RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 RHOBTB2Q9BYZ6 727 aa17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 ANTXR1Q9H6X2 564 aa17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 SH3GLB2Q9NR46 395 aa17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 TRIM10Q9UDY6 481 aa17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 TEX33O43247 280 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 CKBP12277 381 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 IPPQ9Y573 584 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 SMAPO00193 183 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 TMC5Q6UXY8 1006 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 PTPRN2Q92932 1015 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 DNAJC12Q9UKB3 198 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 ABCC2Q92887 1545 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 HAUS5O94927 633 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 HMGCS2P54868 508 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 GPR108Q9NPR9 543 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 LCMT1Q9UIC8 334 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 USP17L15C9J2P7 530 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 USP17L13C9JLJ4 530 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 USP17L11C9JVI0 530 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 USP17L18D6R9N7 530 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 USP17L22D6RA61 530 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 USP17L17D6RBQ6 530 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 USP17L19D6RCP7 530 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 USP17L20D6RJB6 530 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 MYBL1P10243 752 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 ARFIP2P53365 341 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 USP17L24Q0WX57 530 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 USP17L6PQ6QN14 398 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 GATAD2AQ86YP4 633 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 CYP4X1Q8N118 509 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 ARHGEF38Q9NXL2 777 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 KLK14Q9P0G3 267 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 MARSP56192 900 aaKnown RBP17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 SLC30A9Q6PML9 568 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 C2orf40Q9H1Z8 148 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 FAM49BQ9NUQ9 324 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 CCNE1P24864 410 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 HSD3B2P26439 372 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 BBS7Q8IWZ6 715 aa17.03■□□□□ 0.32
CACNA1A-258ENST00000638029 ITGA4P13612 1032 aa17.02■□□□□ 0.32
CACNA1A-258ENST00000638029 NOS3P29474 1203 aa17.02■□□□□ 0.32
CACNA1A-258ENST00000638029 PRIM2P49643 509 aa17.02■□□□□ 0.32
CACNA1A-258ENST00000638029 CCR4P51679 360 aa17.02■□□□□ 0.32
CACNA1A-258ENST00000638029 R3HCC1LQ7Z5L2 792 aaKnown RBP17.02■□□□□ 0.32
CACNA1A-258ENST00000638029 MMGT1Q8N4V1 131 aa17.02■□□□□ 0.32
CACNA1A-258ENST00000638029 CALML6Q8TD86 181 aa17.02■□□□□ 0.32
CACNA1A-258ENST00000638029 TASP1Q9H6P5 420 aa17.02■□□□□ 0.32
CACNA1A-258ENST00000638029 VCLP18206 1134 aa17.02■□□□□ 0.32
CACNA1A-258ENST00000638029 VAMP7P51809 220 aa17.02■□□□□ 0.32
CACNA1A-258ENST00000638029 CCDC33Q8N5R6 958 aa17.02■□□□□ 0.32
CACNA1A-258ENST00000638029 IPMKQ8NFU5 416 aa17.02■□□□□ 0.32
CACNA1A-258ENST00000638029 BICRAQ9NZM4 1560 aa17.02■□□□□ 0.32
CACNA1A-258ENST00000638029 ABCB1P08183 1280 aaPredicted RBP17.02■□□□□ 0.32
CACNA1A-258ENST00000638029 CHRNA5P30532 468 aa17.02■□□□□ 0.32
CACNA1A-258ENST00000638029 GSSP48637 474 aa17.02■□□□□ 0.32
CACNA1A-258ENST00000638029 ARSEP51690 589 aa17.02■□□□□ 0.32
CACNA1A-258ENST00000638029 POTEEQ6S8J3 1075 aa17.02■□□□□ 0.32
CACNA1A-258ENST00000638029 WNK4Q96J92 1243 aa17.02■□□□□ 0.32
CACNA1A-258ENST00000638029 KLHL1Q9NR64 748 aa17.02■□□□□ 0.32
CACNA1A-258ENST00000638029 INTS13Q9NVM9 706 aa17.02■□□□□ 0.32
CACNA1A-258ENST00000638029 BSDC1Q9NW68 430 aaPredicted RBP17.02■□□□□ 0.32
CACNA1A-258ENST00000638029 AP3B1O00203 1094 aa17.02■□□□□ 0.31
CACNA1A-258ENST00000638029 PLEKHA8P1O95397 391 aa17.02■□□□□ 0.31
CACNA1A-258ENST00000638029 FAM107AO95990 144 aa17.02■□□□□ 0.31
CACNA1A-258ENST00000638029 DGKKQ5KSL6 1271 aa17.02■□□□□ 0.31
CACNA1A-258ENST00000638029 CALR3Q96L12 384 aaKnown RBP17.02■□□□□ 0.31
CACNA1A-258ENST00000638029 LIMA1Q9UHB6 759 aaKnown RBP17.02■□□□□ 0.31
CACNA1A-258ENST00000638029 DSG3P32926 999 aa17.02■□□□□ 0.31
CACNA1A-258ENST00000638029 STARD3Q14849 445 aa17.02■□□□□ 0.31
CACNA1A-258ENST00000638029 DCAF6Q58WW2 860 aa17.02■□□□□ 0.31
CACNA1A-258ENST00000638029 NEK10Q6ZWH5 1172 aa17.02■□□□□ 0.31
CACNA1A-258ENST00000638029 PODNQ7Z5L7 613 aa17.02■□□□□ 0.31
CACNA1A-258ENST00000638029 RNF180Q86T96 592 aa17.02■□□□□ 0.31
CACNA1A-258ENST00000638029 BTBD9Q96Q07 612 aa17.02■□□□□ 0.31
CACNA1A-258ENST00000638029 KRCC1Q9NPI7 259 aaPredicted RBP17.02■□□□□ 0.31
CACNA1A-258ENST00000638029 KCNA3P22001 575 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 PEX5P50542 639 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 BCAR1P56945 870 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 HUNKP57058 714 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 HIST2H2ACQ16777 129 aaPredicted RBP17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 ARL6IP4Q66PJ3 421 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 HIST2H2AA3Q6FI13 130 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 CDH24Q86UP0 819 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 XXYLT1Q8NBI6 393 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 NAGPAQ9UK23 515 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 PTPRTO14522 1441 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 FAM25AB3EWG3 89 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 FAM25CB3EWG5 89 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 FAM25GB3EWG6 89 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 PNMA6AP0CW24 399 aaPredicted RBP17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 KIF23Q02241 960 aaPredicted RBP17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 SNX30Q5VWJ9 437 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 STX12Q86Y82 276 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 FBXO40Q9UH90 709 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 ANAPC2Q9UJX6 822 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 ZBTB5O15062 677 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 NCK2O43639 380 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 SKIV2L2P42285 1042 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 VSNL1P62760 191 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 POLD3Q15054 466 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms