RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 DSEQ9UL01 958 aa18.1■□□□□ 0.49
HMG20B-215ENST00000585741 CAPN11Q9UMQ6 739 aa18.1■□□□□ 0.49
HMG20B-215ENST00000585741 PCDHB4Q9Y5E5 795 aa18.1■□□□□ 0.49
HMG20B-215ENST00000585741 PDCD11Q14690 1871 aaKnown RBP18.09■□□□□ 0.49
HMG20B-215ENST00000585741 SF3B1O75533 1304 aaKnown RBP eCLIP18.09■□□□□ 0.49
HMG20B-215ENST00000585741 NOL4O94818 638 aa18.09■□□□□ 0.49
HMG20B-215ENST00000585741 CD58P19256 250 aa18.09■□□□□ 0.49
HMG20B-215ENST00000585741 KRT9P35527 623 aa18.09■□□□□ 0.49
HMG20B-215ENST00000585741 BRCC3P46736 316 aa18.09■□□□□ 0.49
HMG20B-215ENST00000585741 GSDMDP57764 484 aa18.09■□□□□ 0.49
HMG20B-215ENST00000585741 ERVK-21P61565 698 aa18.09■□□□□ 0.49
HMG20B-215ENST00000585741 ZBED6P86452 979 aa18.09■□□□□ 0.49
HMG20B-215ENST00000585741 DRAP1Q14919 205 aaPredicted RBP18.09■□□□□ 0.49
HMG20B-215ENST00000585741 SCARA3Q6AZY7 606 aa18.09■□□□□ 0.49
HMG20B-215ENST00000585741 DPH6Q7L8W6 267 aa18.09■□□□□ 0.49
HMG20B-215ENST00000585741 TOP6BLQ8N6T0 577 aa18.09■□□□□ 0.49
HMG20B-215ENST00000585741 COLGALT1Q8NBJ5 622 aa18.09■□□□□ 0.49
HMG20B-215ENST00000585741 KHSRPQ92945 711 aaKnown RBP eCLIP18.09■□□□□ 0.49
HMG20B-215ENST00000585741 HLA-CQ95604 372 aa18.09■□□□□ 0.49
HMG20B-215ENST00000585741 JAKMIP2Q96AA8 810 aa18.09■□□□□ 0.49
HMG20B-215ENST00000585741 EPHX3Q9H6B9 360 aa18.09■□□□□ 0.49
HMG20B-215ENST00000585741 SPG21Q9NZD8 308 aa18.09■□□□□ 0.49
HMG20B-215ENST00000585741 LMCD1Q9NZU5 365 aa18.09■□□□□ 0.49
HMG20B-215ENST00000585741 LINC01553A4QN01 128 aa18.08■□□□□ 0.48
HMG20B-215ENST00000585741 EPHB6O15197 1021 aa18.08■□□□□ 0.48
HMG20B-215ENST00000585741 SPTLC1O15269 473 aa18.08■□□□□ 0.48
HMG20B-215ENST00000585741 NRDCO43847 1150 aa18.08■□□□□ 0.48
HMG20B-215ENST00000585741 B4GALT3O60512 393 aa18.08■□□□□ 0.48
HMG20B-215ENST00000585741 GYPCP04921 128 aa18.08■□□□□ 0.48
HMG20B-215ENST00000585741 WEE2P0C1S8 567 aa18.08■□□□□ 0.48
HMG20B-215ENST00000585741 PBX3P40426 434 aa18.08■□□□□ 0.48
HMG20B-215ENST00000585741 ASPAP45381 313 aa18.08■□□□□ 0.48
HMG20B-215ENST00000585741 KRT17Q04695 432 aa18.08■□□□□ 0.48
HMG20B-215ENST00000585741 TIGD5Q53EQ6 642 aa18.08■□□□□ 0.48
HMG20B-215ENST00000585741 SFMBT2Q5VUG0 894 aa18.08■□□□□ 0.48
HMG20B-215ENST00000585741 ADGRF2Q8IZF7 708 aa18.08■□□□□ 0.48
HMG20B-215ENST00000585741 TMEM86AQ8N2M4 240 aa18.08■□□□□ 0.48
HMG20B-215ENST00000585741 C3orf58Q8NDZ4 430 aa18.08■□□□□ 0.48
HMG20B-215ENST00000585741 OR6B3Q8NGW1 331 aa18.08■□□□□ 0.48
HMG20B-215ENST00000585741 FAM124BQ9H5Z6 455 aaPredicted RBP18.08■□□□□ 0.48
HMG20B-215ENST00000585741 SMYD3Q9H7B4 428 aa18.08■□□□□ 0.48
HMG20B-215ENST00000585741 MYO6Q9UM54 1294 aa18.08■□□□□ 0.48
HMG20B-215ENST00000585741 LRRC53A6NM62 1247 aa18.07■□□□□ 0.48
HMG20B-215ENST00000585741 RAP1GAPP47736 663 aa18.07■□□□□ 0.48
HMG20B-215ENST00000585741 ADKP55263 362 aaKnown RBP18.07■□□□□ 0.48
HMG20B-215ENST00000585741 FUT10Q6P4F1 479 aa18.07■□□□□ 0.48
HMG20B-215ENST00000585741 PDXDC1Q6P996 788 aa18.07■□□□□ 0.48
HMG20B-215ENST00000585741 TMEM270Q6UE05 265 aa18.07■□□□□ 0.48
HMG20B-215ENST00000585741 CEP57Q86XR8 500 aa18.07■□□□□ 0.48
HMG20B-215ENST00000585741 THEM5Q8N1Q8 247 aa18.07■□□□□ 0.48
HMG20B-215ENST00000585741 OR8K1Q8NGG5 319 aa18.07■□□□□ 0.48
HMG20B-215ENST00000585741 KAT5Q92993 513 aa18.07■□□□□ 0.48
HMG20B-215ENST00000585741 SUSD3Q96L08 255 aa18.07■□□□□ 0.48
HMG20B-215ENST00000585741 BCO2Q9BYV7 579 aa18.07■□□□□ 0.48
HMG20B-215ENST00000585741 CISHQ9NSE2 258 aa18.07■□□□□ 0.48
HMG20B-215ENST00000585741 PCDHB8Q9UN66 801 aa18.07■□□□□ 0.48
HMG20B-215ENST00000585741 FNDC1Q4ZHG4 1894 aaPredicted RBP18.07■□□□□ 0.48
HMG20B-215ENST00000585741 A8MXQ7 604 aa18.06■□□□□ 0.48
HMG20B-215ENST00000585741 F8VZ95 297 aa18.06■□□□□ 0.48
HMG20B-215ENST00000585741 I3L4J1 428 aa18.06■□□□□ 0.48
HMG20B-215ENST00000585741 MFAP3LO75121 409 aa18.06■□□□□ 0.48
HMG20B-215ENST00000585741 TACC1O75410 805 aa18.06■□□□□ 0.48
HMG20B-215ENST00000585741 FAM163BP0C2L3 166 aa18.06■□□□□ 0.48
HMG20B-215ENST00000585741 FERP16591 822 aa18.06■□□□□ 0.48
HMG20B-215ENST00000585741 CTNNB1P35222 781 aa18.06■□□□□ 0.48
HMG20B-215ENST00000585741 SOX5P35711 763 aa18.06■□□□□ 0.48
HMG20B-215ENST00000585741 LHX1P48742 406 aa18.06■□□□□ 0.48
HMG20B-215ENST00000585741 CDH8P55286 799 aa18.06■□□□□ 0.48
HMG20B-215ENST00000585741 BPIFB4P59827 614 aa18.06■□□□□ 0.48
HMG20B-215ENST00000585741 ARID5AQ03989 594 aa18.06■□□□□ 0.48
HMG20B-215ENST00000585741 TBX2Q13207 712 aaPredicted RBP18.06■□□□□ 0.48
HMG20B-215ENST00000585741 ASIC2Q16515 512 aa18.06■□□□□ 0.48
HMG20B-215ENST00000585741 FAM171A1Q5VUB5 890 aa18.06■□□□□ 0.48
HMG20B-215ENST00000585741 KIAA1841Q6NSI8 718 aa18.06■□□□□ 0.48
HMG20B-215ENST00000585741 SP7Q8TDD2 431 aaPredicted RBP18.06■□□□□ 0.48
HMG20B-215ENST00000585741 IGSF21Q96ID5 467 aa18.06■□□□□ 0.48
HMG20B-215ENST00000585741 KREMEN1Q96MU8 473 aa18.06■□□□□ 0.48
HMG20B-215ENST00000585741 ARID3AQ99856 593 aa18.06■□□□□ 0.48
HMG20B-215ENST00000585741 C1QTNF1Q9BXJ1 281 aa18.06■□□□□ 0.48
HMG20B-215ENST00000585741 NAA15Q9BXJ9 866 aaKnown RBP18.06■□□□□ 0.48
HMG20B-215ENST00000585741 TTYH3Q9C0H2 523 aa18.06■□□□□ 0.48
HMG20B-215ENST00000585741 CD320Q9NPF0 282 aa18.06■□□□□ 0.48
HMG20B-215ENST00000585741 STK39Q9UEW8 545 aa18.06■□□□□ 0.48
HMG20B-215ENST00000585741 PUF60Q9UHX1 559 aaKnown RBP18.06■□□□□ 0.48
HMG20B-215ENST00000585741 BARX2Q9UMQ3 279 aaPredicted RBP18.06■□□□□ 0.48
HMG20B-215ENST00000585741 L1RE1Q9UN81 338 aa18.06■□□□□ 0.48
HMG20B-215ENST00000585741 TIMM13Q9Y5L4 95 aaPredicted RBP18.06■□□□□ 0.48
HMG20B-215ENST00000585741 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.05■□□□□ 0.48
HMG20B-215ENST00000585741 F8W810 466 aa18.05■□□□□ 0.48
HMG20B-215ENST00000585741 M0QZQ0 153 aa18.05■□□□□ 0.48
HMG20B-215ENST00000585741 SYN3O14994 580 aa18.05■□□□□ 0.48
HMG20B-215ENST00000585741 GFPT2O94808 682 aa18.05■□□□□ 0.48
HMG20B-215ENST00000585741 ITGB1P05556 798 aa18.05■□□□□ 0.48
HMG20B-215ENST00000585741 TYMPP19971 482 aa18.05■□□□□ 0.48
HMG20B-215ENST00000585741 GNL1P36915 607 aaPredicted RBP18.05■□□□□ 0.48
HMG20B-215ENST00000585741 PLA2G5P39877 138 aa18.05■□□□□ 0.48
HMG20B-215ENST00000585741 AARSP49588 968 aaKnown RBP eCLIP18.05■□□□□ 0.48
HMG20B-215ENST00000585741 BMS1Q14692 1282 aaKnown RBP18.05■□□□□ 0.48
HMG20B-215ENST00000585741 SOWAHAQ2M3V2 549 aa18.05■□□□□ 0.48
HMG20B-215ENST00000585741 WSCD1Q658N2 575 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms