RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 GRASPQ7Z6J2 395 aaPredicted RBP12.39□□□□□ -0.43
VMP1-211ENST00000591315 FAM186BQ8IYM0 893 aa12.39□□□□□ -0.43
VMP1-211ENST00000591315 HDAC7Q8WUI4 952 aa12.39□□□□□ -0.43
VMP1-211ENST00000591315 KBTBD7Q8WVZ9 684 aa12.39□□□□□ -0.43
VMP1-211ENST00000591315 RIPOR3Q96MK2 946 aa12.39□□□□□ -0.43
VMP1-211ENST00000591315 DUSP9Q99956 384 aaKnown RBP12.39□□□□□ -0.43
VMP1-211ENST00000591315 LPIN3Q9BQK8 851 aa12.39□□□□□ -0.43
VMP1-211ENST00000591315 XYLT2Q9H1B5 865 aa12.39□□□□□ -0.43
VMP1-211ENST00000591315 CLSTN2Q9H4D0 955 aa12.39□□□□□ -0.43
VMP1-211ENST00000591315 MMRN2Q9H8L6 949 aa12.39□□□□□ -0.43
VMP1-211ENST00000591315 CYP4F11Q9HBI6 524 aa12.39□□□□□ -0.43
VMP1-211ENST00000591315 GDAP2Q9NXN4 497 aa12.39□□□□□ -0.43
VMP1-211ENST00000591315 PRKAG3Q9UGI9 489 aa12.39□□□□□ -0.43
VMP1-211ENST00000591315 CTNND2Q9UQB3 1225 aa12.39□□□□□ -0.43
VMP1-211ENST00000591315 OR6C75A6NL08 312 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 PRRG1O14668 218 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 ATP2C2O75185 946 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 PAPLNO95428 1278 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 C1RP00736 705 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 ATF2P15336 505 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 CCNE1P24864 410 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 LMO2P25791 158 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 PNPLA4P41247 253 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 GCLMP48507 274 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 VAMP7P51809 220 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 DUSP4Q13115 394 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 BIRC3Q13489 604 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 EDRF1Q3B7T1 1238 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 SLC39A12Q504Y0 691 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 SPOPLQ6IQ16 392 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 POTEHQ6S545 545 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 SV2AQ7L0J3 742 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 LIMS2Q7Z4I7 341 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 METTL23Q86XA0 190 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 RNF135Q8IUD6 432 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 ZC3H3Q8IXZ2 948 aaKnown RBP12.38□□□□□ -0.43
VMP1-211ENST00000591315 TCEAL8Q8IYN2 117 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 HS6ST3Q8IZP7 471 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 TMC2Q8TDI7 906 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 NELFBQ8WX92 580 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 MED15Q96RN5 788 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 MYADMQ96S97 322 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 MRPL45Q9BRJ2 306 aaKnown RBP12.38□□□□□ -0.43
VMP1-211ENST00000591315 PI4K2AQ9BTU6 479 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 ZCWPW1Q9H0M4 648 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 EPHX3Q9H6B9 360 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 PIDD1Q9HB75 910 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 ZDHHC7Q9NXF8 308 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 KIAA1468Q9P260 1216 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 AFF4Q9UHB7 1163 aaKnown RBP12.38□□□□□ -0.43
VMP1-211ENST00000591315 FRMD4BQ9Y2L6 1034 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 INSL5Q9Y5Q6 135 aa12.38□□□□□ -0.43
VMP1-211ENST00000591315 MTMR11A4FU01 709 aa12.37□□□□□ -0.43
VMP1-211ENST00000591315 CETN3O15182 167 aa12.37□□□□□ -0.43
VMP1-211ENST00000591315 HUS1O60921 280 aa12.37□□□□□ -0.43
VMP1-211ENST00000591315 PHACTR2O75167 634 aa12.37□□□□□ -0.43
VMP1-211ENST00000591315 HLA-DRAP01903 254 aa12.37□□□□□ -0.43
VMP1-211ENST00000591315 PDGFRBP09619 1106 aa12.37□□□□□ -0.43
VMP1-211ENST00000591315 RPL13P26373 211 aaKnown RBP12.37□□□□□ -0.43
VMP1-211ENST00000591315 ELF1P32519 619 aa12.37□□□□□ -0.43
VMP1-211ENST00000591315 PSMC2P35998 433 aaKnown RBP12.37□□□□□ -0.43
VMP1-211ENST00000591315 RAP1GAPP47736 663 aa12.37□□□□□ -0.43
VMP1-211ENST00000591315 CDH8P55286 799 aa12.37□□□□□ -0.43
VMP1-211ENST00000591315 GPR17Q13304 367 aa12.37□□□□□ -0.43
VMP1-211ENST00000591315 TRPC3Q13507 836 aa12.37□□□□□ -0.43
VMP1-211ENST00000591315 NCOA4Q13772 614 aa12.37□□□□□ -0.43
VMP1-211ENST00000591315 ZACNQ401N2 412 aa12.37□□□□□ -0.43
VMP1-211ENST00000591315 TPGS2Q68CL5 300 aa12.37□□□□□ -0.43
VMP1-211ENST00000591315 TTI2Q6NXR4 508 aa12.37□□□□□ -0.43
VMP1-211ENST00000591315 SCARA5Q6ZMJ2 495 aa12.37□□□□□ -0.43
VMP1-211ENST00000591315 C15orf39Q6ZRI6 1047 aa12.37□□□□□ -0.43
VMP1-211ENST00000591315 ADGRF2Q8IZF7 708 aa12.37□□□□□ -0.43
VMP1-211ENST00000591315 STKLD1Q8NE28 680 aa12.37□□□□□ -0.43
VMP1-211ENST00000591315 ITFG1Q8TB96 612 aa12.37□□□□□ -0.43
VMP1-211ENST00000591315 NECTIN4Q96NY8 510 aa12.37□□□□□ -0.43
VMP1-211ENST00000591315 SDCBP2Q9H190 292 aa12.37□□□□□ -0.43
VMP1-211ENST00000591315 SMOC2Q9H3U7 446 aa12.37□□□□□ -0.43
VMP1-211ENST00000591315 SMYD3Q9H7B4 428 aa12.37□□□□□ -0.43
VMP1-211ENST00000591315 WDR6Q9NNW5 1121 aaKnown RBP12.37□□□□□ -0.43
VMP1-211ENST00000591315 DDX43Q9NXZ2 648 aaKnown RBP12.37□□□□□ -0.43
VMP1-211ENST00000591315 CEP72Q9P209 647 aa12.37□□□□□ -0.43
VMP1-211ENST00000591315 DNMT3BQ9UBC3 853 aaKnown RBP12.37□□□□□ -0.43
VMP1-211ENST00000591315 NXF1Q9UBU9 619 aaKnown RBP12.37□□□□□ -0.43
VMP1-211ENST00000591315 MUTYHQ9UIF7 546 aa12.37□□□□□ -0.43
VMP1-211ENST00000591315 DSEQ9UL01 958 aa12.37□□□□□ -0.43
VMP1-211ENST00000591315 CLUHO75153 1309 aa12.37□□□□□ -0.43
VMP1-211ENST00000591315 TECTAO75443 2155 aa12.36□□□□□ -0.43
VMP1-211ENST00000591315 ARHGEF37A1IGU5 675 aa12.36□□□□□ -0.43
VMP1-211ENST00000591315 MYBPHLA2RUH7 354 aa12.36□□□□□ -0.43
VMP1-211ENST00000591315 GABRDO14764 452 aa12.36□□□□□ -0.43
VMP1-211ENST00000591315 PSMA7O14818 248 aa12.36□□□□□ -0.43
VMP1-211ENST00000591315 ASGR2P07307 311 aa12.36□□□□□ -0.43
VMP1-211ENST00000591315 HNRNPA1P09651 372 aaKnown RBP eCLIP12.36□□□□□ -0.43
VMP1-211ENST00000591315 PAX3P23760 479 aa12.36□□□□□ -0.43
VMP1-211ENST00000591315 GPR15P49685 360 aa12.36□□□□□ -0.43
VMP1-211ENST00000591315 PSMC1P62191 440 aaKnown RBP12.36□□□□□ -0.43
VMP1-211ENST00000591315 TWF1Q12792 350 aa12.36□□□□□ -0.43
VMP1-211ENST00000591315 MYO1EQ12965 1108 aa12.36□□□□□ -0.43
VMP1-211ENST00000591315 SLC5A9Q2M3M2 681 aa12.36□□□□□ -0.43
VMP1-211ENST00000591315 UVSSAQ2YD98 709 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms