RNA–Protein interactions for RNA: ENST00000639534.1

CHD1L-211, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 1,144 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-211ENST00000639534 ITGA4P13612 1032 aa15.4■□□□□ 0.06
CHD1L-211ENST00000639534 HOXA11P31270 313 aaPredicted RBP15.4■□□□□ 0.06
CHD1L-211ENST00000639534 CARSP49589 748 aaKnown RBP15.4■□□□□ 0.06
CHD1L-211ENST00000639534 RAD23BP54727 409 aa15.4■□□□□ 0.06
CHD1L-211ENST00000639534 DRG2P55039 364 aaKnown RBP15.4■□□□□ 0.06
CHD1L-211ENST00000639534 GJA9P57773 515 aa15.4■□□□□ 0.06
CHD1L-211ENST00000639534 NKX3-2P78367 333 aa15.4■□□□□ 0.06
CHD1L-211ENST00000639534 PTPN11Q06124 597 aaPredicted RBP15.4■□□□□ 0.06
CHD1L-211ENST00000639534 PIGHQ14442 188 aaPredicted RBP15.4■□□□□ 0.06
CHD1L-211ENST00000639534 LRRC38Q5VT99 294 aa15.4■□□□□ 0.06
CHD1L-211ENST00000639534 RSPH3Q86UC2 560 aa15.4■□□□□ 0.06
CHD1L-211ENST00000639534 REM2Q8IYK8 340 aaPredicted RBP15.4■□□□□ 0.06
CHD1L-211ENST00000639534 C1orf131Q8NDD1 294 aaKnown RBP15.4■□□□□ 0.06
CHD1L-211ENST00000639534 LRRC45Q96CN5 670 aa15.4■□□□□ 0.06
CHD1L-211ENST00000639534 BTBD6Q96KE9 485 aa15.4■□□□□ 0.06
CHD1L-211ENST00000639534 OSMRQ99650 979 aa15.4■□□□□ 0.06
CHD1L-211ENST00000639534 TRIM6Q9C030 488 aaPredicted RBP15.4■□□□□ 0.06
CHD1L-211ENST00000639534 CNTN3Q9P232 1028 aa15.4■□□□□ 0.06
CHD1L-211ENST00000639534 PARP2Q9UGN5 583 aa15.4■□□□□ 0.06
CHD1L-211ENST00000639534 PCYOX1Q9UHG3 505 aa15.4■□□□□ 0.06
CHD1L-211ENST00000639534 AMACRQ9UHK6 382 aa15.4■□□□□ 0.06
CHD1L-211ENST00000639534 BARX2Q9UMQ3 279 aaPredicted RBP15.4■□□□□ 0.06
CHD1L-211ENST00000639534 NFU1Q9UMS0 254 aa15.4■□□□□ 0.06
CHD1L-211ENST00000639534 UBQLN1Q9UMX0 589 aaKnown RBP15.4■□□□□ 0.06
CHD1L-211ENST00000639534 GOLGA6BA6NDN3 693 aa15.39■□□□□ 0.05
CHD1L-211ENST00000639534 TMEM191CA6NGB0 347 aa15.39■□□□□ 0.05
CHD1L-211ENST00000639534 MEFVO15553 781 aaPredicted RBP15.39■□□□□ 0.05
CHD1L-211ENST00000639534 CFHP08603 1231 aa15.39■□□□□ 0.05
CHD1L-211ENST00000639534 MARCKSL1P49006 195 aa15.39■□□□□ 0.05
CHD1L-211ENST00000639534 PURAQ00577 322 aaKnown RBP15.39■□□□□ 0.05
CHD1L-211ENST00000639534 HLTFQ14527 1009 aaKnown RBP eCLIP15.39■□□□□ 0.05
CHD1L-211ENST00000639534 SNX17Q15036 470 aa15.39■□□□□ 0.05
CHD1L-211ENST00000639534 CNGA2Q16280 664 aa15.39■□□□□ 0.05
CHD1L-211ENST00000639534 ZNF394Q53GI3 561 aa15.39■□□□□ 0.05
CHD1L-211ENST00000639534 RUFY4Q6ZNE9 571 aa15.39■□□□□ 0.05
CHD1L-211ENST00000639534 SYDE1Q6ZW31 735 aaPredicted RBP15.39■□□□□ 0.05
CHD1L-211ENST00000639534 GSPT2Q8IYD1 628 aaKnown RBP15.39■□□□□ 0.05
CHD1L-211ENST00000639534 KATNAL2Q8IYT4 538 aa15.39■□□□□ 0.05
CHD1L-211ENST00000639534 NIPA2Q8N8Q9 360 aa15.39■□□□□ 0.05
CHD1L-211ENST00000639534 C3orf20Q8ND61 904 aa15.39■□□□□ 0.05
CHD1L-211ENST00000639534 DNAJB3Q8WWF6 145 aa15.39■□□□□ 0.05
CHD1L-211ENST00000639534 MAGOHBQ96A72 148 aaKnown RBP15.39■□□□□ 0.05
CHD1L-211ENST00000639534 RUFY1Q96T51 708 aa15.39■□□□□ 0.05
CHD1L-211ENST00000639534 UPF3AQ9H1J1 476 aaKnown RBP15.39■□□□□ 0.05
CHD1L-211ENST00000639534 CHORDC1Q9UHD1 332 aaPredicted RBP15.39■□□□□ 0.05
CHD1L-211ENST00000639534 FEZ2Q9UHY8 353 aaPredicted RBP15.39■□□□□ 0.05
CHD1L-211ENST00000639534 TCRBV5S1A1TA0A578 114 aa15.38■□□□□ 0.05
CHD1L-211ENST00000639534 FAM170AA1A519 330 aa15.38■□□□□ 0.05
CHD1L-211ENST00000639534 M0QZ92 97 aa15.38■□□□□ 0.05
CHD1L-211ENST00000639534 PNPLA4P41247 253 aa15.38■□□□□ 0.05
CHD1L-211ENST00000639534 SNX16P57768 344 aa15.38■□□□□ 0.05
CHD1L-211ENST00000639534 MRPS25P82663 173 aaKnown RBP15.38■□□□□ 0.05
CHD1L-211ENST00000639534 MTMR3Q13615 1198 aa15.38■□□□□ 0.05
CHD1L-211ENST00000639534 ZNF268Q14587 947 aaPredicted RBP15.38■□□□□ 0.05
CHD1L-211ENST00000639534 ZBTB6Q15916 424 aa15.38■□□□□ 0.05
CHD1L-211ENST00000639534 SGO2Q562F6 1265 aa15.38■□□□□ 0.05
CHD1L-211ENST00000639534 SPDYCQ5MJ68 293 aa15.38■□□□□ 0.05
CHD1L-211ENST00000639534 DCUN1D2Q6PH85 259 aa15.38■□□□□ 0.05
CHD1L-211ENST00000639534 PRELID2Q8N945 189 aa15.38■□□□□ 0.05
CHD1L-211ENST00000639534 SLC4A11Q8NBS3 891 aa15.38■□□□□ 0.05
CHD1L-211ENST00000639534 EXD1Q8NHP7 514 aa15.38■□□□□ 0.05
CHD1L-211ENST00000639534 FNIP1Q8TF40 1166 aa15.38■□□□□ 0.05
CHD1L-211ENST00000639534 TFAP2BQ92481 460 aa15.38■□□□□ 0.05
CHD1L-211ENST00000639534 RBM41Q96IZ5 413 aaKnown RBP15.38■□□□□ 0.05
CHD1L-211ENST00000639534 ZNF560Q96MR9 790 aa15.38■□□□□ 0.05
CHD1L-211ENST00000639534 ERP44Q9BS26 406 aa15.38■□□□□ 0.05
CHD1L-211ENST00000639534 SDCBP2Q9H190 292 aa15.38■□□□□ 0.05
CHD1L-211ENST00000639534 LRRC19Q9H756 370 aa15.38■□□□□ 0.05
CHD1L-211ENST00000639534 SMYD3Q9H7B4 428 aa15.38■□□□□ 0.05
CHD1L-211ENST00000639534 SNTG2Q9NY99 539 aa15.38■□□□□ 0.05
CHD1L-211ENST00000639534 ABT1Q9ULW3 272 aaKnown RBP15.38■□□□□ 0.05
CHD1L-211ENST00000639534 GINS2Q9Y248 185 aa15.38■□□□□ 0.05
CHD1L-211ENST00000639534 TTI1O43156 1089 aa15.37■□□□□ 0.05
CHD1L-211ENST00000639534 TREHO43280 583 aa15.37■□□□□ 0.05
CHD1L-211ENST00000639534 SETSIPP0DME0 302 aa15.37■□□□□ 0.05
CHD1L-211ENST00000639534 CYBAP13498 195 aa15.37■□□□□ 0.05
CHD1L-211ENST00000639534 KCNE1P15382 129 aa15.37■□□□□ 0.05
CHD1L-211ENST00000639534 CYP3A5P20815 502 aa15.37■□□□□ 0.05
CHD1L-211ENST00000639534 FGFR4P22455 802 aa15.37■□□□□ 0.05
CHD1L-211ENST00000639534 HSPA9P38646 679 aaKnown RBP15.37■□□□□ 0.05
CHD1L-211ENST00000639534 RAP1GAPP47736 663 aa15.37■□□□□ 0.05
CHD1L-211ENST00000639534 COPS2P61201 443 aa15.37■□□□□ 0.05
CHD1L-211ENST00000639534 BEX3Q00994 111 aa15.37■□□□□ 0.05
CHD1L-211ENST00000639534 TMEM62Q0P6H9 643 aa15.37■□□□□ 0.05
CHD1L-211ENST00000639534 ACAP1Q15027 740 aa15.37■□□□□ 0.05
CHD1L-211ENST00000639534 PPP1R15BQ5SWA1 713 aa15.37■□□□□ 0.05
CHD1L-211ENST00000639534 CFAP58Q5T655 872 aa15.37■□□□□ 0.05
CHD1L-211ENST00000639534 SCARA3Q6AZY7 606 aa15.37■□□□□ 0.05
CHD1L-211ENST00000639534 DENND1BQ6P3S1 775 aa15.37■□□□□ 0.05
CHD1L-211ENST00000639534 ALKAL1Q6UXT8 129 aa15.37■□□□□ 0.05
CHD1L-211ENST00000639534 UNC93AQ86WB7 457 aa15.37■□□□□ 0.05
CHD1L-211ENST00000639534 HACE1Q8IYU2 909 aa15.37■□□□□ 0.05
CHD1L-211ENST00000639534 RCOR2Q8IZ40 523 aa15.37■□□□□ 0.05
CHD1L-211ENST00000639534 SMC1BQ8NDV3 1235 aa15.37■□□□□ 0.05
CHD1L-211ENST00000639534 GRK7Q8WTQ7 553 aa15.37■□□□□ 0.05
CHD1L-211ENST00000639534 SLCO2A1Q92959 643 aa15.37■□□□□ 0.05
CHD1L-211ENST00000639534 C18orf8Q96DM3 657 aa15.37■□□□□ 0.05
CHD1L-211ENST00000639534 DDX27Q96GQ7 796 aaKnown RBP15.37■□□□□ 0.05
CHD1L-211ENST00000639534 NT5C1AQ9BXI3 368 aa15.37■□□□□ 0.05
CHD1L-211ENST00000639534 ELOVL4Q9GZR5 314 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms