RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 ZNF507Q8TCN5 953 aa24.44■■□□□ 1.5
SSBP4-209ENST00000601357 ZSWIM3Q96MP5 696 aa24.44■■□□□ 1.5
SSBP4-209ENST00000601357 DDX23Q9BUQ8 820 aaKnown RBP24.44■■□□□ 1.5
SSBP4-209ENST00000601357 PDE11AQ9HCR9 933 aa24.44■■□□□ 1.5
SSBP4-209ENST00000601357 RCOR1Q9UKL0 485 aa24.44■■□□□ 1.5
SSBP4-209ENST00000601357 CFAP45Q9UL16 551 aa24.44■■□□□ 1.5
SSBP4-209ENST00000601357 ITGB3P05106 788 aa24.43■■□□□ 1.5
SSBP4-209ENST00000601357 MYL4P12829 197 aa24.43■■□□□ 1.5
SSBP4-209ENST00000601357 POLR2BP30876 1174 aaKnown RBP24.43■■□□□ 1.5
SSBP4-209ENST00000601357 ALDH1A3P47895 512 aa24.43■■□□□ 1.5
SSBP4-209ENST00000601357 EPHB3P54753 998 aa24.43■■□□□ 1.5
SSBP4-209ENST00000601357 PFKPQ01813 784 aa24.43■■□□□ 1.5
SSBP4-209ENST00000601357 SNW1Q13573 536 aaKnown RBP24.43■■□□□ 1.5
SSBP4-209ENST00000601357 SLC39A12Q504Y0 691 aa24.43■■□□□ 1.5
SSBP4-209ENST00000601357 SCARA3Q6AZY7 606 aa24.43■■□□□ 1.5
SSBP4-209ENST00000601357 SHKBP1Q8TBC3 707 aa24.43■■□□□ 1.5
SSBP4-209ENST00000601357 CACTINQ8WUQ7 758 aaKnown RBP24.43■■□□□ 1.5
SSBP4-209ENST00000601357 SHDQ96IW2 340 aa24.43■■□□□ 1.5
SSBP4-209ENST00000601357 ITGA11Q9UKX5 1188 aa24.43■■□□□ 1.5
SSBP4-209ENST00000601357 SIT1Q9Y3P8 196 aa24.43■■□□□ 1.5
SSBP4-209ENST00000601357 ASB3Q9Y575 518 aa24.43■■□□□ 1.5
SSBP4-209ENST00000601357 COL4A2P08572 1712 aa24.43■■□□□ 1.5
SSBP4-209ENST00000601357 PROB1E7EW31 1015 aa24.42■■□□□ 1.5
SSBP4-209ENST00000601357 GJA1P17302 382 aa24.42■■□□□ 1.5
SSBP4-209ENST00000601357 RFX1P22670 979 aa24.42■■□□□ 1.5
SSBP4-209ENST00000601357 PRKCQQ04759 706 aa24.42■■□□□ 1.5
SSBP4-209ENST00000601357 MLF2Q15773 248 aaPredicted RBP24.42■■□□□ 1.5
SSBP4-209ENST00000601357 SLC44A4Q53GD3 710 aa24.42■■□□□ 1.5
SSBP4-209ENST00000601357 FAM26FQ5R3K3 315 aa24.42■■□□□ 1.5
SSBP4-209ENST00000601357 UNC13DQ70J99 1090 aa24.42■■□□□ 1.5
SSBP4-209ENST00000601357 LRRTM3Q86VH5 581 aa24.42■■□□□ 1.5
SSBP4-209ENST00000601357 THEM5Q8N1Q8 247 aa24.42■■□□□ 1.5
SSBP4-209ENST00000601357 LRRC52Q8N7C0 313 aa24.42■■□□□ 1.5
SSBP4-209ENST00000601357 PJA1Q8NG27 643 aa24.42■■□□□ 1.5
SSBP4-209ENST00000601357 SMARCD2Q92925 531 aa24.42■■□□□ 1.5
SSBP4-209ENST00000601357 FAM84AQ96KN4 292 aa24.42■■□□□ 1.5
SSBP4-209ENST00000601357 TRPV4Q9HBA0 871 aa24.42■■□□□ 1.5
SSBP4-209ENST00000601357 ZFP14Q9HCL3 533 aa24.42■■□□□ 1.5
SSBP4-209ENST00000601357 FAM13BQ9NYF5 915 aa24.42■■□□□ 1.5
SSBP4-209ENST00000601357 AGAP1Q9UPQ3 857 aa24.42■■□□□ 1.5
SSBP4-209ENST00000601357 SOAT2O75908 522 aa24.41■■□□□ 1.5
SSBP4-209ENST00000601357 NBL1P41271 181 aa24.41■■□□□ 1.5
SSBP4-209ENST00000601357 C2orf15Q8WU43 125 aaKnown RBP24.41■■□□□ 1.5
SSBP4-209ENST00000601357 PSMG2Q969U7 264 aa24.41■■□□□ 1.5
SSBP4-209ENST00000601357 FOXQ1Q9C009 403 aa24.41■■□□□ 1.5
SSBP4-209ENST00000601357 HSPBP1Q9NZL4 362 aa24.41■■□□□ 1.5
SSBP4-209ENST00000601357 SIX4Q9UIU6 781 aa24.41■■□□□ 1.5
SSBP4-209ENST00000601357 MIA3Q5JRA6 1907 aa24.41■■□□□ 1.5
SSBP4-209ENST00000601357 UBE4BO95155 1302 aa24.4■■□□□ 1.5
SSBP4-209ENST00000601357 PTPRJQ12913 1337 aa24.4■■□□□ 1.5
SSBP4-209ENST00000601357 KANSL1LA0AUZ9 987 aa24.4■■□□□ 1.5
SSBP4-209ENST00000601357 TGFB1I1O43294 461 aa24.4■■□□□ 1.5
SSBP4-209ENST00000601357 DCNP07585 359 aaKnown RBP24.4■■□□□ 1.5
SSBP4-209ENST00000601357 CASP1P29466 404 aa24.4■■□□□ 1.5
SSBP4-209ENST00000601357 SMARCB1Q12824 385 aa24.4■■□□□ 1.5
SSBP4-209ENST00000601357 ANGPT1Q15389 498 aa24.4■■□□□ 1.5
SSBP4-209ENST00000601357 TEAD2Q15562 447 aa24.4■■□□□ 1.5
SSBP4-209ENST00000601357 DNAJB7Q7Z6W7 309 aaPredicted RBP24.4■■□□□ 1.5
SSBP4-209ENST00000601357 CBWD2Q8IUF1 395 aa24.4■■□□□ 1.5
SSBP4-209ENST00000601357 PDCL2Q8N4E4 241 aa24.4■■□□□ 1.5
SSBP4-209ENST00000601357 CSGALNACT2Q8N6G5 542 aa24.4■■□□□ 1.5
SSBP4-209ENST00000601357 SCFD1Q8WVM8 642 aa24.4■■□□□ 1.5
SSBP4-209ENST00000601357 MTMR12Q9C0I1 747 aa24.4■■□□□ 1.5
SSBP4-209ENST00000601357 GPR88Q9GZN0 384 aa24.4■■□□□ 1.5
SSBP4-209ENST00000601357 BLZF1Q9H2G9 400 aa24.4■■□□□ 1.5
SSBP4-209ENST00000601357 ZNF334Q9HCZ1 680 aaPredicted RBP24.4■■□□□ 1.5
SSBP4-209ENST00000601357 GDAP2Q9NXN4 497 aa24.4■■□□□ 1.5
SSBP4-209ENST00000601357 L1RE1Q9UN81 338 aa24.4■■□□□ 1.5
SSBP4-209ENST00000601357 PVALEFA0A1B0GWK0 134 aa24.39■■□□□ 1.49
SSBP4-209ENST00000601357 A0A1W2PRU2 124 aa24.39■■□□□ 1.49
SSBP4-209ENST00000601357 ZNF233A6NK53 670 aa24.39■■□□□ 1.49
SSBP4-209ENST00000601357 GLULP15104 373 aa24.39■■□□□ 1.49
SSBP4-209ENST00000601357 ATF6P18850 670 aa24.39■■□□□ 1.49
SSBP4-209ENST00000601357 TUFMP49411 452 aaKnown RBP24.39■■□□□ 1.49
SSBP4-209ENST00000601357 VITQ6UXI7 678 aa24.39■■□□□ 1.49
SSBP4-209ENST00000601357 GAREM2Q75VX8 874 aa24.39■■□□□ 1.49
SSBP4-209ENST00000601357 ZSCAN18Q8TBC5 510 aaPredicted RBP24.39■■□□□ 1.49
SSBP4-209ENST00000601357 SPPL2BQ8TCT7 592 aa24.39■■□□□ 1.49
SSBP4-209ENST00000601357 NOC3LQ8WTT2 800 aaKnown RBP24.39■■□□□ 1.49
SSBP4-209ENST00000601357 DNASE1L2Q92874 299 aa24.39■■□□□ 1.49
SSBP4-209ENST00000601357 KIAA1586Q9HCI6 787 aa24.39■■□□□ 1.49
SSBP4-209ENST00000601357 AGPAT3Q9NRZ7 376 aa24.39■■□□□ 1.49
SSBP4-209ENST00000601357 INTS13Q9NVM9 706 aa24.39■■□□□ 1.49
SSBP4-209ENST00000601357 ZDHHC9Q9Y397 364 aa24.39■■□□□ 1.49
SSBP4-209ENST00000601357 NCANO14594 1321 aa24.38■■□□□ 1.49
SSBP4-209ENST00000601357 RBP5P82980 135 aa24.38■■□□□ 1.49
SSBP4-209ENST00000601357 CUL4BQ13620 913 aa24.38■■□□□ 1.49
SSBP4-209ENST00000601357 GRM2Q14416 872 aa24.38■■□□□ 1.49
SSBP4-209ENST00000601357 OR5B17Q8NGF7 314 aa24.38■■□□□ 1.49
SSBP4-209ENST00000601357 MKNK1Q9BUB5 465 aa24.38■■□□□ 1.49
SSBP4-209ENST00000601357 NUP210Q8TEM1 1887 aaPredicted RBP24.37■■□□□ 1.49
SSBP4-209ENST00000601357 SHISA7A6NL88 538 aa24.37■■□□□ 1.49
SSBP4-209ENST00000601357 TMEM191BP0C7N4 346 aa24.37■■□□□ 1.49
SSBP4-209ENST00000601357 SLFN14P0C7P3 912 aa24.37■■□□□ 1.49
SSBP4-209ENST00000601357 HAPLN1P10915 354 aaPredicted RBP24.37■■□□□ 1.49
SSBP4-209ENST00000601357 VIPR2P41587 438 aa24.37■■□□□ 1.49
SSBP4-209ENST00000601357 CDR1P51861 262 aa24.37■■□□□ 1.49
SSBP4-209ENST00000601357 SNRPFP62306 86 aaKnown RBP24.37■■□□□ 1.49
SSBP4-209ENST00000601357 SURF1Q15526 300 aa24.37■■□□□ 1.49
SSBP4-209ENST00000601357 BMT2Q1RMZ1 405 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms