RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 SHKBP1Q8TBC3 707 aa18.52■□□□□ 0.56
HMGN3-203ENST00000620514 LRRC3Q9BY71 257 aa18.52■□□□□ 0.56
HMGN3-203ENST00000620514 ASAH2Q9NR71 780 aa18.52■□□□□ 0.56
HMGN3-203ENST00000620514 FAM13BQ9NYF5 915 aa18.52■□□□□ 0.56
HMGN3-203ENST00000620514 RCOR1Q9UKL0 485 aa18.52■□□□□ 0.56
HMGN3-203ENST00000620514 DSEQ9UL01 958 aa18.52■□□□□ 0.56
HMGN3-203ENST00000620514 CFAP45Q9UL16 551 aa18.52■□□□□ 0.56
HMGN3-203ENST00000620514 MICAL2O94851 1124 aa18.51■□□□□ 0.55
HMGN3-203ENST00000620514 AFMP43652 599 aa18.51■□□□□ 0.55
HMGN3-203ENST00000620514 EPHB3P54753 998 aa18.51■□□□□ 0.55
HMGN3-203ENST00000620514 EHHADHQ08426 723 aa18.51■□□□□ 0.55
HMGN3-203ENST00000620514 TEAD2Q15562 447 aa18.51■□□□□ 0.55
HMGN3-203ENST00000620514 PHLDB3Q6NSJ2 640 aa18.51■□□□□ 0.55
HMGN3-203ENST00000620514 UNC13DQ70J99 1090 aa18.51■□□□□ 0.55
HMGN3-203ENST00000620514 LRRTM3Q86VH5 581 aa18.51■□□□□ 0.55
HMGN3-203ENST00000620514 TMC8Q8IU68 726 aa18.51■□□□□ 0.55
HMGN3-203ENST00000620514 CBWD2Q8IUF1 395 aa18.51■□□□□ 0.55
HMGN3-203ENST00000620514 DTWD2Q8NBA8 298 aa18.51■□□□□ 0.55
HMGN3-203ENST00000620514 ZNF507Q8TCN5 953 aa18.51■□□□□ 0.55
HMGN3-203ENST00000620514 CACTINQ8WUQ7 758 aaKnown RBP18.51■□□□□ 0.55
HMGN3-203ENST00000620514 ZNF560Q96MR9 790 aa18.51■□□□□ 0.55
HMGN3-203ENST00000620514 FOXQ1Q9C009 403 aa18.51■□□□□ 0.55
HMGN3-203ENST00000620514 MTMR12Q9C0I1 747 aa18.51■□□□□ 0.55
HMGN3-203ENST00000620514 MAGEF1Q9HAY2 307 aa18.51■□□□□ 0.55
HMGN3-203ENST00000620514 ZDHHC9Q9Y397 364 aa18.51■□□□□ 0.55
HMGN3-203ENST00000620514 TCHHQ07283 1943 aa18.51■□□□□ 0.55
HMGN3-203ENST00000620514 PTPRJQ12913 1337 aa18.5■□□□□ 0.55
HMGN3-203ENST00000620514 EIF3DO15371 548 aaKnown RBP eCLIP18.5■□□□□ 0.55
HMGN3-203ENST00000620514 TGFB1I1O43294 461 aa18.5■□□□□ 0.55
HMGN3-203ENST00000620514 DCNP07585 359 aaKnown RBP18.5■□□□□ 0.55
HMGN3-203ENST00000620514 PNPLA4P41247 253 aa18.5■□□□□ 0.55
HMGN3-203ENST00000620514 ALDH1A3P47895 512 aa18.5■□□□□ 0.55
HMGN3-203ENST00000620514 BFSP1Q12934 665 aa18.5■□□□□ 0.55
HMGN3-203ENST00000620514 PLD1Q13393 1074 aa18.5■□□□□ 0.55
HMGN3-203ENST00000620514 CUL4BQ13620 913 aa18.5■□□□□ 0.55
HMGN3-203ENST00000620514 SLC44A4Q53GD3 710 aa18.5■□□□□ 0.55
HMGN3-203ENST00000620514 NELFCDQ8IXH7 590 aa18.5■□□□□ 0.55
HMGN3-203ENST00000620514 THEM5Q8N1Q8 247 aa18.5■□□□□ 0.55
HMGN3-203ENST00000620514 CSGALNACT2Q8N6G5 542 aa18.5■□□□□ 0.55
HMGN3-203ENST00000620514 LEMD2Q8NC56 503 aa18.5■□□□□ 0.55
HMGN3-203ENST00000620514 SCFD1Q8WVM8 642 aa18.5■□□□□ 0.55
HMGN3-203ENST00000620514 ELSPBP1Q96BH3 223 aa18.5■□□□□ 0.55
HMGN3-203ENST00000620514 ASB16Q96NS5 453 aa18.5■□□□□ 0.55
HMGN3-203ENST00000620514 IRF2BPLQ9H1B7 796 aa18.5■□□□□ 0.55
HMGN3-203ENST00000620514 ZNF334Q9HCZ1 680 aaPredicted RBP18.5■□□□□ 0.55
HMGN3-203ENST00000620514 HSPBP1Q9NZL4 362 aa18.5■□□□□ 0.55
HMGN3-203ENST00000620514 SERTAD1Q9UHV2 236 aa18.5■□□□□ 0.55
HMGN3-203ENST00000620514 SIX4Q9UIU6 781 aa18.5■□□□□ 0.55
HMGN3-203ENST00000620514 A0A1W2PRU2 124 aa18.49■□□□□ 0.55
HMGN3-203ENST00000620514 KIAA0391O15091 583 aaKnown RBP18.49■□□□□ 0.55
HMGN3-203ENST00000620514 LRRN2O75325 713 aa18.49■□□□□ 0.55
HMGN3-203ENST00000620514 KRT19P08727 400 aa18.49■□□□□ 0.55
HMGN3-203ENST00000620514 VIPR2P41587 438 aa18.49■□□□□ 0.55
HMGN3-203ENST00000620514 STARD6P59095 220 aa18.49■□□□□ 0.55
HMGN3-203ENST00000620514 GRM2Q14416 872 aa18.49■□□□□ 0.55
HMGN3-203ENST00000620514 MLF2Q15773 248 aaPredicted RBP18.49■□□□□ 0.55
HMGN3-203ENST00000620514 DNAJB7Q7Z6W7 309 aaPredicted RBP18.49■□□□□ 0.55
HMGN3-203ENST00000620514 PDCL2Q8N4E4 241 aa18.49■□□□□ 0.55
HMGN3-203ENST00000620514 OR5B17Q8NGF7 314 aa18.49■□□□□ 0.55
HMGN3-203ENST00000620514 SEPT5Q99719 369 aaPredicted RBP18.49■□□□□ 0.55
HMGN3-203ENST00000620514 LPIN3Q9BQK8 851 aa18.49■□□□□ 0.55
HMGN3-203ENST00000620514 ZFP14Q9HCL3 533 aa18.49■□□□□ 0.55
HMGN3-203ENST00000620514 AGPAT3Q9NRZ7 376 aa18.49■□□□□ 0.55
HMGN3-203ENST00000620514 TMLHEQ9NVH6 421 aa18.49■□□□□ 0.55
HMGN3-203ENST00000620514 ITGA11Q9UKX5 1188 aa18.49■□□□□ 0.55
HMGN3-203ENST00000620514 L1RE1Q9UN81 338 aa18.49■□□□□ 0.55
HMGN3-203ENST00000620514 NCANO14594 1321 aa18.49■□□□□ 0.55
HMGN3-203ENST00000620514 ZNF233A6NK53 670 aa18.48■□□□□ 0.55
HMGN3-203ENST00000620514 CLIC2O15247 247 aa18.48■□□□□ 0.55
HMGN3-203ENST00000620514 TMEM191BP0C7N4 346 aa18.48■□□□□ 0.55
HMGN3-203ENST00000620514 RBP5P82980 135 aa18.48■□□□□ 0.55
HMGN3-203ENST00000620514 PFKPQ01813 784 aa18.48■□□□□ 0.55
HMGN3-203ENST00000620514 MGAT5BQ3V5L5 792 aa18.48■□□□□ 0.55
HMGN3-203ENST00000620514 STXBP5Q5T5C0 1151 aa18.48■□□□□ 0.55
HMGN3-203ENST00000620514 LRRC52Q8N7C0 313 aa18.48■□□□□ 0.55
HMGN3-203ENST00000620514 RDH13Q8NBN7 331 aa18.48■□□□□ 0.55
HMGN3-203ENST00000620514 ZSCAN18Q8TBC5 510 aaPredicted RBP18.48■□□□□ 0.55
HMGN3-203ENST00000620514 SMARCD2Q92925 531 aa18.48■□□□□ 0.55
HMGN3-203ENST00000620514 PSMG2Q969U7 264 aa18.48■□□□□ 0.55
HMGN3-203ENST00000620514 SLC39A2Q9NP94 309 aa18.48■□□□□ 0.55
HMGN3-203ENST00000620514 INTS13Q9NVM9 706 aa18.48■□□□□ 0.55
HMGN3-203ENST00000620514 DLGAP2Q9P1A6 1054 aa18.48■□□□□ 0.55
HMGN3-203ENST00000620514 SIT1Q9Y3P8 196 aa18.48■□□□□ 0.55
HMGN3-203ENST00000620514 ACTN4O43707 911 aaKnown RBP18.47■□□□□ 0.55
HMGN3-203ENST00000620514 GLULP15104 373 aa18.47■□□□□ 0.55
HMGN3-203ENST00000620514 ATF6P18850 670 aa18.47■□□□□ 0.55
HMGN3-203ENST00000620514 CD72P21854 359 aa18.47■□□□□ 0.55
HMGN3-203ENST00000620514 ANGPT1Q15389 498 aa18.47■□□□□ 0.55
HMGN3-203ENST00000620514 VITQ6UXI7 678 aa18.47■□□□□ 0.55
HMGN3-203ENST00000620514 GAREM2Q75VX8 874 aa18.47■□□□□ 0.55
HMGN3-203ENST00000620514 OSTM1Q86WC4 334 aa18.47■□□□□ 0.55
HMGN3-203ENST00000620514 GPIHBP1Q8IV16 184 aa18.47■□□□□ 0.55
HMGN3-203ENST00000620514 CEP57L1Q8IYX8 460 aa18.47■□□□□ 0.55
HMGN3-203ENST00000620514 PJA1Q8NG27 643 aa18.47■□□□□ 0.55
HMGN3-203ENST00000620514 GIPC2Q8TF65 315 aa18.47■□□□□ 0.55
HMGN3-203ENST00000620514 LEO1Q8WVC0 666 aaPredicted RBP18.47■□□□□ 0.55
HMGN3-203ENST00000620514 SHDQ96IW2 340 aa18.47■□□□□ 0.55
HMGN3-203ENST00000620514 DDX23Q9BUQ8 820 aaKnown RBP18.47■□□□□ 0.55
HMGN3-203ENST00000620514 SLITRK6Q9H5Y7 841 aa18.47■□□□□ 0.55
HMGN3-203ENST00000620514 ABI2Q9NYB9 513 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms