RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 TYMPP19971 482 aa13.28□□□□□ -0.28
CDK5RAP3-216ENST00000579853 TUFMP49411 452 aaKnown RBP13.28□□□□□ -0.28
CDK5RAP3-216ENST00000579853 AARSP49588 968 aaKnown RBP eCLIP13.28□□□□□ -0.28
CDK5RAP3-216ENST00000579853 NOVA1P51513 510 aaKnown RBP13.28□□□□□ -0.28
CDK5RAP3-216ENST00000579853 NOLC1Q14978 699 aaKnown RBP eCLIP13.28□□□□□ -0.28
CDK5RAP3-216ENST00000579853 KYAT1Q16773 422 aa13.28□□□□□ -0.28
CDK5RAP3-216ENST00000579853 SLC10A6Q3KNW5 377 aa13.28□□□□□ -0.28
CDK5RAP3-216ENST00000579853 FBXO43Q4G163 708 aa13.28□□□□□ -0.28
CDK5RAP3-216ENST00000579853 TMEM196Q5HYL7 178 aa13.28□□□□□ -0.28
CDK5RAP3-216ENST00000579853 DSTYKQ6XUX3 929 aa13.28□□□□□ -0.28
CDK5RAP3-216ENST00000579853 C11orf74Q86VG3 221 aa13.28□□□□□ -0.28
CDK5RAP3-216ENST00000579853 LRRC3BQ96PB8 259 aa13.28□□□□□ -0.28
CDK5RAP3-216ENST00000579853 PGLYRP2Q96PD5 576 aa13.28□□□□□ -0.28
CDK5RAP3-216ENST00000579853 TSPAN18Q96SJ8 248 aa13.28□□□□□ -0.28
CDK5RAP3-216ENST00000579853 NTPCRQ9BSD7 190 aaKnown RBP13.28□□□□□ -0.28
CDK5RAP3-216ENST00000579853 EDEM2Q9BV94 578 aa13.28□□□□□ -0.28
CDK5RAP3-216ENST00000579853 TIPINQ9BVW5 301 aa13.28□□□□□ -0.28
CDK5RAP3-216ENST00000579853 POLD4Q9HCU8 107 aa13.28□□□□□ -0.28
CDK5RAP3-216ENST00000579853 LRWD1Q9UFC0 647 aa13.28□□□□□ -0.28
CDK5RAP3-216ENST00000579853 ZMIZ1Q9ULJ6 1067 aa13.28□□□□□ -0.28
CDK5RAP3-216ENST00000579853 UBQLN1Q9UMX0 589 aaKnown RBP13.28□□□□□ -0.28
CDK5RAP3-216ENST00000579853 KIAA1024Q9UPX6 916 aa13.28□□□□□ -0.28
CDK5RAP3-216ENST00000579853 DNM3Q9UQ16 869 aa13.28□□□□□ -0.28
CDK5RAP3-216ENST00000579853 GON4LQ3T8J9 2241 aa13.28□□□□□ -0.28
CDK5RAP3-216ENST00000579853 MTMR11A4FU01 709 aa13.27□□□□□ -0.29
CDK5RAP3-216ENST00000579853 ABLIM1O14639 778 aa13.27□□□□□ -0.29
CDK5RAP3-216ENST00000579853 CLDN3O15551 220 aa13.27□□□□□ -0.29
CDK5RAP3-216ENST00000579853 VNN2O95498 520 aa13.27□□□□□ -0.29
CDK5RAP3-216ENST00000579853 CLTAP09496 248 aa13.27□□□□□ -0.29
CDK5RAP3-216ENST00000579853 HARSP12081 509 aaKnown RBP13.27□□□□□ -0.29
CDK5RAP3-216ENST00000579853 DRD1P21728 446 aa13.27□□□□□ -0.29
CDK5RAP3-216ENST00000579853 PXNP49023 591 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP3-216ENST00000579853 SMTNP53814 917 aa13.27□□□□□ -0.29
CDK5RAP3-216ENST00000579853 TNK2Q07912 1038 aa13.27□□□□□ -0.29
CDK5RAP3-216ENST00000579853 RUNX3Q13761 415 aa13.27□□□□□ -0.29
CDK5RAP3-216ENST00000579853 COL9A2Q14055 689 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP3-216ENST00000579853 PDIA5Q14554 519 aa13.27□□□□□ -0.29
CDK5RAP3-216ENST00000579853 ACAP1Q15027 740 aa13.27□□□□□ -0.29
CDK5RAP3-216ENST00000579853 TAF12Q16514 161 aa13.27□□□□□ -0.29
CDK5RAP3-216ENST00000579853 OVOS1Q6IE37 1185 aa13.27□□□□□ -0.29
CDK5RAP3-216ENST00000579853 ZPBP2Q6X784 338 aa13.27□□□□□ -0.29
CDK5RAP3-216ENST00000579853 TAS1R3Q7RTX0 852 aa13.27□□□□□ -0.29
CDK5RAP3-216ENST00000579853 CCDC26Q8TAB7 109 aa13.27□□□□□ -0.29
CDK5RAP3-216ENST00000579853 GTF3C6Q969F1 213 aa13.27□□□□□ -0.29
CDK5RAP3-216ENST00000579853 FAM83CQ9BQN1 747 aa13.27□□□□□ -0.29
CDK5RAP3-216ENST00000579853 CRISPLD1Q9H336 500 aa13.27□□□□□ -0.29
CDK5RAP3-216ENST00000579853 DDX19AQ9NUU7 478 aaKnown RBP13.27□□□□□ -0.29
CDK5RAP3-216ENST00000579853 TUBGCP4Q9UGJ1 667 aa13.27□□□□□ -0.29
CDK5RAP3-216ENST00000579853 RALYQ9UKM9 306 aaKnown RBP13.27□□□□□ -0.29
CDK5RAP3-216ENST00000579853 TIMM13Q9Y5L4 95 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP3-216ENST00000579853 PCNX2A6NKB5 2137 aa13.26□□□□□ -0.29
CDK5RAP3-216ENST00000579853 SOBPA7XYQ1 873 aa13.26□□□□□ -0.29
CDK5RAP3-216ENST00000579853 C1QTNF9BB2RNN3 333 aa13.26□□□□□ -0.29
CDK5RAP3-216ENST00000579853 HIP1RO75146 1068 aa13.26□□□□□ -0.29
CDK5RAP3-216ENST00000579853 PRAMEF12O95522 483 aa13.26□□□□□ -0.29
CDK5RAP3-216ENST00000579853 CAVIN2O95810 425 aa13.26□□□□□ -0.29
CDK5RAP3-216ENST00000579853 OR4Q2P0C623 313 aa13.26□□□□□ -0.29
CDK5RAP3-216ENST00000579853 C1QTNF9P0C862 333 aa13.26□□□□□ -0.29
CDK5RAP3-216ENST00000579853 ODC1P11926 461 aa13.26□□□□□ -0.29
CDK5RAP3-216ENST00000579853 CEACAM1P13688 526 aa13.26□□□□□ -0.29
CDK5RAP3-216ENST00000579853 AVPR1AP37288 418 aa13.26□□□□□ -0.29
CDK5RAP3-216ENST00000579853 EML5Q05BV3 1969 aa13.26□□□□□ -0.29
CDK5RAP3-216ENST00000579853 ZNF252P-AS1Q0IIN9 211 aa13.26□□□□□ -0.29
CDK5RAP3-216ENST00000579853 SMARCB1Q12824 385 aa13.26□□□□□ -0.29
CDK5RAP3-216ENST00000579853 GPIHBP1Q8IV16 184 aa13.26□□□□□ -0.29
CDK5RAP3-216ENST00000579853 CMTM8Q8IZV2 173 aa13.26□□□□□ -0.29
CDK5RAP3-216ENST00000579853 ATAD1Q8NBU5 361 aa13.26□□□□□ -0.29
CDK5RAP3-216ENST00000579853 NSUN7Q8NE18 718 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-216ENST00000579853 SPIRE2Q8WWL2 714 aa13.26□□□□□ -0.29
CDK5RAP3-216ENST00000579853 ACDQ96AP0 544 aa13.26□□□□□ -0.29
CDK5RAP3-216ENST00000579853 KIF12Q96FN5 646 aa13.26□□□□□ -0.29
CDK5RAP3-216ENST00000579853 DUSP15Q9H1R2 295 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP3-216ENST00000579853 KIF9Q9HAQ2 790 aa13.26□□□□□ -0.29
CDK5RAP3-216ENST00000579853 GKN1Q9NS71 199 aa13.26□□□□□ -0.29
CDK5RAP3-216ENST00000579853 ANKFY1Q9P2R3 1169 aa13.26□□□□□ -0.29
CDK5RAP3-216ENST00000579853 EBF1Q9UH73 591 aa13.26□□□□□ -0.29
CDK5RAP3-216ENST00000579853 KIF26AQ9ULI4 1882 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP3-216ENST00000579853 SLC27A5Q9Y2P5 690 aa13.26□□□□□ -0.29
CDK5RAP3-216ENST00000579853 ASCC3Q8N3C0 2202 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 ABCA7Q8IZY2 2146 aa13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 TTC26A0AVF1 554 aa13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 BCLAF3A2AJT9 711 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 C4orf47A7E2U8 309 aa13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 MEFVO15553 781 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 DTNBO60941 627 aa13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 RNF40O75150 1001 aa13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 LARGE1O95461 756 aa13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 APBB3O95704 486 aa13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 CSRP1P21291 193 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 DDX6P26196 483 aaKnown RBP eCLIP13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 TRAPPC10P48553 1259 aa13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 ANAPC15P60006 121 aa13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 CREB5Q02930 508 aa13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 PPP2R3AQ06190 1150 aa13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 MCL1Q07820 350 aa13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 BFSP1Q12934 665 aa13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 ZNF174Q15697 407 aa13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 ZBTB6Q15916 424 aa13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 ECM1Q16610 540 aa13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 FSTL4Q6MZW2 842 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms