RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 FBXL5Q9UKA1 691 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 CDH9Q9ULB4 789 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 TTC3P53804 2025 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 STAU1O95793 577 aaKnown RBP11.45□□□□□ -0.58
TPM1-229ENST00000561242 CYP11A1P05108 521 aa11.45□□□□□ -0.58
TPM1-229ENST00000561242 BMP6P22004 513 aa11.45□□□□□ -0.58
TPM1-229ENST00000561242 USP8P40818 1118 aa11.45□□□□□ -0.58
TPM1-229ENST00000561242 NOP14P78316 857 aaKnown RBP11.45□□□□□ -0.58
TPM1-229ENST00000561242 CLDN10P78369 228 aa11.45□□□□□ -0.58
TPM1-229ENST00000561242 ADCY1Q08828 1119 aa11.45□□□□□ -0.58
TPM1-229ENST00000561242 HYAL1Q12794 435 aa11.45□□□□□ -0.58
TPM1-229ENST00000561242 LRMPQ12912 555 aa11.45□□□□□ -0.58
TPM1-229ENST00000561242 ADAM15Q13444 863 aa11.45□□□□□ -0.58
TPM1-229ENST00000561242 RAB33AQ14088 237 aa11.45□□□□□ -0.58
TPM1-229ENST00000561242 EXOC3L4Q17RC7 722 aa11.45□□□□□ -0.58
TPM1-229ENST00000561242 ZSCAN23Q3MJ62 389 aa11.45□□□□□ -0.58
TPM1-229ENST00000561242 VWA3BQ502W6 1294 aa11.45□□□□□ -0.58
TPM1-229ENST00000561242 HSP90AA4PQ58FG1 418 aa11.45□□□□□ -0.58
TPM1-229ENST00000561242 RARS2Q5T160 578 aaKnown RBP11.45□□□□□ -0.58
TPM1-229ENST00000561242 RBM43Q6ZSC3 357 aaKnown RBP11.45□□□□□ -0.58
TPM1-229ENST00000561242 ENOSF1Q7L5Y1 443 aa11.45□□□□□ -0.58
TPM1-229ENST00000561242 PDCL2Q8N4E4 241 aa11.45□□□□□ -0.58
TPM1-229ENST00000561242 SPPL2BQ8TCT7 592 aa11.45□□□□□ -0.58
TPM1-229ENST00000561242 ATXN2LQ8WWM7 1075 aaKnown RBP11.45□□□□□ -0.58
TPM1-229ENST00000561242 ACSF2Q96CM8 615 aaPredicted RBP11.45□□□□□ -0.58
TPM1-229ENST00000561242 HEXIM2Q96MH2 286 aaKnown RBP11.45□□□□□ -0.58
TPM1-229ENST00000561242 NECTIN4Q96NY8 510 aa11.45□□□□□ -0.58
TPM1-229ENST00000561242 SEPT5Q99719 369 aaPredicted RBP11.45□□□□□ -0.58
TPM1-229ENST00000561242 ABI2Q9NYB9 513 aaPredicted RBP11.45□□□□□ -0.58
TPM1-229ENST00000561242 AFF4Q9UHB7 1163 aaKnown RBP11.45□□□□□ -0.58
TPM1-229ENST00000561242 HCFC2Q9Y5Z7 792 aa11.45□□□□□ -0.58
TPM1-229ENST00000561242 TET1Q8NFU7 2136 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 CCDC195A0A1B0GUA6 201 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 F8W810 466 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 RBAK-RBAKDNI3L0D1 243 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 ZNF197O14709 1029 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 TGM5O43548 720 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 B4GALT3O60512 393 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 TACC1O75410 805 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 FGF19O95750 216 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 C8AP07357 584 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 TPM1P09493 284 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 HNRNPA1P09651 372 aaKnown RBP eCLIP11.44□□□□□ -0.58
TPM1-229ENST00000561242 LINC00271P0C7V0 271 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 CCDC172P0C7W6 258 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 SPATA31D3P0C874 917 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 KRT5P13647 590 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 CD58P19256 250 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 WARSP23381 471 aaKnown RBP11.44□□□□□ -0.58
TPM1-229ENST00000561242 GRIK1P39086 918 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 PPP3CAQ08209 521 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 SYCP1Q15431 976 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 TCP11X2Q5H9J9 407 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 ANKRD54Q6NXT1 300 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 SPATA31D4Q6ZUB0 917 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 ADGRD2Q7Z7M1 963 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 UNC93AQ86WB7 457 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 FMNL3Q8IVF7 1028 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 SCN4BQ8IWT1 228 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 EHBP1Q8NDI1 1231 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 C3orf58Q8NDZ4 430 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 TAS1R2Q8TE23 839 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 SMG7Q92540 1137 aaKnown RBP11.44□□□□□ -0.58
TPM1-229ENST00000561242 ZNF516Q92618 1163 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 BPIFA3Q9BQP9 254 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 SYT15Q9BQS2 421 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 NT5C1AQ9BXI3 368 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 VPS16Q9H269 839 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 NDST4Q9H3R1 872 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 FAM124BQ9H5Z6 455 aaPredicted RBP11.44□□□□□ -0.58
TPM1-229ENST00000561242 FANCLQ9NW38 375 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 ZDHHC7Q9NXF8 308 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 GCNT4Q9P109 453 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 HESX1Q9UBX0 185 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 NR2E1Q9Y466 385 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 PCDHB4Q9Y5E5 795 aa11.44□□□□□ -0.58
TPM1-229ENST00000561242 COL4A6Q14031 1691 aa11.43□□□□□ -0.58
TPM1-229ENST00000561242 H3BQ06 376 aaPredicted RBP11.43□□□□□ -0.58
TPM1-229ENST00000561242 PPEF2O14830 753 aa11.43□□□□□ -0.58
TPM1-229ENST00000561242 CBFA2T2O43439 604 aa11.43□□□□□ -0.58
TPM1-229ENST00000561242 MED7O43513 233 aa11.43□□□□□ -0.58
TPM1-229ENST00000561242 ATF2P15336 505 aa11.43□□□□□ -0.58
TPM1-229ENST00000561242 CD19P15391 556 aa11.43□□□□□ -0.58
TPM1-229ENST00000561242 AARSP49588 968 aaKnown RBP eCLIP11.43□□□□□ -0.58
TPM1-229ENST00000561242 CLCN4P51793 760 aa11.43□□□□□ -0.58
TPM1-229ENST00000561242 MARSP56192 900 aaKnown RBP11.43□□□□□ -0.58
TPM1-229ENST00000561242 SNX16P57768 344 aa11.43□□□□□ -0.58
TPM1-229ENST00000561242 ROR1Q01973 937 aa11.43□□□□□ -0.58
TPM1-229ENST00000561242 UBXN1Q04323 297 aa11.43□□□□□ -0.58
TPM1-229ENST00000561242 GPR17Q13304 367 aa11.43□□□□□ -0.58
TPM1-229ENST00000561242 CLUL1Q15846 466 aa11.43□□□□□ -0.58
TPM1-229ENST00000561242 TSR1Q2NL82 804 aaKnown RBP11.43□□□□□ -0.58
TPM1-229ENST00000561242 ARHGAP15Q53QZ3 475 aa11.43□□□□□ -0.58
TPM1-229ENST00000561242 SLC8B1Q6J4K2 584 aa11.43□□□□□ -0.58
TPM1-229ENST00000561242 TRIM59Q8IWR1 403 aa11.43□□□□□ -0.58
TPM1-229ENST00000561242 ZC3H3Q8IXZ2 948 aaKnown RBP11.43□□□□□ -0.58
TPM1-229ENST00000561242 NEK11Q8NG66 645 aa11.43□□□□□ -0.58
TPM1-229ENST00000561242 SLC7A14Q8TBB6 771 aa11.43□□□□□ -0.58
TPM1-229ENST00000561242 PGLYRP2Q96PD5 576 aa11.43□□□□□ -0.58
TPM1-229ENST00000561242 CLSTN3Q9BQT9 956 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms