RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 C1QTNF9P0C862 333 aa19.05■□□□□ 0.64
CCDC40-211ENST00000574099 TNFSF9P41273 254 aa19.05■□□□□ 0.64
CCDC40-211ENST00000574099 AARSP49588 968 aaKnown RBP eCLIP19.05■□□□□ 0.64
CCDC40-211ENST00000574099 TRIM68Q6AZZ1 485 aa19.05■□□□□ 0.64
CCDC40-211ENST00000574099 RINT1Q6NUQ1 792 aa19.05■□□□□ 0.64
CCDC40-211ENST00000574099 ITIH5Q86UX2 942 aa19.05■□□□□ 0.64
CCDC40-211ENST00000574099 GCNAQ96QF7 691 aa19.05■□□□□ 0.64
CCDC40-211ENST00000574099 HHIPQ96QV1 700 aa19.05■□□□□ 0.64
CCDC40-211ENST00000574099 LSM14BQ9BX40 385 aaKnown RBP19.05■□□□□ 0.64
CCDC40-211ENST00000574099 HAPLN2Q9GZV7 340 aa19.05■□□□□ 0.64
CCDC40-211ENST00000574099 TASP1Q9H6P5 420 aa19.05■□□□□ 0.64
CCDC40-211ENST00000574099 UBQLN1Q9UMX0 589 aaKnown RBP19.05■□□□□ 0.64
CCDC40-211ENST00000574099 DNM3Q9UQ16 869 aa19.05■□□□□ 0.64
CCDC40-211ENST00000574099 ZNF638Q14966 1978 aaKnown RBP19.04■□□□□ 0.64
CCDC40-211ENST00000574099 CLDN3O15551 220 aa19.04■□□□□ 0.64
CCDC40-211ENST00000574099 RNF40O75150 1001 aa19.04■□□□□ 0.64
CCDC40-211ENST00000574099 FGF19O95750 216 aa19.04■□□□□ 0.64
CCDC40-211ENST00000574099 PPP2R3AQ06190 1150 aa19.04■□□□□ 0.64
CCDC40-211ENST00000574099 MYBPC2Q14324 1141 aa19.04■□□□□ 0.64
CCDC40-211ENST00000574099 MGAT5BQ3V5L5 792 aa19.04■□□□□ 0.64
CCDC40-211ENST00000574099 C1orf186Q6ZWK4 172 aa19.04■□□□□ 0.64
CCDC40-211ENST00000574099 KCNK18Q7Z418 384 aa19.04■□□□□ 0.64
CCDC40-211ENST00000574099 C4orf32Q8N8J7 132 aa19.04■□□□□ 0.64
CCDC40-211ENST00000574099 C8orf76Q96K31 380 aa19.04■□□□□ 0.64
CCDC40-211ENST00000574099 EDEM2Q9BV94 578 aa19.04■□□□□ 0.64
CCDC40-211ENST00000574099 EBF3Q9H4W6 596 aa19.04■□□□□ 0.64
CCDC40-211ENST00000574099 HPS4Q9NQG7 708 aa19.04■□□□□ 0.64
CCDC40-211ENST00000574099 GKN1Q9NS71 199 aa19.04■□□□□ 0.64
CCDC40-211ENST00000574099 THG1LQ9NWX6 298 aaKnown RBP19.04■□□□□ 0.64
CCDC40-211ENST00000574099 PCDHGA5Q9Y5G8 931 aa19.04■□□□□ 0.64
CCDC40-211ENST00000574099 CCDC163A0A0D9SF12 145 aa19.03■□□□□ 0.64
CCDC40-211ENST00000574099 TTC26A0AVF1 554 aa19.03■□□□□ 0.64
CCDC40-211ENST00000574099 EGFP01133 1207 aa19.03■□□□□ 0.64
CCDC40-211ENST00000574099 ATF6P18850 670 aa19.03■□□□□ 0.64
CCDC40-211ENST00000574099 CDC25AP30304 524 aa19.03■□□□□ 0.64
CCDC40-211ENST00000574099 NOVA1P51513 510 aaKnown RBP19.03■□□□□ 0.64
CCDC40-211ENST00000574099 ANAPC15P60006 121 aa19.03■□□□□ 0.64
CCDC40-211ENST00000574099 MCL1Q07820 350 aa19.03■□□□□ 0.64
CCDC40-211ENST00000574099 GRSF1Q12849 480 aaKnown RBP eCLIP19.03■□□□□ 0.64
CCDC40-211ENST00000574099 GNL2Q13823 731 aaKnown RBP19.03■□□□□ 0.64
CCDC40-211ENST00000574099 VEPH1Q14D04 833 aa19.03■□□□□ 0.64
CCDC40-211ENST00000574099 ZRSR1Q15695 479 aaKnown RBP19.03■□□□□ 0.64
CCDC40-211ENST00000574099 PLK5Q496M5 336 aa19.03■□□□□ 0.64
CCDC40-211ENST00000574099 TMEM196Q5HYL7 178 aa19.03■□□□□ 0.64
CCDC40-211ENST00000574099 ARMCX5Q6P1M9 558 aa19.03■□□□□ 0.64
CCDC40-211ENST00000574099 TMEM161BQ8NDZ6 487 aa19.03■□□□□ 0.64
CCDC40-211ENST00000574099 OR10T2Q8NGX3 314 aa19.03■□□□□ 0.64
CCDC40-211ENST00000574099 GIPC2Q8TF65 315 aa19.03■□□□□ 0.64
CCDC40-211ENST00000574099 CHFRQ96EP1 664 aa19.03■□□□□ 0.64
CCDC40-211ENST00000574099 BICD1Q96G01 975 aa19.03■□□□□ 0.64
CCDC40-211ENST00000574099 SLC46A2Q9BY10 475 aa19.03■□□□□ 0.64
CCDC40-211ENST00000574099 C17orf75Q9HAS0 396 aa19.03■□□□□ 0.64
CCDC40-211ENST00000574099 PLEKHA5Q9HAU0 1116 aa19.03■□□□□ 0.64
CCDC40-211ENST00000574099 IL21Q9HBE4 155 aa19.03■□□□□ 0.64
CCDC40-211ENST00000574099 VPS45Q9NRW7 570 aa19.03■□□□□ 0.64
CCDC40-211ENST00000574099 DENND4CQ5VZ89 1909 aa19.02■□□□□ 0.64
CCDC40-211ENST00000574099 OTOL1A6NHN0 477 aaPredicted RBP19.02■□□□□ 0.64
CCDC40-211ENST00000574099 LACTBL1A8MY62 500 aa19.02■□□□□ 0.64
CCDC40-211ENST00000574099 GIPC1O14908 333 aa19.02■□□□□ 0.64
CCDC40-211ENST00000574099 DCLK1O15075 740 aa19.02■□□□□ 0.64
CCDC40-211ENST00000574099 ATG13O75143 517 aa19.02■□□□□ 0.64
CCDC40-211ENST00000574099 CLTAP09496 248 aa19.02■□□□□ 0.64
CCDC40-211ENST00000574099 MAPTP10636 758 aaKnown RBP19.02■□□□□ 0.64
CCDC40-211ENST00000574099 ODC1P11926 461 aa19.02■□□□□ 0.64
CCDC40-211ENST00000574099 TYMPP19971 482 aa19.02■□□□□ 0.64
CCDC40-211ENST00000574099 U2AF2P26368 475 aaKnown RBP eCLIP19.02■□□□□ 0.64
CCDC40-211ENST00000574099 CDC25CP30307 473 aa19.02■□□□□ 0.64
CCDC40-211ENST00000574099 CREB5Q02930 508 aa19.02■□□□□ 0.64
CCDC40-211ENST00000574099 FOXC1Q12948 553 aa19.02■□□□□ 0.64
CCDC40-211ENST00000574099 RUNX3Q13761 415 aa19.02■□□□□ 0.64
CCDC40-211ENST00000574099 COL9A2Q14055 689 aaPredicted RBP19.02■□□□□ 0.64
CCDC40-211ENST00000574099 PTPAQ15257 358 aa19.02■□□□□ 0.64
CCDC40-211ENST00000574099 ZBTB6Q15916 424 aa19.02■□□□□ 0.64
CCDC40-211ENST00000574099 SLC39A12Q504Y0 691 aa19.02■□□□□ 0.64
CCDC40-211ENST00000574099 UNQ6494/PRO21346Q6UXR6 183 aa19.02■□□□□ 0.64
CCDC40-211ENST00000574099 ZPBP2Q6X784 338 aa19.02■□□□□ 0.64
CCDC40-211ENST00000574099 IGSF22Q8N9C0 903 aa19.02■□□□□ 0.64
CCDC40-211ENST00000574099 RAB34Q9BZG1 259 aa19.02■□□□□ 0.64
CCDC40-211ENST00000574099 FOXP1Q9H334 677 aaPredicted RBP19.02■□□□□ 0.64
CCDC40-211ENST00000574099 SH2B1Q9NRF2 756 aaPredicted RBP19.02■□□□□ 0.64
CCDC40-211ENST00000574099 ZMIZ1Q9ULJ6 1067 aa19.02■□□□□ 0.64
CCDC40-211ENST00000574099 CCL26Q9Y258 94 aa19.02■□□□□ 0.64
CCDC40-211ENST00000574099 OBSL1O75147 1896 aa19.02■□□□□ 0.64
CCDC40-211ENST00000574099 CEP295Q9C0D2 2601 aa19.02■□□□□ 0.63
CCDC40-211ENST00000574099 MYO16Q9Y6X6 1858 aa19.01■□□□□ 0.63
CCDC40-211ENST00000574099 AKAP3O75969 853 aa19.01■□□□□ 0.63
CCDC40-211ENST00000574099 PLS3P13797 630 aa19.01■□□□□ 0.63
CCDC40-211ENST00000574099 ARSAP15289 507 aa19.01■□□□□ 0.63
CCDC40-211ENST00000574099 SPINK2P20155 84 aa19.01■□□□□ 0.63
CCDC40-211ENST00000574099 CYP3A5P20815 502 aa19.01■□□□□ 0.63
CCDC40-211ENST00000574099 NMT1P30419 496 aaKnown RBP19.01■□□□□ 0.63
CCDC40-211ENST00000574099 TAF12Q16514 161 aa19.01■□□□□ 0.63
CCDC40-211ENST00000574099 KRT79Q5XKE5 535 aa19.01■□□□□ 0.63
CCDC40-211ENST00000574099 NAIF1Q69YI7 327 aaPredicted RBP19.01■□□□□ 0.63
CCDC40-211ENST00000574099 FAM212AQ96EL1 285 aa19.01■□□□□ 0.63
CCDC40-211ENST00000574099 ZC3H10Q96K80 434 aaKnown RBP19.01■□□□□ 0.63
CCDC40-211ENST00000574099 SENP8Q96LD8 212 aa19.01■□□□□ 0.63
CCDC40-211ENST00000574099 FAM83CQ9BQN1 747 aa19.01■□□□□ 0.63
CCDC40-211ENST00000574099 DUSP15Q9H1R2 295 aaPredicted RBP19.01■□□□□ 0.63
CCDC40-211ENST00000574099 NOL7Q9UMY1 257 aaKnown RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms