RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 EAPPQ56P03 285 aaPredicted RBP13.21□□□□□ -0.3
MSH6-213ENST00000614496 TATDN1Q6P1N9 297 aa13.21□□□□□ -0.3
MSH6-213ENST00000614496 SDCCAG8Q86SQ7 713 aaPredicted RBP13.21□□□□□ -0.3
MSH6-213ENST00000614496 EMC1Q8N766 993 aa13.21□□□□□ -0.3
MSH6-213ENST00000614496 FAM111AQ96PZ2 611 aa13.21□□□□□ -0.3
MSH6-213ENST00000614496 FERMT1Q9BQL6 677 aa13.21□□□□□ -0.3
MSH6-213ENST00000614496 ADPGKQ9BRR6 497 aa13.21□□□□□ -0.3
MSH6-213ENST00000614496 ZNF302Q9NR11 478 aa13.21□□□□□ -0.3
MSH6-213ENST00000614496 DONSONQ9NYP3 566 aa13.21□□□□□ -0.3
MSH6-213ENST00000614496 SCOCQ9UIL1 159 aa13.21□□□□□ -0.3
MSH6-213ENST00000614496 UBR2Q8IWV8 1755 aa13.21□□□□□ -0.3
MSH6-213ENST00000614496 F8VP50 259 aa13.21□□□□□ -0.3
MSH6-213ENST00000614496 SAT1P21673 171 aa13.21□□□□□ -0.3
MSH6-213ENST00000614496 YARSP54577 528 aaKnown RBP13.21□□□□□ -0.3
MSH6-213ENST00000614496 NLRP11P59045 1033 aaKnown RBP13.21□□□□□ -0.3
MSH6-213ENST00000614496 PDE1BQ01064 536 aa13.21□□□□□ -0.3
MSH6-213ENST00000614496 TFDP1Q14186 410 aa13.21□□□□□ -0.3
MSH6-213ENST00000614496 EMC2Q15006 297 aa13.21□□□□□ -0.3
MSH6-213ENST00000614496 PIGWQ7Z7B1 504 aa13.21□□□□□ -0.3
MSH6-213ENST00000614496 ARMC2Q8NEN0 867 aa13.21□□□□□ -0.3
MSH6-213ENST00000614496 TSC22D3Q99576 134 aa13.21□□□□□ -0.3
MSH6-213ENST00000614496 GLI3P10071 1580 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 ITGB4P16144 1822 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 MAP3K7O43318 606 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 PRPSAP2O60256 369 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 RBP3P10745 1247 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 ANKRD20A2Q5SQ80 823 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 ANKRD20A1Q5TYW2 823 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 ZC3H3Q8IXZ2 948 aaKnown RBP13.2□□□□□ -0.3
MSH6-213ENST00000614496 C7orf31Q8N865 590 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 CDHR1Q96JP9 859 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 TIPINQ9BVW5 301 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 BATF3Q9NR55 127 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 TOGARAM1Q9Y4F4 1720 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 PSTPIP1O43586 416 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 UPP2O95045 317 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 ADRA1DP25100 572 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 SERPINB6P35237 376 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 RPL7AP62424 266 aaKnown RBP13.2□□□□□ -0.3
MSH6-213ENST00000614496 GTF2BQ00403 316 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 OTUD4Q01804 1114 aaKnown RBP13.2□□□□□ -0.3
MSH6-213ENST00000614496 WDR72Q3MJ13 1102 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 ZNF667Q5HYK9 610 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 EP400NLQ6ZTU2 488 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 C4orf19Q8IY42 314 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 FBXO36Q8NEA4 188 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 FLAD1Q8NFF5 587 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 ACTL9Q8TC94 416 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 TMC2Q8TDI7 906 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 PGM1P36871 562 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 HMGCS2P54868 508 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 MTFR1Q15390 333 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 FAM182AQ5T1J6 154 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 FAM102AQ5T9C2 384 aaPredicted RBP13.2□□□□□ -0.3
MSH6-213ENST00000614496 NAIF1Q69YI7 327 aaPredicted RBP13.2□□□□□ -0.3
MSH6-213ENST00000614496 PCGF5Q86SE9 256 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 EXD1Q8NHP7 514 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 PDCD2LQ9BRP1 358 aa13.2□□□□□ -0.3
MSH6-213ENST00000614496 C12orf65Q9H3J6 166 aaKnown RBP13.2□□□□□ -0.3
MSH6-213ENST00000614496 NOCTQ9UK39 431 aaKnown RBP13.2□□□□□ -0.3
MSH6-213ENST00000614496 MYH14Q7Z406 1995 aaKnown RBP13.2□□□□□ -0.3
MSH6-213ENST00000614496 MGRN1O60291 552 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 KRT37O76014 449 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 EPHB1P54762 984 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 GEMIN4P57678 1058 aaKnown RBP13.19□□□□□ -0.3
MSH6-213ENST00000614496 PTK7Q13308 1070 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 MAP7D3Q8IWC1 876 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 ABRAQ8N0Z2 381 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 TMEM161BQ8NDZ6 487 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 PLEKHO2Q8TD55 490 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 NAF1Q96HR8 494 aaKnown RBP13.19□□□□□ -0.3
MSH6-213ENST00000614496 TSNARE1Q96NA8 513 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 MANSC1Q9H8J5 431 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 RAB6BQ9NRW1 208 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 SPDYE2BA6NHP3 402 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 KRT7P08729 469 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 SPDYE6P0CI01 402 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 POU5F1Q01860 360 aaKnown RBP13.19□□□□□ -0.3
MSH6-213ENST00000614496 LRRC36Q1X8D7 754 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 SPOCD1Q6ZMY3 1216 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 CCDC33Q8N5R6 958 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 DNAJC9Q8WXX5 260 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 KIAA1683Q9H0B3 1180 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 A0A1W2PPM1 405 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 DNALI1O14645 258 aaPredicted RBP13.19□□□□□ -0.3
MSH6-213ENST00000614496 GCLCP48506 637 aaPredicted RBP13.19□□□□□ -0.3
MSH6-213ENST00000614496 GPC3P51654 580 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 RCN1Q15293 331 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 RSBN1LQ6PCB5 846 aaPredicted RBP13.19□□□□□ -0.3
MSH6-213ENST00000614496 ZNF677Q86XU0 584 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 RIBC1Q8N443 379 aaPredicted RBP13.19□□□□□ -0.3
MSH6-213ENST00000614496 TTC13Q8NBP0 860 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 SPATA18Q8TC71 538 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 HELQQ8TDG4 1101 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 ZNF606Q8WXB4 792 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 BORCS6Q96GS4 357 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 PAFAH2Q99487 392 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 MTMR12Q9C0I1 747 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 CYP26B1Q9NR63 512 aa13.19□□□□□ -0.3
MSH6-213ENST00000614496 M0QYV0 167 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms