RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 SEMA4AQ9H3S1 761 aa11.97□□□□□ -0.49
CDK5RAP3-204ENST00000577664 NRDE2Q9H7Z3 1164 aa11.97□□□□□ -0.49
CDK5RAP3-204ENST00000577664 OTOGLQ3ZCN5 2332 aa11.97□□□□□ -0.49
CDK5RAP3-204ENST00000577664 FRYLO94915 3013 aa11.96□□□□□ -0.49
CDK5RAP3-204ENST00000577664 NOL4O94818 638 aa11.96□□□□□ -0.49
CDK5RAP3-204ENST00000577664 HLA-DRAP01903 254 aa11.96□□□□□ -0.49
CDK5RAP3-204ENST00000577664 ALDH2P05091 517 aa11.96□□□□□ -0.49
CDK5RAP3-204ENST00000577664 ITGB3P05106 788 aa11.96□□□□□ -0.49
CDK5RAP3-204ENST00000577664 SLC9A1P19634 815 aa11.96□□□□□ -0.49
CDK5RAP3-204ENST00000577664 RFX1P22670 979 aa11.96□□□□□ -0.49
CDK5RAP3-204ENST00000577664 LILRA4P59901 499 aa11.96□□□□□ -0.49
CDK5RAP3-204ENST00000577664 MYL7Q01449 175 aa11.96□□□□□ -0.49
CDK5RAP3-204ENST00000577664 GCNT1Q02742 428 aa11.96□□□□□ -0.49
CDK5RAP3-204ENST00000577664 ADAM15Q13444 863 aa11.96□□□□□ -0.49
CDK5RAP3-204ENST00000577664 PTPN21Q16825 1174 aa11.96□□□□□ -0.49
CDK5RAP3-204ENST00000577664 GLRA4Q5JXX5 417 aa11.96□□□□□ -0.49
CDK5RAP3-204ENST00000577664 LMBRD2Q68DH5 695 aaPredicted RBP11.96□□□□□ -0.49
CDK5RAP3-204ENST00000577664 SCARA3Q6AZY7 606 aa11.96□□□□□ -0.49
CDK5RAP3-204ENST00000577664 TRIM65Q6PJ69 517 aa11.96□□□□□ -0.49
CDK5RAP3-204ENST00000577664 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.96□□□□□ -0.49
CDK5RAP3-204ENST00000577664 LRRC43Q8N309 656 aa11.96□□□□□ -0.49
CDK5RAP3-204ENST00000577664 SMRP1Q8NCR6 262 aa11.96□□□□□ -0.49
CDK5RAP3-204ENST00000577664 NUP58Q9BVL2 599 aa11.96□□□□□ -0.49
CDK5RAP3-204ENST00000577664 NAA15Q9BXJ9 866 aaKnown RBP11.96□□□□□ -0.49
CDK5RAP3-204ENST00000577664 TRIM5Q9C035 493 aa11.96□□□□□ -0.49
CDK5RAP3-204ENST00000577664 TTYH3Q9C0H2 523 aa11.96□□□□□ -0.49
CDK5RAP3-204ENST00000577664 LMAN2LQ9H0V9 348 aa11.96□□□□□ -0.49
CDK5RAP3-204ENST00000577664 SIX2Q9NPC8 291 aa11.96□□□□□ -0.49
CDK5RAP3-204ENST00000577664 TUBGCP4Q9UGJ1 667 aa11.96□□□□□ -0.49
CDK5RAP3-204ENST00000577664 TDRD15B5MCY1 1934 aaKnown RBP11.96□□□□□ -0.5
CDK5RAP3-204ENST00000577664 TBKBP1A7MCY6 615 aa11.95□□□□□ -0.5
CDK5RAP3-204ENST00000577664 UPP2O95045 317 aa11.95□□□□□ -0.5
CDK5RAP3-204ENST00000577664 GALTP07902 379 aa11.95□□□□□ -0.5
CDK5RAP3-204ENST00000577664 CLCNKBP51801 687 aa11.95□□□□□ -0.5
CDK5RAP3-204ENST00000577664 MYL6P60660 151 aa11.95□□□□□ -0.5
CDK5RAP3-204ENST00000577664 MYO1EQ12965 1108 aa11.95□□□□□ -0.5
CDK5RAP3-204ENST00000577664 TBX2Q13207 712 aaPredicted RBP11.95□□□□□ -0.5
CDK5RAP3-204ENST00000577664 TRPC3Q13507 836 aa11.95□□□□□ -0.5
CDK5RAP3-204ENST00000577664 ARID5BQ14865 1188 aa11.95□□□□□ -0.5
CDK5RAP3-204ENST00000577664 SYCP1Q15431 976 aa11.95□□□□□ -0.5
CDK5RAP3-204ENST00000577664 KLHDC7AQ5VTJ3 777 aa11.95□□□□□ -0.5
CDK5RAP3-204ENST00000577664 SPECC1LQ69YQ0 1117 aa11.95□□□□□ -0.5
CDK5RAP3-204ENST00000577664 PHLDB3Q6NSJ2 640 aa11.95□□□□□ -0.5
CDK5RAP3-204ENST00000577664 ENOSF1Q7L5Y1 443 aa11.95□□□□□ -0.5
CDK5RAP3-204ENST00000577664 VSTM4Q8IW00 320 aa11.95□□□□□ -0.5
CDK5RAP3-204ENST00000577664 SPATA18Q8TC71 538 aa11.95□□□□□ -0.5
CDK5RAP3-204ENST00000577664 HPDLQ96IR7 371 aa11.95□□□□□ -0.5
CDK5RAP3-204ENST00000577664 GCNT4Q9P109 453 aa11.95□□□□□ -0.5
CDK5RAP3-204ENST00000577664 AGAP1Q9UPQ3 857 aa11.95□□□□□ -0.5
CDK5RAP3-204ENST00000577664 CNTN6Q9UQ52 1028 aa11.95□□□□□ -0.5
CDK5RAP3-204ENST00000577664 PCDHGC5Q9Y5F6 944 aa11.95□□□□□ -0.5
CDK5RAP3-204ENST00000577664 NLRC5Q86WI3 1866 aa11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 A0A1W2PQJ5 194 aa11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 KPNA7A9QM74 516 aa11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 C5orf67F2Z3F1 127 aa11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 M0QZQ0 153 aa11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 PODXLO00592 558 aa11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 NRP1O14786 923 aa11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 B4GALT3O60512 393 aa11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 PHACTR2O75167 634 aa11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 LRRN2O75325 713 aa11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 ADCY5O95622 1261 aa11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 UCHL3P15374 230 aa11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 POLR2BP30876 1174 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 TAF6P49848 677 aa11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 GATMP50440 423 aa11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 RNASELQ05823 741 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 BIRC3Q13489 604 aa11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 WDR44Q5JSH3 913 aa11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 KIAA2013Q8IYS2 634 aa11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 RNF168Q8IYW5 571 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 ZNF560Q96MR9 790 aa11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 FAM193BQ96PV7 902 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 PAAF1Q9BRP4 392 aa11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 COLEC11Q9BWP8 271 aa11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 PHF7Q9BWX1 381 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 BCO2Q9BYV7 579 aa11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 INTS2Q9H0H0 1204 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 GANQ9H2C0 597 aa11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 CYP3A43Q9HB55 503 aa11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 APOBEC3GQ9HC16 384 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 APEX2Q9UBZ4 518 aa11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 DNAJB4Q9UDY4 337 aa11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 STK39Q9UEW8 545 aa11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 MYO6Q9UM54 1294 aa11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 INPP5FQ9Y2H2 1132 aa11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 NUB1Q9Y5A7 615 aa11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.94□□□□□ -0.59e-8■■□□□ 13.3
CDK5RAP3-204ENST00000577664 SETXQ7Z333 2677 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP3-204ENST00000577664 SCN1AP35498 2009 aa11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 SPTLC1O15269 473 aa11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 TACC1O75410 805 aa11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 LMNAP02545 664 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 CYP11A1P05108 521 aa11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 LAG3P18627 525 aa11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 TBXAS1P24557 533 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 PIK3CAP42336 1068 aa11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 ALDH7A1P49419 539 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 GUCY2FP51841 1108 aa11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 BCAR1P56945 870 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms