RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 OSMP13725 252 aa4.07□□□□□ -1.76
CDKL5-208ENST00000624953 C5AR1P21730 350 aa4.07□□□□□ -1.76
CDKL5-208ENST00000624953 NR4A1P22736 598 aa4.07□□□□□ -1.76
CDKL5-208ENST00000624953 HIBADHP31937 336 aaKnown RBP4.07□□□□□ -1.76
CDKL5-208ENST00000624953 MAN2A2P49641 1150 aa4.07□□□□□ -1.76
CDKL5-208ENST00000624953 CDK17Q00537 523 aa4.07□□□□□ -1.76
CDKL5-208ENST00000624953 BMT2Q1RMZ1 405 aa4.07□□□□□ -1.76
CDKL5-208ENST00000624953 BRDTQ58F21 947 aaPredicted RBP4.07□□□□□ -1.76
CDKL5-208ENST00000624953 ANKS6Q68DC2 871 aa4.07□□□□□ -1.76
CDKL5-208ENST00000624953 IGFL4Q6B9Z1 124 aa4.07□□□□□ -1.76
CDKL5-208ENST00000624953 OTUD7BQ6GQQ9 843 aa4.07□□□□□ -1.76
CDKL5-208ENST00000624953 FAM83AQ86UY5 434 aa4.07□□□□□ -1.76
CDKL5-208ENST00000624953 ELOA2Q8IYF1 753 aaPredicted RBP4.07□□□□□ -1.76
CDKL5-208ENST00000624953 GPRC5BQ9NZH0 403 aa4.07□□□□□ -1.76
CDKL5-208ENST00000624953 COL6A3P12111 3177 aa4.07□□□□□ -1.76
CDKL5-208ENST00000624953 COL15A1P39059 1388 aa4.06□□□□□ -1.76
CDKL5-208ENST00000624953 SOS1Q07889 1333 aaPredicted RBP4.06□□□□□ -1.76
CDKL5-208ENST00000624953 TBKBP1A7MCY6 615 aa4.06□□□□□ -1.76
CDKL5-208ENST00000624953 CXorf49A8MYA2 514 aaPredicted RBP4.06□□□□□ -1.76
CDKL5-208ENST00000624953 AHRRA9YTQ3 701 aa4.06□□□□□ -1.76
CDKL5-208ENST00000624953 OVOL3O00110 214 aa4.06□□□□□ -1.76
CDKL5-208ENST00000624953 TRIM24O15164 1050 aa4.06□□□□□ -1.76
CDKL5-208ENST00000624953 NARSO43776 548 aaKnown RBP4.06□□□□□ -1.76
CDKL5-208ENST00000624953 PRAMEF4O60810 478 aa4.06□□□□□ -1.76
CDKL5-208ENST00000624953 DDNO94850 711 aaPredicted RBP4.06□□□□□ -1.76
CDKL5-208ENST00000624953 ZSCAN20P17040 1043 aaPredicted RBP4.06□□□□□ -1.76
CDKL5-208ENST00000624953 TACR2P21452 398 aa4.06□□□□□ -1.76
CDKL5-208ENST00000624953 RFC4P35249 363 aa4.06□□□□□ -1.76
CDKL5-208ENST00000624953 FXR1P51114 621 aaKnown RBP eCLIP4.06□□□□□ -1.76
CDKL5-208ENST00000624953 PTTG1IPP53801 180 aa4.06□□□□□ -1.76
CDKL5-208ENST00000624953 APBA1Q02410 837 aa4.06□□□□□ -1.76
CDKL5-208ENST00000624953 HHEXQ03014 270 aa4.06□□□□□ -1.76
CDKL5-208ENST00000624953 MTM1Q13496 603 aa4.06□□□□□ -1.76
CDKL5-208ENST00000624953 ODF1Q14990 250 aa4.06□□□□□ -1.76
CDKL5-208ENST00000624953 PCBP2Q15366 365 aaKnown RBP eCLIP4.06□□□□□ -1.76
CDKL5-208ENST00000624953 ABCB5Q2M3G0 1257 aa4.06□□□□□ -1.76
CDKL5-208ENST00000624953 PCSK4Q6UW60 755 aa4.06□□□□□ -1.76
CDKL5-208ENST00000624953 SEM1Q6ZVN7 128 aa4.06□□□□□ -1.76
CDKL5-208ENST00000624953 AMER2Q8N7J2 671 aa4.06□□□□□ -1.76
CDKL5-208ENST00000624953 LENG9Q96B70 501 aa4.06□□□□□ -1.76
CDKL5-208ENST00000624953 DMRTA2Q96SC8 542 aa4.06□□□□□ -1.76
CDKL5-208ENST00000624953 NEU1Q99519 415 aa4.06□□□□□ -1.76
CDKL5-208ENST00000624953 SLC23A1Q9UHI7 598 aa4.06□□□□□ -1.76
CDKL5-208ENST00000624953 HS3ST4Q9Y661 456 aa4.06□□□□□ -1.76
CDKL5-208ENST00000624953 LRRC37AA6NMS7 1700 aa4.06□□□□□ -1.76
CDKL5-208ENST00000624953 ZNF541Q9H0D2 1346 aa4.05□□□□□ -1.76
CDKL5-208ENST00000624953 DDX60Q8IY21 1712 aaKnown RBP4.05□□□□□ -1.76
CDKL5-208ENST00000624953 ANKRD62A6NC57 917 aa4.05□□□□□ -1.76
CDKL5-208ENST00000624953 FAM171A2A8MVW0 826 aa4.05□□□□□ -1.76
CDKL5-208ENST00000624953 GOLGA6L6A8MZA4 724 aa4.05□□□□□ -1.76
CDKL5-208ENST00000624953 SGTAO43765 313 aa4.05□□□□□ -1.76
CDKL5-208ENST00000624953 MFAP3LO75121 409 aa4.05□□□□□ -1.76
CDKL5-208ENST00000624953 NDUFS2O75306 463 aa4.05□□□□□ -1.76
CDKL5-208ENST00000624953 ENDOD1O94919 500 aa4.05□□□□□ -1.76
CDKL5-208ENST00000624953 SLPIP03973 132 aa4.05□□□□□ -1.76
CDKL5-208ENST00000624953 PCSK1P29120 753 aa4.05□□□□□ -1.76
CDKL5-208ENST00000624953 ECHS1P30084 290 aa4.05□□□□□ -1.76
CDKL5-208ENST00000624953 CTCFP49711 727 aaPredicted RBP4.05□□□□□ -1.76
CDKL5-208ENST00000624953 ADKP55263 362 aaKnown RBP4.05□□□□□ -1.76
CDKL5-208ENST00000624953 EXOSC10Q01780 885 aaKnown RBP4.05□□□□□ -1.76
CDKL5-208ENST00000624953 KRTAP1-1Q07627 177 aa4.05□□□□□ -1.76
CDKL5-208ENST00000624953 EIF4A2Q14240 407 aaKnown RBP4.05□□□□□ -1.76
CDKL5-208ENST00000624953 RABL3Q5HYI8 236 aa4.05□□□□□ -1.76
CDKL5-208ENST00000624953 SGMS1Q86VZ5 419 aa4.05□□□□□ -1.76
CDKL5-208ENST00000624953 C1orf210Q8IVY1 113 aa4.05□□□□□ -1.76
CDKL5-208ENST00000624953 ZGPATQ8N5A5 531 aaKnown RBP4.05□□□□□ -1.76
CDKL5-208ENST00000624953 OR5M3Q8NGP4 307 aa4.05□□□□□ -1.76
CDKL5-208ENST00000624953 FUBP1Q96AE4 644 aaKnown RBP4.05□□□□□ -1.76
CDKL5-208ENST00000624953 COA7Q96BR5 231 aa4.05□□□□□ -1.76
CDKL5-208ENST00000624953 CYFIP2Q96F07 1278 aa4.05□□□□□ -1.76
CDKL5-208ENST00000624953 TEKT5Q96M29 485 aa4.05□□□□□ -1.76
CDKL5-208ENST00000624953 GPR87Q9BY21 358 aa4.05□□□□□ -1.76
CDKL5-208ENST00000624953 POLKQ9UBT6 870 aa4.05□□□□□ -1.76
CDKL5-208ENST00000624953 CLCA2Q9UQC9 943 aa4.05□□□□□ -1.76
CDKL5-208ENST00000624953 ZBTB1Q9Y2K1 713 aa4.05□□□□□ -1.76
CDKL5-208ENST00000624953 COL4A1P02462 1669 aa4.05□□□□□ -1.76
CDKL5-208ENST00000624953 SPEF2Q9C093 1822 aa4.05□□□□□ -1.76
CDKL5-208ENST00000624953 ERVV-2B6SEH9 535 aa4.04□□□□□ -1.76
CDKL5-208ENST00000624953 HTRA2O43464 458 aaPredicted RBP4.04□□□□□ -1.76
CDKL5-208ENST00000624953 AKR1B10O60218 316 aa4.04□□□□□ -1.76
CDKL5-208ENST00000624953 MT-CO1P00395 513 aa4.04□□□□□ -1.76
CDKL5-208ENST00000624953 SERPINB2P05120 415 aa4.04□□□□□ -1.76
CDKL5-208ENST00000624953 CYP19A1P11511 503 aaPredicted RBP4.04□□□□□ -1.76
CDKL5-208ENST00000624953 GNAT2P19087 354 aa4.04□□□□□ -1.76
CDKL5-208ENST00000624953 DGCR2P98153 550 aa4.04□□□□□ -1.76
CDKL5-208ENST00000624953 PTH1RQ03431 593 aa4.04□□□□□ -1.76
CDKL5-208ENST00000624953 DACT2Q5SW24 774 aa4.04□□□□□ -1.76
CDKL5-208ENST00000624953 FAM102AQ5T9C2 384 aaPredicted RBP4.04□□□□□ -1.76
CDKL5-208ENST00000624953 OLFM4Q6UX06 510 aa4.04□□□□□ -1.76
CDKL5-208ENST00000624953 LRRC55Q6ZSA7 311 aa4.04□□□□□ -1.76
CDKL5-208ENST00000624953 PDZD4Q76G19 769 aaPredicted RBP4.04□□□□□ -1.76
CDKL5-208ENST00000624953 ZFPM1Q8IX07 1006 aa4.04□□□□□ -1.76
CDKL5-208ENST00000624953 DNAJC10Q8IXB1 793 aa4.04□□□□□ -1.76
CDKL5-208ENST00000624953 CMTR2Q8IYT2 770 aaKnown RBP4.04□□□□□ -1.76
CDKL5-208ENST00000624953 REPS2Q8NFH8 660 aa4.04□□□□□ -1.76
CDKL5-208ENST00000624953 SLC35B2Q8TB61 432 aa4.04□□□□□ -1.76
CDKL5-208ENST00000624953 MDM1Q8TC05 714 aa4.04□□□□□ -1.76
CDKL5-208ENST00000624953 ATXN2LQ8WWM7 1075 aaKnown RBP4.04□□□□□ -1.76
CDKL5-208ENST00000624953 ARL8AQ96BM9 186 aa4.04□□□□□ -1.76
CDKL5-208ENST00000624953 MRGPRX4Q96LA9 322 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms