RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 TRIP13Q15645 432 aaPredicted RBP18.08■□□□□ 0.49
PHGDH-211ENST00000641213 SMYD5Q6GMV2 418 aa18.08■□□□□ 0.49
PHGDH-211ENST00000641213 DNAJC24Q6P3W2 148 aa18.08■□□□□ 0.49
PHGDH-211ENST00000641213 MAMDC4Q6UXC1 1216 aa18.08■□□□□ 0.49
PHGDH-211ENST00000641213 CCDC25Q86WR0 208 aa18.08■□□□□ 0.49
PHGDH-211ENST00000641213 CCDC114Q96M63 670 aa18.08■□□□□ 0.49
PHGDH-211ENST00000641213 MCEEQ96PE7 176 aa18.08■□□□□ 0.49
PHGDH-211ENST00000641213 AAASQ9NRG9 546 aa18.08■□□□□ 0.49
PHGDH-211ENST00000641213 NXF1Q9UBU9 619 aaKnown RBP18.08■□□□□ 0.49
PHGDH-211ENST00000641213 SIX4Q9UIU6 781 aa18.08■□□□□ 0.49
PHGDH-211ENST00000641213 NEU2Q9Y3R4 380 aa18.08■□□□□ 0.49
PHGDH-211ENST00000641213 CSDE1O75534 798 aaKnown RBP18.08■□□□□ 0.48
PHGDH-211ENST00000641213 KRT19P08727 400 aa18.08■□□□□ 0.48
PHGDH-211ENST00000641213 YWHAEP62258 255 aaKnown RBP18.08■□□□□ 0.48
PHGDH-211ENST00000641213 OGDHQ02218 1023 aa18.08■□□□□ 0.48
PHGDH-211ENST00000641213 POU5F1BQ06416 359 aa18.08■□□□□ 0.48
PHGDH-211ENST00000641213 BYSLQ13895 437 aaKnown RBP18.08■□□□□ 0.48
PHGDH-211ENST00000641213 FAM187BQ17R55 369 aa18.08■□□□□ 0.48
PHGDH-211ENST00000641213 ZNF792Q3KQV3 632 aa18.08■□□□□ 0.48
PHGDH-211ENST00000641213 PPP1R15BQ5SWA1 713 aa18.08■□□□□ 0.48
PHGDH-211ENST00000641213 ERICH1Q86X53 443 aa18.08■□□□□ 0.48
PHGDH-211ENST00000641213 UPF1Q92900 1129 aaKnown RBP eCLIP18.08■□□□□ 0.48
PHGDH-211ENST00000641213 FAM118BQ9BPY3 351 aa18.08■□□□□ 0.48
PHGDH-211ENST00000641213 TMEM109Q9BVC6 243 aa18.08■□□□□ 0.48
PHGDH-211ENST00000641213 PNMA3Q9UL41 463 aa18.08■□□□□ 0.48
PHGDH-211ENST00000641213 A0A087WZ62 844 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 TLDC2A0PJX2 215 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 MEFVO15553 781 aaPredicted RBP18.07■□□□□ 0.48
PHGDH-211ENST00000641213 NFICP08651 508 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 RAP1GAPP47736 663 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 NFX1Q12986 1120 aaKnown RBP18.07■□□□□ 0.48
PHGDH-211ENST00000641213 AMHR2Q16671 573 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 DCUN1D2Q6PH85 259 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 NLRP14Q86W24 1093 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 RCOR2Q8IZ40 523 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 TMEM130Q8N3G9 435 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 LINC01465Q8N7H1 131 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 GPRC5AQ8NFJ5 357 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 UHMK1Q8TAS1 419 aaKnown RBP18.07■□□□□ 0.48
PHGDH-211ENST00000641213 FDXACB1Q9BRP7 624 aaPredicted RBP18.07■□□□□ 0.48
PHGDH-211ENST00000641213 BCO2Q9BYV7 579 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 KLHL11Q9NVR0 708 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 SCN4AP35499 1836 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 LACTBL1A8MY62 500 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 F8VP50 259 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 PI4K2BG5E9Z4 385 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 GH1P01241 217 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 STAG3L1P0CL83 205 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 ITGA8P53708 1063 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 LACTBP83111 547 aaPredicted RBP18.07■□□□□ 0.48
PHGDH-211ENST00000641213 TAP1Q03518 808 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 ADCY2Q08462 1091 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 ZNF667Q5HYK9 610 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 CYP4A22Q5TCH4 519 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 DENND1BQ6P3S1 775 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 TRMT10CQ7L0Y3 403 aaKnown RBP18.07■□□□□ 0.48
PHGDH-211ENST00000641213 C1orf127Q8N9H9 656 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 MYCBPAPQ8TBZ2 947 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 SLC10A4Q96EP9 437 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 SCLT1Q96NL6 688 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 SLITRK1Q96PX8 696 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 CCT8L2Q96SF2 557 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 PPP1R16BQ96T49 567 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 PPANQ9NQ55 473 aaKnown RBP18.07■□□□□ 0.48
PHGDH-211ENST00000641213 CEP83Q9Y592 693 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 IVNS1ABPQ9Y6Y0 642 aa18.07■□□□□ 0.48
PHGDH-211ENST00000641213 E7EVH7 732 aa18.06■□□□□ 0.48
PHGDH-211ENST00000641213 MAGEB2O15479 319 aa18.06■□□□□ 0.48
PHGDH-211ENST00000641213 ATF2P15336 505 aa18.06■□□□□ 0.48
PHGDH-211ENST00000641213 ADORA2AP29274 412 aa18.06■□□□□ 0.48
PHGDH-211ENST00000641213 CHKAP35790 457 aa18.06■□□□□ 0.48
PHGDH-211ENST00000641213 ADCY8P40145 1251 aa18.06■□□□□ 0.48
PHGDH-211ENST00000641213 CETN2P41208 172 aa18.06■□□□□ 0.48
PHGDH-211ENST00000641213 WDR72Q3MJ13 1102 aa18.06■□□□□ 0.48
PHGDH-211ENST00000641213 C6orf118Q5T5N4 469 aa18.06■□□□□ 0.48
PHGDH-211ENST00000641213 LRRC38Q5VT99 294 aa18.06■□□□□ 0.48
PHGDH-211ENST00000641213 JADE1Q6IE81 842 aa18.06■□□□□ 0.48
PHGDH-211ENST00000641213 CROCCP2Q86T23 111 aa18.06■□□□□ 0.48
PHGDH-211ENST00000641213 IFNLR1Q8IU57 520 aaPredicted RBP18.06■□□□□ 0.48
PHGDH-211ENST00000641213 C3orf20Q8ND61 904 aa18.06■□□□□ 0.48
PHGDH-211ENST00000641213 ZNF473Q8WTR7 871 aaKnown RBP18.06■□□□□ 0.48
PHGDH-211ENST00000641213 GTF3C2Q8WUA4 911 aaPredicted RBP18.06■□□□□ 0.48
PHGDH-211ENST00000641213 RBM41Q96IZ5 413 aaKnown RBP18.06■□□□□ 0.48
PHGDH-211ENST00000641213 CDC42EP4Q9H3Q1 356 aaKnown RBP18.06■□□□□ 0.48
PHGDH-211ENST00000641213 VTA1Q9NP79 307 aa18.06■□□□□ 0.48
PHGDH-211ENST00000641213 SMIM23A6NLE4 172 aa18.05■□□□□ 0.48
PHGDH-211ENST00000641213 MCF2P10911 925 aa18.05■□□□□ 0.48
PHGDH-211ENST00000641213 CD19P15391 556 aa18.05■□□□□ 0.48
PHGDH-211ENST00000641213 CDH8P55286 799 aa18.05■□□□□ 0.48
PHGDH-211ENST00000641213 CCNA1P78396 465 aa18.05■□□□□ 0.48
PHGDH-211ENST00000641213 CAV1Q03135 178 aa18.05■□□□□ 0.48
PHGDH-211ENST00000641213 TNFAIP2Q03169 654 aa18.05■□□□□ 0.48
PHGDH-211ENST00000641213 PIGHQ14442 188 aaPredicted RBP18.05■□□□□ 0.48
PHGDH-211ENST00000641213 EAPPQ56P03 285 aaPredicted RBP18.05■□□□□ 0.48
PHGDH-211ENST00000641213 PPTC7Q8NI37 304 aa18.05■□□□□ 0.48
PHGDH-211ENST00000641213 EPS8L3Q8TE67 593 aaKnown RBP18.05■□□□□ 0.48
PHGDH-211ENST00000641213 AFG1LQ8WV93 481 aa18.05■□□□□ 0.48
PHGDH-211ENST00000641213 CPB2Q96IY4 423 aa18.05■□□□□ 0.48
PHGDH-211ENST00000641213 SYT17Q9BSW7 474 aa18.05■□□□□ 0.48
PHGDH-211ENST00000641213 DDX23Q9BUQ8 820 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms