RNA–Protein interactions for RNA: ENST00000612123.3

PBX1-221, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 6,062 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-221ENST00000612123 SKA2Q8WVK7 121 aaPredicted RBP7.05□□□□□ -1.28
PBX1-221ENST00000612123 HDAC11Q96DB2 347 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 PDCD2LQ9BRP1 358 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 LRRC1Q9BTT6 524 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 SPATC1LQ9H0A9 340 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 PCDHB8Q9UN66 801 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 MTSS1O43312 755 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 TRIM49P0CI25 452 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 TRIM49CP0CI26 452 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 ELAVL2Q12926 359 aaKnown RBP7.05□□□□□ -1.28
PBX1-221ENST00000612123 MKL1Q969V6 931 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 ATP6V1E2Q96A05 226 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 TMEM143Q96AN5 459 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 NKX1-2Q9UD57 310 aaPredicted RBP7.05□□□□□ -1.28
PBX1-221ENST00000612123 ATP8A1Q9Y2Q0 1164 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 TCRBV5S4A2TA0A5A2 114 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 TBC1D12O60347 775 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 PALMO75781 387 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 TMEM154Q6P9G4 183 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 STKLD1Q8NE28 680 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 AKT1S1Q96B36 256 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 ERGIC2Q96RQ1 377 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 HAUS8Q9BT25 410 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 COLEC11Q9BWP8 271 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 ABHD16BQ9H3Z7 469 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 EPS8L2Q9H6S3 715 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 PPCSQ9HAB8 311 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 DPP7Q9UHL4 492 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 DBR1Q9UK59 544 aaKnown RBP7.05□□□□□ -1.28
PBX1-221ENST00000612123 CACNA1FO60840 1977 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 GLI3P10071 1580 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 WNT10BO00744 389 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 TAC1P20366 129 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 TM4SF1P30408 202 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 TCF7P36402 384 aaPredicted RBP7.05□□□□□ -1.28
PBX1-221ENST00000612123 CD300CQ08708 224 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 ATG16L1Q676U5 607 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 CDCA2Q69YH5 1023 aaPredicted RBP7.05□□□□□ -1.28
PBX1-221ENST00000612123 CYP4F22Q6NT55 531 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 LMNTD2Q8IXW0 634 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 UBN1Q9NPG3 1134 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 SNX9Q9Y5X1 595 aa7.05□□□□□ -1.28
PBX1-221ENST00000612123 TOM1L1O75674 476 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 UCHL3P15374 230 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 ALOX15P16050 662 aaPredicted RBP7.04□□□□□ -1.28
PBX1-221ENST00000612123 HERVK_113P62684 666 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 GFPT1Q06210 699 aaPredicted RBP7.04□□□□□ -1.28
PBX1-221ENST00000612123 STK4Q13043 487 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 CDO1Q16878 200 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 EFHC1Q5JVL4 640 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 TAF2Q6P1X5 1199 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 DRAXINQ8NBI3 349 aaPredicted RBP7.04□□□□□ -1.28
PBX1-221ENST00000612123 TMC2Q8TDI7 906 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 KRT35Q92764 455 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 FAF2Q96CS3 445 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 NFU1Q9UMS0 254 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 DDTLA6NHG4 134 aaPredicted RBP7.04□□□□□ -1.28
PBX1-221ENST00000612123 DNAJC6O75061 913 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 CTDNEP1O95476 244 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 ATP6V1G2O95670 118 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 LSP1P33241 339 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 SHMT1P34896 483 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 UBAP2Q5T6F2 1119 aaKnown RBP7.04□□□□□ -1.28
PBX1-221ENST00000612123 NBPF12Q5TAG4 269 aaPredicted RBP7.04□□□□□ -1.28
PBX1-221ENST00000612123 PRR23BQ6ZRT6 265 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 CATSPER3Q86XQ3 398 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 RCOR2Q8IZ40 523 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 FSD1LQ9BXM9 530 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 FRMD8Q9BZ67 464 aaPredicted RBP7.04□□□□□ -1.28
PBX1-221ENST00000612123 FBXO28Q9NVF7 368 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 TJP2Q9UDY2 1190 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 DSEQ9UL01 958 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 POLIQ9UNA4 740 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 RTN3O95197 1032 aaPredicted RBP7.04□□□□□ -1.28
PBX1-221ENST00000612123 SLC2A3P11169 496 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 TAF6P49848 677 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 KYNUQ16719 465 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 TMEM214Q6NUQ4 689 aaKnown RBP7.04□□□□□ -1.28
PBX1-221ENST00000612123 TTC23LQ6PF05 361 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 SYTL5Q8TDW5 730 aaPredicted RBP7.04□□□□□ -1.28
PBX1-221ENST00000612123 TMEM237Q96Q45 408 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 TMEM60Q9H2L4 133 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 MAGED2Q9UNF1 606 aaPredicted RBP7.04□□□□□ -1.28
PBX1-221ENST00000612123 MRC1P22897 1456 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 MSCO60682 206 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 KRT17Q04695 432 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 FMR1Q06787 632 aaKnown RBP eCLIP7.04□□□□□ -1.28
PBX1-221ENST00000612123 ANO4Q32M45 955 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 GLYCTKQ8IVS8 523 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 VGLL2Q8N8G2 317 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.04□□□□□ -1.28
PBX1-221ENST00000612123 HSPH1Q92598 858 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 NMD3Q96D46 503 aaKnown RBP7.04□□□□□ -1.28
PBX1-221ENST00000612123 IFT43Q96FT9 208 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 DDX27Q96GQ7 796 aaKnown RBP7.04□□□□□ -1.28
PBX1-221ENST00000612123 DISP2A7MBM2 1401 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 MYOCOSA0A1B0GUC4 107 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 SERPINB4P48594 390 aa7.04□□□□□ -1.28
PBX1-221ENST00000612123 KPNA1P52294 538 aaPredicted RBP7.04□□□□□ -1.28
PBX1-221ENST00000612123 CRY2Q49AN0 593 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms