RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 PARD6AQ9NPB6 346 aa9.12□□□□□ -0.95
PALB2-202ENST00000561514 BLOC1S4Q9NUP1 217 aa9.12□□□□□ -0.95
PALB2-202ENST00000561514 CPSF3Q9UKF6 684 aaKnown RBP9.12□□□□□ -0.95
PALB2-202ENST00000561514 TBX20Q9UMR3 447 aa9.12□□□□□ -0.95
PALB2-202ENST00000561514 NDRG2Q9UN36 371 aaKnown RBP9.12□□□□□ -0.95
PALB2-202ENST00000561514 DERAQ9Y315 318 aa9.12□□□□□ -0.95
PALB2-202ENST00000561514 KIF3AQ9Y496 699 aa9.12□□□□□ -0.95
PALB2-202ENST00000561514 STYXL1Q9Y6J8 313 aa9.12□□□□□ -0.95
PALB2-202ENST00000561514 USP24Q9UPU5 2620 aa9.12□□□□□ -0.95
PALB2-202ENST00000561514 CNOT1A5YKK6 2376 aaKnown RBP9.12□□□□□ -0.95
PALB2-202ENST00000561514 MIA3Q5JRA6 1907 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 A0A1W2PRU2 124 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 PIRO00625 290 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 HNRNPDLO14979 420 aaKnown RBP9.11□□□□□ -0.95
PALB2-202ENST00000561514 RETP07949 1114 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 OR4Q2P0C623 313 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 MYL4P12829 197 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 GJA1P17302 382 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 CTHP32929 405 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 ABCD1P33897 745 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 CNR2P34972 360 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 GUCY2FP51841 1108 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 ATXN1P54253 815 aaKnown RBP9.11□□□□□ -0.95
PALB2-202ENST00000561514 EPHB3P54753 998 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 LILRA4P59901 499 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 GTF2BQ00403 316 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 SATB1Q01826 763 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 RAD51AP2Q09MP3 1159 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 DUSP4Q13115 394 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 CCINQ13939 588 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 LRRC32Q14392 662 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 C8orf34Q49A92 452 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 DGKKQ5KSL6 1271 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 STXBP5Q5T5C0 1151 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 C9orf57Q5W0N0 161 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 OVOS1Q6IE37 1185 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 RALGPS2Q86X27 583 aaPredicted RBP9.11□□□□□ -0.95
PALB2-202ENST00000561514 ARID3BQ8IVW6 561 aaPredicted RBP9.11□□□□□ -0.95
PALB2-202ENST00000561514 SYNPOQ8N3V7 929 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 ATAD1Q8NBU5 361 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 OR10T2Q8NGX3 314 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 SENP8Q96LD8 212 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 RTKNQ9BST9 563 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 ZCWPW1Q9H0M4 648 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 LMAN1LQ9HAT1 526 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 IL21Q9HBE4 155 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 ZMYM5Q9UJ78 669 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 C2CD2Q9Y426 696 aa9.11□□□□□ -0.95
PALB2-202ENST00000561514 TIMM13Q9Y5L4 95 aaPredicted RBP9.11□□□□□ -0.95
PALB2-202ENST00000561514 NPHP3-ACAD11A0A0J9YXS1 232 aa9.1□□□□□ -0.95
PALB2-202ENST00000561514 VWA3AA6NCI4 1184 aa9.1□□□□□ -0.95
PALB2-202ENST00000561514 SOBPA7XYQ1 873 aa9.1□□□□□ -0.95
PALB2-202ENST00000561514 SPECC1L-ADORA2AF8WAN1 911 aa9.1□□□□□ -0.95
PALB2-202ENST00000561514 PRAMEF12O95522 483 aa9.1□□□□□ -0.95
PALB2-202ENST00000561514 ODC1P11926 461 aa9.1□□□□□ -0.95
PALB2-202ENST00000561514 CCNE1P24864 410 aa9.1□□□□□ -0.95
PALB2-202ENST00000561514 CXCL12P48061 93 aa9.1□□□□□ -0.95
PALB2-202ENST00000561514 LIG4P49917 911 aa9.1□□□□□ -0.95
PALB2-202ENST00000561514 SPAG1Q07617 926 aa9.1□□□□□ -0.95
PALB2-202ENST00000561514 SMARCB1Q12824 385 aa9.1□□□□□ -0.95
PALB2-202ENST00000561514 RABEP1Q15276 862 aa9.1□□□□□ -0.95
PALB2-202ENST00000561514 ARHGAP29Q52LW3 1261 aa9.1□□□□□ -0.95
PALB2-202ENST00000561514 TXNDC11Q6PKC3 985 aa9.1□□□□□ -0.95
PALB2-202ENST00000561514 DNAJB7Q7Z6W7 309 aaPredicted RBP9.1□□□□□ -0.95
PALB2-202ENST00000561514 USP37Q86T82 979 aa9.1□□□□□ -0.95
PALB2-202ENST00000561514 ITIH5Q86UX2 942 aa9.1□□□□□ -0.95
PALB2-202ENST00000561514 TTC9BQ8N6N2 239 aa9.1□□□□□ -0.95
PALB2-202ENST00000561514 C2orf15Q8WU43 125 aaKnown RBP9.1□□□□□ -0.95
PALB2-202ENST00000561514 PGLYRP2Q96PD5 576 aa9.1□□□□□ -0.95
PALB2-202ENST00000561514 TMEM209Q96SK2 561 aa9.1□□□□□ -0.95
PALB2-202ENST00000561514 STRA6Q9BX79 667 aa9.1□□□□□ -0.95
PALB2-202ENST00000561514 TSPYL1Q9H0U9 437 aa9.1□□□□□ -0.95
PALB2-202ENST00000561514 ASB7Q9H672 318 aa9.1□□□□□ -0.95
PALB2-202ENST00000561514 TASP1Q9H6P5 420 aa9.1□□□□□ -0.95
PALB2-202ENST00000561514 RPF1Q9H9Y2 349 aaKnown RBP9.1□□□□□ -0.95
PALB2-202ENST00000561514 PARVGQ9HBI0 331 aa9.1□□□□□ -0.95
PALB2-202ENST00000561514 GMEB2Q9UKD1 530 aa9.1□□□□□ -0.95
PALB2-202ENST00000561514 CHD6Q8TD26 2715 aa9.1□□□□□ -0.95
PALB2-202ENST00000561514 CCDC163A0A0D9SF12 145 aa9.09□□□□□ -0.95
PALB2-202ENST00000561514 ESPNB1AK53 854 aa9.09□□□□□ -0.95
PALB2-202ENST00000561514 K7ENM7 598 aa9.09□□□□□ -0.95
PALB2-202ENST00000561514 SLC30A4O14863 429 aa9.09□□□□□ -0.95
PALB2-202ENST00000561514 FOXD2O60548 495 aaPredicted RBP9.09□□□□□ -0.95
PALB2-202ENST00000561514 PPP1R37O75864 691 aa9.09□□□□□ -0.95
PALB2-202ENST00000561514 BMP15O95972 392 aa9.09□□□□□ -0.95
PALB2-202ENST00000561514 NFICP08651 508 aa9.09□□□□□ -0.95
PALB2-202ENST00000561514 CD44P16070 742 aaKnown RBP9.09□□□□□ -0.95
PALB2-202ENST00000561514 ATF6P18850 670 aa9.09□□□□□ -0.95
PALB2-202ENST00000561514 CDC25CP30307 473 aa9.09□□□□□ -0.95
PALB2-202ENST00000561514 ALDH1A3P47895 512 aa9.09□□□□□ -0.95
PALB2-202ENST00000561514 TUFMP49411 452 aaKnown RBP9.09□□□□□ -0.95
PALB2-202ENST00000561514 JADE1Q6IE81 842 aa9.09□□□□□ -0.95
PALB2-202ENST00000561514 DSTYKQ6XUX3 929 aa9.09□□□□□ -0.95
PALB2-202ENST00000561514 Q6ZS52 159 aa9.09□□□□□ -0.95
PALB2-202ENST00000561514 LONP2Q86WA8 852 aa9.09□□□□□ -0.95
PALB2-202ENST00000561514 GPBP1Q86WP2 473 aa9.09□□□□□ -0.95
PALB2-202ENST00000561514 NETO1Q8TDF5 533 aa9.09□□□□□ -0.95
PALB2-202ENST00000561514 CSGALNACT1Q8TDX6 532 aa9.09□□□□□ -0.95
PALB2-202ENST00000561514 CHFRQ96EP1 664 aa9.09□□□□□ -0.95
PALB2-202ENST00000561514 BICD1Q96G01 975 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms