RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 IKBIPQ70UQ0 350 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 OVCH2Q7RTZ1 564 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 ATG9AQ7Z3C6 839 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 DGLUCYQ7Z3D6 616 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 DPP9Q86TI2 863 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 LRRTM4Q86VH4 590 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 CACNA2D3Q8IZS8 1091 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 ANKRD35Q8N283 1001 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 PRR18Q8N4B5 295 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 PDCL2Q8N4E4 241 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 AADATQ8N5Z0 425 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 GBP7Q8N8V2 638 aaPredicted RBP3.27□□□□□ -1.89
VIM-210ENST00000637053 C19orf47Q8N9M1 422 aaKnown RBP3.27□□□□□ -1.89
VIM-210ENST00000637053 C1orf162Q8NEQ5 155 aaPredicted RBP3.27□□□□□ -1.89
VIM-210ENST00000637053 FAM76AQ8TAV0 307 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 RNF139Q8WU17 664 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 ZFAND2BQ8WV99 257 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 CDCA5Q96FF9 252 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 FAXDC2Q96IV6 333 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 EPSTI1Q96J88 318 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 ZDHHC15Q96MV8 337 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 RUNDC3BQ96NL0 473 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 FNBP1Q96RU3 617 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 YME1L1Q96TA2 773 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 ACO2Q99798 780 aaKnown RBP3.27□□□□□ -1.89
VIM-210ENST00000637053 RHOXF2Q9BQY4 288 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 LRRC3Q9BY71 257 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 OR10A4Q9H209 315 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 CLSTN2Q9H4D0 955 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 JMJD4Q9H9V9 463 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 TRIM39Q9HCM9 518 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 CD93Q9NPY3 652 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 CCDC177Q9NQR7 707 aaPredicted RBP3.27□□□□□ -1.89
VIM-210ENST00000637053 HOMER3Q9NSC5 361 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 TBCCD1Q9NVR7 557 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 ETAA1Q9NY74 926 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 IL20Q9NYY1 176 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 EXTL2Q9UBQ6 330 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 STK39Q9UEW8 545 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 SSX2IPQ9Y2D8 614 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 PCDHB12Q9Y5F1 795 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 TNPO3Q9Y5L0 923 aaKnown RBP3.27□□□□□ -1.89
VIM-210ENST00000637053 AP1M2Q9Y6Q5 423 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 USP19O94966 1318 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 A0A1W2PQH9 124 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 CLRN2A0PK11 232 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 PI4KAP2A4QPH2 592 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 KRT87PA6NCN2 255 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 IKBKBO14920 756 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 PLSCR1O15162 318 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 DAPK3O43293 454 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 MTSS1O43312 755 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 NCK2O43639 380 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 SUSD5O60279 629 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 OPA1O60313 960 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 PCDHGA12O60330 932 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 FMO6PO60774 539 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 GLRX3O76003 335 aaKnown RBP3.26□□□□□ -1.89
VIM-210ENST00000637053 SLITRK3O94933 977 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 FSBPO95073 299 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 TRIM16O95361 564 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 HEXBP07686 556 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 COL6A2P12110 1019 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 PRLRP16471 622 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 ARF4P18085 180 aaPredicted RBP3.26□□□□□ -1.89
VIM-210ENST00000637053 HLA-DPA1P20036 260 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 HOXA11P31270 313 aaPredicted RBP3.26□□□□□ -1.89
VIM-210ENST00000637053 PIK3CBP42338 1070 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 TECP42680 631 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 MTIF2P46199 727 aaKnown RBP3.26□□□□□ -1.89
VIM-210ENST00000637053 LIG3P49916 1009 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 GPC3P51654 580 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 GTF2A1P52655 376 aaPredicted RBP3.26□□□□□ -1.89
VIM-210ENST00000637053 IFI35P80217 286 aaPredicted RBP3.26□□□□□ -1.89
VIM-210ENST00000637053 COG7P83436 770 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 ZNF200P98182 395 aaPredicted RBP3.26□□□□□ -1.89
VIM-210ENST00000637053 ITIH3Q06033 890 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 AUHQ13825 339 aaKnown RBP3.26□□□□□ -1.89
VIM-210ENST00000637053 MLECQ14165 292 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 CDSNQ15517 529 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 HSF5Q4G112 596 aaPredicted RBP3.26□□□□□ -1.89
VIM-210ENST00000637053 SFMBT2Q5VUG0 894 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 IZUMO3Q5VZ72 239 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 FCRLBQ6BAA4 426 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 TTBK2Q6IQ55 1244 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 ARHGAP11AQ6P4F7 1023 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 RNF111Q6ZNA4 994 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 RGS9BPQ6ZS82 235 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 TTLL7Q6ZT98 887 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 CENPQQ7L2Z9 268 aaPredicted RBP3.26□□□□□ -1.89
VIM-210ENST00000637053 ZNF804AQ7Z570 1209 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 CCDC13Q8IYE1 715 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 KRT78Q8N1N4 520 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 CAMKK1Q8N5S9 505 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 C2orf69Q8N8R5 385 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 ANKRD53Q8N9V6 530 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 RBBP8NLQ8NC74 664 aaPredicted RBP3.26□□□□□ -1.89
VIM-210ENST00000637053 BBOF1Q8ND07 529 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 SIMC1Q8NDZ2 872 aa3.26□□□□□ -1.89
VIM-210ENST00000637053 DENND6BQ8NEG7 585 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms