RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 MCOLN2Q8IZK6 566 aa16.25■□□□□ 0.19
SMG6-207ENST00000570756 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.25■□□□□ 0.19
SMG6-207ENST00000570756 EXD1Q8NHP7 514 aa16.25■□□□□ 0.19
SMG6-207ENST00000570756 CCDC110Q8TBZ0 833 aa16.25■□□□□ 0.19
SMG6-207ENST00000570756 MRRFQ96E11 262 aaKnown RBP16.25■□□□□ 0.19
SMG6-207ENST00000570756 NT5C1BQ96P26 610 aa16.25■□□□□ 0.19
SMG6-207ENST00000570756 CBWD1Q9BRT8 395 aa16.25■□□□□ 0.19
SMG6-207ENST00000570756 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.25■□□□□ 0.191e-7■■■■■ 115.4
SMG6-207ENST00000570756 DNAJB4Q9UDY4 337 aa16.25■□□□□ 0.19
SMG6-207ENST00000570756 COMMD3-BMI1R4GMX3 469 aa16.25■□□□□ 0.19
SMG6-207ENST00000570756 LOXHD1Q8IVV2 1947 aa16.25■□□□□ 0.19
SMG6-207ENST00000570756 GRIN3BO60391 1043 aa16.24■□□□□ 0.19
SMG6-207ENST00000570756 CIB2O75838 187 aa16.24■□□□□ 0.19
SMG6-207ENST00000570756 PYGLP06737 847 aa16.24■□□□□ 0.19
SMG6-207ENST00000570756 MCL1Q07820 350 aa16.24■□□□□ 0.19
SMG6-207ENST00000570756 FASTKD3Q14CZ7 662 aaKnown RBP16.24■□□□□ 0.19
SMG6-207ENST00000570756 TRAPPC3LQ5T215 181 aa16.24■□□□□ 0.19
SMG6-207ENST00000570756 FAM91A1Q658Y4 838 aa16.24■□□□□ 0.19
SMG6-207ENST00000570756 FAM43BQ6ZT52 329 aaPredicted RBP16.24■□□□□ 0.19
SMG6-207ENST00000570756 KBTBD2Q8IY47 623 aa16.24■□□□□ 0.19
SMG6-207ENST00000570756 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.24■□□□□ 0.19
SMG6-207ENST00000570756 AKT1S1Q96B36 256 aa16.24■□□□□ 0.19
SMG6-207ENST00000570756 TMEM120AQ9BXJ8 343 aa16.24■□□□□ 0.19
SMG6-207ENST00000570756 RANBP17Q9H2T7 1088 aaKnown RBP16.24■□□□□ 0.19
SMG6-207ENST00000570756 ZWILCHQ9H900 591 aa16.24■□□□□ 0.19
SMG6-207ENST00000570756 SHOC2Q9UQ13 582 aa16.24■□□□□ 0.19
SMG6-207ENST00000570756 GAS7O60861 476 aa16.24■□□□□ 0.19
SMG6-207ENST00000570756 CDK7P50613 346 aa16.24■□□□□ 0.19
SMG6-207ENST00000570756 ARSEP51690 589 aa16.24■□□□□ 0.19
SMG6-207ENST00000570756 SNRPFP62306 86 aaKnown RBP16.24■□□□□ 0.19
SMG6-207ENST00000570756 AP2B1P63010 937 aa16.24■□□□□ 0.19
SMG6-207ENST00000570756 CCDC142Q17RM4 750 aa16.24■□□□□ 0.19
SMG6-207ENST00000570756 LIN52Q52LA3 116 aa16.24■□□□□ 0.19
SMG6-207ENST00000570756 EAPPQ56P03 285 aaPredicted RBP16.24■□□□□ 0.19
SMG6-207ENST00000570756 KRT39Q6A163 491 aa16.24■□□□□ 0.19
SMG6-207ENST00000570756 IZUMO2Q6UXV1 221 aa16.24■□□□□ 0.19
SMG6-207ENST00000570756 NET1Q7Z628 596 aaPredicted RBP16.24■□□□□ 0.19
SMG6-207ENST00000570756 ST13P4Q8IZP2 240 aaPredicted RBP16.24■□□□□ 0.19
SMG6-207ENST00000570756 TCP10LQ8TDR4 215 aa16.24■□□□□ 0.19
SMG6-207ENST00000570756 MIS12Q9H081 205 aa16.24■□□□□ 0.19
SMG6-207ENST00000570756 NDE1Q9NXR1 346 aa16.24■□□□□ 0.19
SMG6-207ENST00000570756 ZNF148Q9UQR1 794 aa16.24■□□□□ 0.19
SMG6-207ENST00000570756 WASF2Q9Y6W5 498 aa16.24■□□□□ 0.19
SMG6-207ENST00000570756 LIASO43766 372 aa16.23■□□□□ 0.19
SMG6-207ENST00000570756 ZCCHC18P0CG32 403 aa16.23■□□□□ 0.19
SMG6-207ENST00000570756 ATP2B4P23634 1241 aa16.23■□□□□ 0.19
SMG6-207ENST00000570756 HOXA13P31271 388 aaPredicted RBP16.23■□□□□ 0.19
SMG6-207ENST00000570756 GPS1Q13098 491 aa16.23■□□□□ 0.19
SMG6-207ENST00000570756 TRMT5Q32P41 509 aaKnown RBP16.23■□□□□ 0.19
SMG6-207ENST00000570756 CERKLQ49MI3 558 aaPredicted RBP16.23■□□□□ 0.19
SMG6-207ENST00000570756 HP1BP3Q5SSJ5 553 aaPredicted RBP16.23■□□□□ 0.19
SMG6-207ENST00000570756 DRICH1Q6PGQ1 229 aaPredicted RBP16.23■□□□□ 0.19
SMG6-207ENST00000570756 TMPRSS6Q8IU80 811 aa16.23■□□□□ 0.19
SMG6-207ENST00000570756 ZNF276Q8N554 614 aa16.23■□□□□ 0.19
SMG6-207ENST00000570756 HELQQ8TDG4 1101 aa16.23■□□□□ 0.19
SMG6-207ENST00000570756 MKL1Q969V6 931 aa16.23■□□□□ 0.19
SMG6-207ENST00000570756 FAM161BQ96MY7 647 aa16.23■□□□□ 0.19
SMG6-207ENST00000570756 ECSITQ9BQ95 431 aa16.23■□□□□ 0.19
SMG6-207ENST00000570756 LBHD1Q9BQE6 289 aaPredicted RBP16.23■□□□□ 0.19
SMG6-207ENST00000570756 DDX4Q9NQI0 724 aaKnown RBP16.23■□□□□ 0.19
SMG6-207ENST00000570756 FBXO6Q9NRD1 293 aaPredicted RBP16.23■□□□□ 0.19
SMG6-207ENST00000570756 ATXN10Q9UBB4 475 aa16.23■□□□□ 0.19
SMG6-207ENST00000570756 NFASCO94856 1347 aa16.23■□□□□ 0.19
SMG6-207ENST00000570756 UNGP13051 313 aaPredicted RBP16.23■□□□□ 0.19
SMG6-207ENST00000570756 KRT5P13647 590 aa16.23■□□□□ 0.19
SMG6-207ENST00000570756 ANPEPP15144 967 aa16.23■□□□□ 0.19
SMG6-207ENST00000570756 GPC3P51654 580 aa16.23■□□□□ 0.19
SMG6-207ENST00000570756 GPSM2P81274 684 aa16.23■□□□□ 0.19
SMG6-207ENST00000570756 PDIA2Q13087 525 aaKnown RBP16.23■□□□□ 0.19
SMG6-207ENST00000570756 KLHL38Q2WGJ6 581 aa16.23■□□□□ 0.19
SMG6-207ENST00000570756 PHLDB2Q86SQ0 1253 aa16.23■□□□□ 0.19
SMG6-207ENST00000570756 STKLD1Q8NE28 680 aa16.23■□□□□ 0.19
SMG6-207ENST00000570756 PLEKHO2Q8TD55 490 aa16.23■□□□□ 0.19
SMG6-207ENST00000570756 PPP2R3CQ969Q6 453 aa16.23■□□□□ 0.19
SMG6-207ENST00000570756 HAPLN3Q96S86 360 aa16.23■□□□□ 0.19
SMG6-207ENST00000570756 WDR11Q9BZH6 1224 aa16.23■□□□□ 0.19
SMG6-207ENST00000570756 UBE2OQ9C0C9 1292 aaKnown RBP16.23■□□□□ 0.19
SMG6-207ENST00000570756 TISP43B9A030 160 aa16.22■□□□□ 0.19
SMG6-207ENST00000570756 PENKP01210 267 aaPredicted RBP16.22■□□□□ 0.19
SMG6-207ENST00000570756 EEF2P13639 858 aaKnown RBP16.22■□□□□ 0.19
SMG6-207ENST00000570756 NSFP46459 744 aaKnown RBP16.22■□□□□ 0.19
SMG6-207ENST00000570756 NEK3P51956 506 aa16.22■□□□□ 0.19
SMG6-207ENST00000570756 SLC51AQ86UW1 340 aa16.22■□□□□ 0.19
SMG6-207ENST00000570756 DAW1Q8N136 415 aa16.22■□□□□ 0.19
SMG6-207ENST00000570756 OGFOD1Q8N543 542 aa16.22■□□□□ 0.19
SMG6-207ENST00000570756 SEMA4DQ92854 862 aa16.22■□□□□ 0.19
SMG6-207ENST00000570756 OXNAD1Q96HP4 312 aaPredicted RBP16.22■□□□□ 0.19
SMG6-207ENST00000570756 FNBP1Q96RU3 617 aa16.22■□□□□ 0.19
SMG6-207ENST00000570756 FHDC1Q9C0D6 1143 aaPredicted RBP16.22■□□□□ 0.19
SMG6-207ENST00000570756 CHCHD3Q9NX63 227 aaKnown RBP16.22■□□□□ 0.19
SMG6-207ENST00000570756 NYAP2Q9P242 653 aa16.22■□□□□ 0.19
SMG6-207ENST00000570756 GGA1Q9UJY5 639 aa16.22■□□□□ 0.19
SMG6-207ENST00000570756 CRABP2P29373 138 aa16.21■□□□□ 0.19
SMG6-207ENST00000570756 IKQ13123 557 aaPredicted RBP16.21■□□□□ 0.19
SMG6-207ENST00000570756 LIN9Q5TKA1 542 aa16.21■□□□□ 0.19
SMG6-207ENST00000570756 ADGRD1Q6QNK2 874 aa16.21■□□□□ 0.19
SMG6-207ENST00000570756 ENOSF1Q7L5Y1 443 aa16.21■□□□□ 0.19
SMG6-207ENST00000570756 CHSY1Q86X52 802 aa16.21■□□□□ 0.19
SMG6-207ENST00000570756 NME8Q8N427 588 aa16.21■□□□□ 0.19
SMG6-207ENST00000570756 ALLCQ8N6M5 410 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms