RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 SAFBQ15424 915 aaKnown RBP eCLIP6.65□□□□□ -1.34
VRK3-220ENST00000600259 ENOX2Q16206 610 aaKnown RBP6.65□□□□□ -1.34
VRK3-220ENST00000600259 TMEM196Q5HYL7 178 aa6.65□□□□□ -1.34
VRK3-220ENST00000600259 GPR158Q5T848 1215 aa6.65□□□□□ -1.34
VRK3-220ENST00000600259 SPATA1Q5VX52 437 aa6.65□□□□□ -1.34
VRK3-220ENST00000600259 FSTL4Q6MZW2 842 aa6.65□□□□□ -1.34
VRK3-220ENST00000600259 KBTBD6Q86V97 674 aa6.65□□□□□ -1.34
VRK3-220ENST00000600259 LRRTM3Q86VH5 581 aa6.65□□□□□ -1.34
VRK3-220ENST00000600259 YAF2Q8IY57 180 aa6.65□□□□□ -1.34
VRK3-220ENST00000600259 PIP4P2Q8N4L2 257 aa6.65□□□□□ -1.34
VRK3-220ENST00000600259 SYT2Q8N9I0 419 aaPredicted RBP6.65□□□□□ -1.34
VRK3-220ENST00000600259 OR10T2Q8NGX3 314 aa6.65□□□□□ -1.34
VRK3-220ENST00000600259 RIN3Q8TB24 985 aa6.65□□□□□ -1.34
VRK3-220ENST00000600259 SNX29Q8TEQ0 813 aa6.65□□□□□ -1.34
VRK3-220ENST00000600259 LRRC15Q8TF66 581 aa6.65□□□□□ -1.34
VRK3-220ENST00000600259 GAB3Q8WWW8 586 aa6.65□□□□□ -1.34
VRK3-220ENST00000600259 LOXL4Q96JB6 756 aa6.65□□□□□ -1.34
VRK3-220ENST00000600259 C8orf76Q96K31 380 aa6.65□□□□□ -1.34
VRK3-220ENST00000600259 ZC3H10Q96K80 434 aaKnown RBP6.65□□□□□ -1.34
VRK3-220ENST00000600259 SENP8Q96LD8 212 aa6.65□□□□□ -1.34
VRK3-220ENST00000600259 DRC1Q96MC2 740 aa6.65□□□□□ -1.34
VRK3-220ENST00000600259 LLPHQ9BRT6 129 aaKnown RBP6.65□□□□□ -1.34
VRK3-220ENST00000600259 TIPINQ9BVW5 301 aa6.65□□□□□ -1.34
VRK3-220ENST00000600259 LSM14BQ9BX40 385 aaKnown RBP6.65□□□□□ -1.34
VRK3-220ENST00000600259 ARRDC1-AS1Q9H2J1 176 aa6.65□□□□□ -1.34
VRK3-220ENST00000600259 ATXN3LQ9H3M9 355 aa6.65□□□□□ -1.34
VRK3-220ENST00000600259 TASP1Q9H6P5 420 aa6.65□□□□□ -1.34
VRK3-220ENST00000600259 HPS4Q9NQG7 708 aa6.65□□□□□ -1.34
VRK3-220ENST00000600259 GKN1Q9NS71 199 aa6.65□□□□□ -1.34
VRK3-220ENST00000600259 UBQLN1Q9UMX0 589 aaKnown RBP6.65□□□□□ -1.34
VRK3-220ENST00000600259 WASF3Q9UPY6 502 aa6.65□□□□□ -1.34
VRK3-220ENST00000600259 TICRRQ7Z2Z1 1910 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 LAMA1P25391 3075 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 A0A0B4J269 797 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 NPHP3-ACAD11A0A0J9YXS1 232 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 TRDMT1O14717 391 aaKnown RBP6.64□□□□□ -1.35
VRK3-220ENST00000600259 SEC24BO95487 1268 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 PIGRP01833 764 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 HMGA1P17096 107 aaKnown RBP6.64□□□□□ -1.35
VRK3-220ENST00000600259 ATF6P18850 670 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 PRPHP41219 470 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 ALDH1A3P47895 512 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 PXNP49023 591 aaPredicted RBP6.64□□□□□ -1.35
VRK3-220ENST00000600259 SLC12A3P55017 1021 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 NCKAP1LP55160 1127 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 CYP4F8P98187 520 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 PLD1Q13393 1074 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 CCDC6Q16204 474 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 ITPRIPL2Q3MIP1 535 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 PLK5Q496M5 336 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 STPG1Q5TH74 334 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 OVOS1Q6IE37 1185 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 SLC39A4Q6P5W5 647 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.64□□□□□ -1.35
VRK3-220ENST00000600259 CCDC83Q8IWF9 413 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 BPIFB1Q8TDL5 484 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 DDX1Q92499 740 aaKnown RBP6.64□□□□□ -1.35
VRK3-220ENST00000600259 EZH1Q92800 747 aaPredicted RBP6.64□□□□□ -1.35
VRK3-220ENST00000600259 KIF12Q96FN5 646 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 TSPAN18Q96SJ8 248 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 FIZ1Q96SL8 496 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 LPIN3Q9BQK8 851 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 ZCWPW1Q9H0M4 648 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 SMOC1Q9H4F8 434 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 SLITRK6Q9H5Y7 841 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.64□□□□□ -1.35
VRK3-220ENST00000600259 LIMCH1Q9UPQ0 1083 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 STK24Q9Y6E0 443 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 FAM208BQ5VWN6 2430 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 IGF2RP11717 2491 aa6.64□□□□□ -1.35
VRK3-220ENST00000600259 OGTO15294 1046 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 AKAP3O75969 853 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 KCNK5O95279 499 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 FGF19O95750 216 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 HAPLN1P10915 354 aaPredicted RBP6.63□□□□□ -1.35
VRK3-220ENST00000600259 PAX3P23760 479 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 TUFMP49411 452 aaKnown RBP6.63□□□□□ -1.35
VRK3-220ENST00000600259 MCM2P49736 904 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 GALK1P51570 392 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 CDR1P51861 262 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 ZNF131P52739 623 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 PLCB2Q00722 1185 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 RAD51AP2Q09MP3 1159 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 STRN3Q13033 797 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 RUNX3Q13761 415 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 TMEM119Q4V9L6 283 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 C9orf57Q5W0N0 161 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 KRT79Q5XKE5 535 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 NAIF1Q69YI7 327 aaPredicted RBP6.63□□□□□ -1.35
VRK3-220ENST00000600259 JADE1Q6IE81 842 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 DSTYKQ6XUX3 929 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 CEP68Q76N32 757 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 CACNA2D4Q7Z3S7 1137 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 HAUS6Q7Z4H7 955 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 USP37Q86T82 979 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 CMTM8Q8IZV2 173 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 KCTD17Q8N5Z5 321 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 USP13Q92995 863 aaPredicted RBP6.63□□□□□ -1.35
VRK3-220ENST00000600259 CHAMP1Q96JM3 812 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 KIF2CQ99661 725 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms