RNA–Protein interactions for RNA: ENST00000589286.1

HMGN1P30-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 30, humanhuman

BASIC

Gene HMGN1P30, Length 268 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P30-201ENST00000589286 MPP3Q13368 585 aa4.48□□□□□ -1.69
HMGN1P30-201ENST00000589286 HLXQ14774 488 aaPredicted RBP4.48□□□□□ -1.69
HMGN1P30-201ENST00000589286 ERCC6LQ2NKX8 1250 aa4.48□□□□□ -1.69
HMGN1P30-201ENST00000589286 CD300EQ496F6 205 aaPredicted RBP4.48□□□□□ -1.69
HMGN1P30-201ENST00000589286 CRB2Q5IJ48 1285 aa4.48□□□□□ -1.69
HMGN1P30-201ENST00000589286 PPP4R4Q6NUP7 873 aa4.48□□□□□ -1.69
HMGN1P30-201ENST00000589286 SLC30A10Q6XR72 485 aa4.48□□□□□ -1.69
HMGN1P30-201ENST00000589286 MICALCLQ6ZW33 695 aa4.48□□□□□ -1.69
HMGN1P30-201ENST00000589286 SLC44A3Q8N4M1 653 aa4.48□□□□□ -1.69
HMGN1P30-201ENST00000589286 Q8NA96 180 aa4.48□□□□□ -1.69
HMGN1P30-201ENST00000589286 BEND2Q8NDZ0 799 aa4.48□□□□□ -1.69
HMGN1P30-201ENST00000589286 PPP1R35Q8TAP8 253 aa4.48□□□□□ -1.69
HMGN1P30-201ENST00000589286 SLC9A6Q92581 669 aa4.48□□□□□ -1.69
HMGN1P30-201ENST00000589286 RUNDC1Q96C34 613 aa4.48□□□□□ -1.69
HMGN1P30-201ENST00000589286 VKORC1Q9BQB6 163 aa4.48□□□□□ -1.69
HMGN1P30-201ENST00000589286 KRTAP4-11Q9BYQ6 195 aa4.48□□□□□ -1.69
HMGN1P30-201ENST00000589286 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.48□□□□□ -1.69
HMGN1P30-201ENST00000589286 COL4A3Q01955 1670 aa4.48□□□□□ -1.69
HMGN1P30-201ENST00000589286 GRID2IPA4D2P6 1211 aa4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 FAM227AF5H4B4 570 aa4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 M0QYG6 137 aa4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 MYO1CO00159 1063 aa4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 PRPF3O43395 683 aaKnown RBP4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 TRIAP1O43715 76 aa4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 PEX1O43933 1283 aa4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 VPS4BO75351 444 aa4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 TUSC2O75896 110 aa4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 SUN1O94901 812 aa4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 ZFPL1O95159 310 aa4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 KIF20AO95235 890 aa4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 MYBP10242 640 aa4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 ITGALP20701 1170 aa4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 PURAQ00577 322 aaKnown RBP4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 SATB1Q01826 763 aa4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 FAM160B1Q5W0V3 765 aa4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 Q6ZNX1 250 aa4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 Q6ZPA2 131 aa4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 WDR75Q8IWA0 830 aaKnown RBP4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 ADGRG5Q8IZF4 528 aa4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 LNX2Q8N448 690 aa4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 PSD4Q8NDX1 1056 aa4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 POC1BQ8TC44 478 aa4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 SSH3Q8TE77 659 aa4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 MOGAT1Q96PD6 335 aa4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 AIFM2Q9BRQ8 373 aa4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 TMEM60Q9H2L4 133 aa4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 SYBUQ9NX95 663 aa4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 LRIT1Q9P2V4 623 aa4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 STAP2Q9UGK3 403 aa4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 PLEKHM1Q9Y4G2 1056 aa4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 RAD54BQ9Y620 910 aa4.47□□□□□ -1.69
HMGN1P30-201ENST00000589286 MAST3O60307 1309 aa4.46□□□□□ -1.69
HMGN1P30-201ENST00000589286 SPATA31A3Q5VYP0 1347 aa4.46□□□□□ -1.69
HMGN1P30-201ENST00000589286 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 A0A0B4J269 797 aa4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 CAPN8A6NHC0 703 aa4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 F5H697 171 aa4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 PHGDHO43175 533 aaKnown RBP4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 ORC4O43929 436 aa4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 ESRRBO95718 433 aa4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 THP07101 528 aa4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 PIM1P11309 404 aaPredicted RBP4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 ATF3P18847 181 aa4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 HDCP19113 662 aa4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 NPTX2P47972 431 aa4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 AGFG1P52594 562 aaKnown RBP4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 SEC24CP53992 1094 aa4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 SCAPQ12770 1279 aa4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 TUBB3Q13509 450 aa4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 SF3B3Q15393 1217 aaKnown RBP4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 LAYNQ6UX15 382 aa4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 NPNTQ6UXI9 565 aa4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 OVCH2Q7RTZ1 564 aa4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 FMNL3Q8IVF7 1028 aa4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 B3GALNT2Q8NCR0 500 aa4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 FAM46DQ8NEK8 389 aa4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 PLBD2Q8NHP8 589 aa4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 LINC00476Q8WZB0 136 aa4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 HEPHQ9BQS7 1158 aa4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 LRFN3Q9BTN0 628 aa4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 B3GNT5Q9BYG0 378 aa4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 IKZF4Q9H2S9 585 aa4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 KCTD5Q9NXV2 234 aa4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 ETAA1Q9NY74 926 aa4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 DMRT1Q9Y5R6 373 aa4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 EPN1Q9Y6I3 576 aaPredicted RBP4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.46□□□□□ -1.7
HMGN1P30-201ENST00000589286 VSTM5A8MXK1 200 aa4.45□□□□□ -1.7
HMGN1P30-201ENST00000589286 YY2O15391 372 aa4.45□□□□□ -1.7
HMGN1P30-201ENST00000589286 UNC5CO95185 931 aa4.45□□□□□ -1.7
HMGN1P30-201ENST00000589286 GRPP07492 148 aa4.45□□□□□ -1.7
HMGN1P30-201ENST00000589286 SRGNP10124 158 aa4.45□□□□□ -1.7
HMGN1P30-201ENST00000589286 CHRM3P20309 590 aa4.45□□□□□ -1.7
HMGN1P30-201ENST00000589286 GATA3P23771 443 aa4.45□□□□□ -1.7
HMGN1P30-201ENST00000589286 NDUFV1P49821 464 aa4.45□□□□□ -1.7
HMGN1P30-201ENST00000589286 CACNB3P54284 484 aa4.45□□□□□ -1.7
HMGN1P30-201ENST00000589286 MRPS35P82673 323 aaKnown RBP4.45□□□□□ -1.7
HMGN1P30-201ENST00000589286 MC2RQ01718 297 aa4.45□□□□□ -1.7
HMGN1P30-201ENST00000589286 ITIH3Q06033 890 aa4.45□□□□□ -1.7
HMGN1P30-201ENST00000589286 TCF15Q12870 199 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms