RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 CBWD1Q9BRT8 395 aa16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 ASCC2Q9H1I8 757 aaPredicted RBP16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 KRT82Q9NSB4 513 aa16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 SMAPO00193 183 aa16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 PROSCO94903 275 aa16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 MAPTP10636 758 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 OVGP1Q12889 678 aa16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 THOC5Q13769 683 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 KATNAL2Q8IYT4 538 aa16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 SKA1Q96BD8 255 aa16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 NT5C1BQ96P26 610 aa16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 DDX4Q9NQI0 724 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 ZNF536O15090 1300 aa16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 WDR91A4D1P6 747 aa16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 GAS7O60861 476 aa16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 TGDSO95455 350 aa16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 SERPINB3P29508 390 aa16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 HOXA13P31271 388 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 PGM1P36871 562 aa16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 PIK3CAP42336 1068 aa16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 GPSM2P81274 684 aa16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 EFHC2Q5JST6 749 aa16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 ZBED8Q8IZ13 594 aa16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 HELQQ8TDG4 1101 aa16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 MRRFQ96E11 262 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 CENPKQ9BS16 269 aa16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 TSSK1BQ9BXA7 367 aa16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 IL1RAPL1Q9NZN1 696 aa16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 GGA1Q9UJY5 639 aa16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 CREB3O43889 395 aa16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 COQ9O75208 318 aa16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 RARBP10826 455 aa16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 RAP1GDS1P52306 607 aa16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 SNRPFP62306 86 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 FASTKD3Q14CZ7 662 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 CCDC142Q17RM4 750 aa16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 WDR72Q3MJ13 1102 aa16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 C6orf163Q5TEZ5 329 aa16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 KRT39Q6A163 491 aa16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 RINLQ6ZS11 566 aa16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 CAPN12Q6ZSI9 719 aa16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 EXD1Q8NHP7 514 aa16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 NCSTNQ92542 709 aa16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 NYAP2Q9P242 653 aa16.4■□□□□ 0.22
CACNA1A-235ENST00000637004 A0A1B0GVG6 124 aa16.39■□□□□ 0.21
CACNA1A-235ENST00000637004 UBTFL6P0CB48 400 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-235ENST00000637004 EEF2P13639 858 aaKnown RBP16.39■□□□□ 0.21
CACNA1A-235ENST00000637004 PHBP35232 272 aa16.39■□□□□ 0.21
CACNA1A-235ENST00000637004 DSG1Q02413 1049 aa16.39■□□□□ 0.21
CACNA1A-235ENST00000637004 DAW1Q8N136 415 aa16.39■□□□□ 0.21
CACNA1A-235ENST00000637004 PLEKHO2Q8TD55 490 aa16.39■□□□□ 0.21
CACNA1A-235ENST00000637004 OPTNQ96CV9 577 aa16.39■□□□□ 0.21
CACNA1A-235ENST00000637004 SPATA16Q9BXB7 569 aa16.39■□□□□ 0.21
CACNA1A-235ENST00000637004 WDR11Q9BZH6 1224 aa16.39■□□□□ 0.21
CACNA1A-235ENST00000637004 PRDM16Q9HAZ2 1276 aa16.39■□□□□ 0.21
CACNA1A-235ENST00000637004 ZNF148Q9UQR1 794 aa16.39■□□□□ 0.21
CACNA1A-235ENST00000637004 TISP43B9A030 160 aa16.39■□□□□ 0.21
CACNA1A-235ENST00000637004 MAGEC1O60732 1142 aa16.39■□□□□ 0.21
CACNA1A-235ENST00000637004 GPC3P51654 580 aa16.39■□□□□ 0.21
CACNA1A-235ENST00000637004 ARSEP51690 589 aa16.39■□□□□ 0.21
CACNA1A-235ENST00000637004 IKQ13123 557 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-235ENST00000637004 HP1BP3Q5SSJ5 553 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-235ENST00000637004 KBTBD2Q8IY47 623 aa16.39■□□□□ 0.21
CACNA1A-235ENST00000637004 ZNF276Q8N554 614 aa16.39■□□□□ 0.21
CACNA1A-235ENST00000637004 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.39■□□□□ 0.21
CACNA1A-235ENST00000637004 CCDC110Q8TBZ0 833 aa16.39■□□□□ 0.21
CACNA1A-235ENST00000637004 SEMA4DQ92854 862 aa16.39■□□□□ 0.21
CACNA1A-235ENST00000637004 WDR18Q9BV38 432 aa16.39■□□□□ 0.21
CACNA1A-235ENST00000637004 RANBP17Q9H2T7 1088 aaKnown RBP16.39■□□□□ 0.21
CACNA1A-235ENST00000637004 SHOC2Q9UQ13 582 aa16.39■□□□□ 0.21
CACNA1A-235ENST00000637004 LIASO43766 372 aa16.38■□□□□ 0.21
CACNA1A-235ENST00000637004 UNGP13051 313 aaPredicted RBP16.38■□□□□ 0.21
CACNA1A-235ENST00000637004 SNAP25P60880 206 aa16.38■□□□□ 0.21
CACNA1A-235ENST00000637004 GPS1Q13098 491 aa16.38■□□□□ 0.21
CACNA1A-235ENST00000637004 CNPY1Q3B7I2 92 aa16.38■□□□□ 0.21
CACNA1A-235ENST00000637004 EAPPQ56P03 285 aaPredicted RBP16.38■□□□□ 0.21
CACNA1A-235ENST00000637004 FAM91A1Q658Y4 838 aa16.38■□□□□ 0.21
CACNA1A-235ENST00000637004 DRICH1Q6PGQ1 229 aaPredicted RBP16.38■□□□□ 0.21
CACNA1A-235ENST00000637004 TCP10LQ8TDR4 215 aa16.38■□□□□ 0.21
CACNA1A-235ENST00000637004 OLFM3Q96PB7 478 aa16.38■□□□□ 0.21
CACNA1A-235ENST00000637004 NDNQ99608 321 aa16.38■□□□□ 0.21
CACNA1A-235ENST00000637004 TMEM120AQ9BXJ8 343 aa16.38■□□□□ 0.21
CACNA1A-235ENST00000637004 ZCWPW1Q9H0M4 648 aa16.38■□□□□ 0.21
CACNA1A-235ENST00000637004 DNAJB4Q9UDY4 337 aa16.38■□□□□ 0.21
CACNA1A-235ENST00000637004 COQ4Q9Y3A0 265 aa16.38■□□□□ 0.21
CACNA1A-235ENST00000637004 COL24A1Q17RW2 1714 aa16.38■□□□□ 0.21
CACNA1A-235ENST00000637004 KRT5P13647 590 aa16.38■□□□□ 0.21
CACNA1A-235ENST00000637004 PDIA2Q13087 525 aaKnown RBP16.38■□□□□ 0.21
CACNA1A-235ENST00000637004 OGFOD1Q8N543 542 aa16.38■□□□□ 0.21
CACNA1A-235ENST00000637004 LBHD1Q9BQE6 289 aaPredicted RBP16.38■□□□□ 0.21
CACNA1A-235ENST00000637004 WASF2Q9Y6W5 498 aa16.38■□□□□ 0.21
CACNA1A-235ENST00000637004 COMMD3-BMI1R4GMX3 469 aa16.38■□□□□ 0.21
CACNA1A-235ENST00000637004 CIB2O75838 187 aa16.37■□□□□ 0.21
CACNA1A-235ENST00000637004 ZCCHC18P0CG32 403 aa16.37■□□□□ 0.21
CACNA1A-235ENST00000637004 RANBP1P43487 201 aa16.37■□□□□ 0.21
CACNA1A-235ENST00000637004 MCL1Q07820 350 aa16.37■□□□□ 0.21
CACNA1A-235ENST00000637004 MTA1Q13330 715 aa16.37■□□□□ 0.21
CACNA1A-235ENST00000637004 CERKLQ49MI3 558 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms