -1.25
LSR1LSR1 YPR014CQ6B0W2 109 aa7.27□□□□□ -1.25
LSR1LSR1 SEN1Q00416 2231 aaKnown RBP7.26□□□□□ -1.25
LSR1LSR1 GAR1P28007 205 aaKnown RBP7.26□□□□□ -1.25
LSR1LSR1 YHR138CP38841 114 aaPredicted RBP7.26□□□□□ -1.25
LSR1LSR1 SIP18P50263 79 aa7.26□□□□□ -1.25
LSR1LSR1 DYN2Q02647 92 aa7.26□□□□□ -1.25
LSR1LSR1 YPL067CQ02754 198 aa7.26□□□□□ -1.25
LSR1LSR1 YDR114CQ04597 100 aa7.26□□□□□ -1.25
LSR1LSR1 CNL1Q06333 122 aa7.26□□□□□ -1.25
LSR1LSR1 NAT3Q06504 195 aa7.26□□□□□ -1.25
LSR1LSR1 RPS22BQ3E7Y3 130 aaKnown RBP7.26□□□□□ -1.25
LSR1LSR1 POR1P04840 283 aaKnown RBP7.25□□□□□ -1.25
LSR1LSR1 SUA7P29055 345 aaPredicted RBP7.25□□□□□ -1.25
LSR1LSR1 YKL187CP34231 750 aa7.25□□□□□ -1.25
LSR1LSR1 DAD2P36162 133 aa7.25□□□□□ -1.25
LSR1LSR1 DER1P38307 211 aa7.25□□□□□ -1.25
LSR1LSR1 AME1P38313 324 aa7.25□□□□□ -1.25
LSR1LSR1 DOG1P38774 246 aa7.25□□□□□ -1.25
LSR1LSR1 DMA2P53924 522 aa7.25□□□□□ -1.25
LSR1LSR1 LIP2Q06005 328 aa7.25□□□□□ -1.25
LSR1LSR1 LOA1Q06508 300 aa7.25□□□□□ -1.25
LSR1LSR1 MCH1Q07376 486 aa7.25□□□□□ -1.25
LSR1LSR1 LDS2Q08218 356 aa7.25□□□□□ -1.25
LSR1LSR1 YGL258W-AQ3E740 77 aa7.25□□□□□ -1.25
LSR1LSR1 YCR007CP25354 239 aa7.24□□□□□ -1.25
LSR1LSR1 SRP21P32342 167 aa7.24□□□□□ -1.25
LSR1LSR1 PAU16P35994 123 aa7.24□□□□□ -1.25
LSR1LSR1 YJR015WP47090 510 aa7.24□□□□□ -1.25
LSR1LSR1 YNR064CP53750 290 aa7.24□□□□□ -1.25
LSR1LSR1 API2Q04413 109 aa7.24□□□□□ -1.25
LSR1LSR1 PAU23Q07987 124 aa7.24□□□□□ -1.25
LSR1LSR1 RFM1Q12192 310 aa7.24□□□□□ -1.25
LSR1LSR1 RNH203Q12338 110 aa7.24□□□□□ -1.25
LSR1LSR1 PAU17Q12370 124 aa7.24□□□□□ -1.25
LSR1LSR1 HEM4P06174 275 aa7.23□□□□□ -1.25
LSR1LSR1 MRS3P10566 314 aa7.23□□□□□ -1.25
LSR1LSR1 RNA15P25299 296 aaPredicted RBP7.23□□□□□ -1.25
LSR1LSR1 LDB16P25587 256 aa7.23□□□□□ -1.25
LSR1LSR1 SRP14P38985 146 aa7.23□□□□□ -1.25
LSR1LSR1 RPS26AP39938 119 aaKnown RBP7.23□□□□□ -1.25
LSR1LSR1 RPS26BP39939 119 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms